Os03g0640000

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0640000| Description = Patatin family protein| Version = NM_001057275.1 GI:115454278 GeneID:4333539| Length = 1326 bp| Definition = Oryza ...")
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Gene Name

Os03g0640000

Description

Patatin family protein

Version

NM_001057275.1 GI:115454278 GeneID:4333539

Length

1326 bp

Definition

Oryza sativa Japonica Group Os03g0640000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25376833..25378158

Sequence Coding Region

25376833..25378158

Expression

GEO Profiles:Os03g0640000

Genome Context

<gbrowseImage1> name=NC_008396:25376833..25378158 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25376833..25378158 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagctcgccgatggccatggacgcggacaagctcagctacgagatcttctccctgctggagagcaagttcctcttcggcgccggcggcggcgggtgcctgtcgtcggggccgtgcacgccggcgaggccgtttcttggcggcggtggcggcatggacgggcgggtgcgggtgctggccatcgacgggtgcggctcgtcgggcgccggggacgcgctgctcgccgcggcggcgctcgcgcggctggaggccgggctgcggaagcgaaccggggactccgacgcccgcgtcgcggatttcttcgacgtcgcggcgggcgccggcgccggtggggtgctcgcggcgatgctgttcttgaggggccccgacgggaggccgaggtacacggcggaggaggcgcttgagttcgtggctgctagcgtcgggagggactgggccggccggcgcgggcggtgggcgcggctgttccgcggcggcgcgcggggggcggagaggtcgttccggcgggtgttcggcgacgccacgctcaaggacaccgtcgcgccgctgctcgtcccgtgctacgacctcgccaccgccgcgcctttcatgttctcgcgcgccgacgccgtcgagagcgacagctacgacttcgccctccgcgacgtctgcgcggccacctgcgccgccgggagcacggccgccgccgtcaggtcggtggacgggcgcaccgccatcgccgcggcttccggcggcgtggcggccatgggcaacccggccgcggcggccatcacgcacgtgctccacaacaagcaggagttccccctcgccaccaccgtcgacgacatcctcgtcctctccatcggcaccggcgcctccacctccgccaccgcgacgccgatgcccacgcgctccccgtcgccgcgcgagatggcgcgcgtcaccgccgagggcgtggcggacatggtcgacgagtccgtcgccatggcgttcggccacacgagcgggagcagcagcaactacgtgcgcatccaggccagcaaggcggcgaccgcgctccacggcgccgccgccgcgggcgcgatgctgtcgcagcggaacgtggagtccgtgctgttccgcgggcggaggatgtcggagaggacgaacgccgagaaggtggacgccgcggcggcggaggtggtgaaggagcacgagcggcggcggcgcagcccgctgccgaacgtggtgatcaagcaggtgggcacgccgcgggtatcgtcggcgaccacggcgtcgtcggggacggcgaggacggcggcgtcgacgttggcgtcgccggcgtcgtacggctcccgccaatag</cdnaseq>

Protein Sequence

<aaseq>MASSPMAMDADKLSYEIFSLLESKFLFGAGGGGCLSSGPCTPAR PFLGGGGGMDGRVRVLAIDGCGSSGAGDALLAAAALARLEAGLRKRTGDSDARVADFF DVAAGAGAGGVLAAMLFLRGPDGRPRYTAEEALEFVAASVGRDWAGRRGRWARLFRGG ARGAERSFRRVFGDATLKDTVAPLLVPCYDLATAAPFMFSRADAVESDSYDFALRDVC AATCAAGSTAAAVRSVDGRTAIAAASGGVAAMGNPAAAAITHVLHNKQEFPLATTVDD ILVLSIGTGASTSATATPMPTRSPSPREMARVTAEGVADMVDESVAMAFGHTSGSSSN YVRIQASKAATALHGAAAAGAMLSQRNVESVLFRGRRMSERTNAEKVDAAAAEVVKEH ERRRRSPLPNVVIKQVGTPRVSSATTASSGTARTAASTLASPASYGSRQ</aaseq>

Gene Sequence

<dnaseqindica>1..1326#atggcgagctcgccgatggccatggacgcggacaagctcagctacgagatcttctccctgctggagagcaagttcctcttcggcgccggcggcggcgggtgcctgtcgtcggggccgtgcacgccggcgaggccgtttcttggcggcggtggcggcatggacgggcgggtgcgggtgctggccatcgacgggtgcggctcgtcgggcgccggggacgcgctgctcgccgcggcggcgctcgcgcggctggaggccgggctgcggaagcgaaccggggactccgacgcccgcgtcgcggatttcttcgacgtcgcggcgggcgccggcgccggtggggtgctcgcggcgatgctgttcttgaggggccccgacgggaggccgaggtacacggcggaggaggcgcttgagttcgtggctgctagcgtcgggagggactgggccggccggcgcgggcggtgggcgcggctgttccgcggcggcgcgcggggggcggagaggtcgttccggcgggtgttcggcgacgccacgctcaaggacaccgtcgcgccgctgctcgtcccgtgctacgacctcgccaccgccgcgcctttcatgttctcgcgcgccgacgccgtcgagagcgacagctacgacttcgccctccgcgacgtctgcgcggccacctgcgccgccgggagcacggccgccgccgtcaggtcggtggacgggcgcaccgccatcgccgcggcttccggcggcgtggcggccatgggcaacccggccgcggcggccatcacgcacgtgctccacaacaagcaggagttccccctcgccaccaccgtcgacgacatcctcgtcctctccatcggcaccggcgcctccacctccgccaccgcgacgccgatgcccacgcgctccccgtcgccgcgcgagatggcgcgcgtcaccgccgagggcgtggcggacatggtcgacgagtccgtcgccatggcgttcggccacacgagcgggagcagcagcaactacgtgcgcatccaggccagcaaggcggcgaccgcgctccacggcgccgccgccgcgggcgcgatgctgtcgcagcggaacgtggagtccgtgctgttccgcgggcggaggatgtcggagaggacgaacgccgagaaggtggacgccgcggcggcggaggtggtgaaggagcacgagcggcggcggcgcagcccgctgccgaacgtggtgatcaagcaggtgggcacgccgcgggtatcgtcggcgaccacggcgtcgtcggggacggcgaggacggcggcgtcgacgttggcgtcgccggcgtcgtacggctcccgccaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0640000, RefSeq:Os03g0640000