Os03g0641200

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0641200| Description = Amino acid/polyamine transporter I family protein| Version = NM_001057281.1 GI:115454290 GeneID:4333545| Length = 48...")
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Gene Name

Os03g0641200

Description

Amino acid/polyamine transporter I family protein

Version

NM_001057281.1 GI:115454290 GeneID:4333545

Length

4860 bp

Definition

Oryza sativa Japonica Group Os03g0641200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25453603..25458462

Sequence Coding Region

25453603..25454972,25458051..25458462

Expression

GEO Profiles:Os03g0641200

Genome Context

<gbrowseImage1> name=NC_008396:25453603..25458462 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25453603..25458462 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtcggcgatggcggcggcggcggagtgaggcggcgagggtgcgggtgcagcaaggaggacttcttcccggaggagtcgttctcgagctgggaggcgtacgggcgggcgctgcggagcacgggagcgcggctggccgaccggctgacggcgaggtcgctggacgcgacggagctgcacgaggtgcgggcccggagcggcgccgacatgaagcgcgacctcacgtggtgggacctggcgtggttcggcgtcggcgccgtcatcggcgccgggatcttcgtgctcaccggccaggaggcccggaacgccgtcggccccgccgtcgtcatctcctacgtcgtctccggcgtctccgccatgctctccgtcttctgctacaccgagttcgccgtcgagatccccgtcgcaggcgggtcgttcgcgtacctccgggtggagctgggcgacttcatggcgttcgtggcggcgggcaacatcctcctcgagtactgcatcggcggcgcggcggtggcgcgcgcgtggacctcctacttcgccaccctcctcaaccaccaccccaacgacttccgcatccacgccgcctccctcgccgccgactactcccgcctcgaccccatcgccgtcgccgtcatcgccatcatctgcctcctctccgtcctcagcaccaaggcctcctcccgcttcaactacgtcctctccgtcctccacgtcgccgtcatcgccttcatcatcgtcgcgggcctcaccaaggccgacgccgccaacctcacccgcgacttcatgccctacggcccccgcggcgtcttcgccgcctcggcggtgctcttcttcgcctacatcggcttcgacgccgtcagcaccatggccgaggagaccagggaccccgcccgcgacatccccgtgggcctcgtcggcgccatggcgctcaccaccgcgctctactgcgccctcgccgtcaccctctgcctcatggtgccgtacggggagatcgacccggacgcgcccttctcagtcgcgttcgccgaccgtggcatgggctgggccaagtacgtcgtcgcgttcggcgcgctcaaggggatgaccaccgtgctgctcgtcagcgccgtcggccaggcgcgctacctcacccacatcgcccgcacgcacatgatgccgccgtggctggcgcgggtgcacccggggacggggacgccggtgaacgccacggtggccatgctcctcgccaccgccgtcatcgccttcttcaccgacctcaacgtcctctccaacctcctctccatctccacgctcttcatcttcatgctcgtcgccgtcgcgctcctcgtccgccgctactacgtgtccggggagacgtcgcgcgccgaccgcaacaggctggccgcgtgcatcgccgccatcctggcgtcgtcggtggcgacggcgacgtgctgggggctggaccggggagggtgggtgccgtacgcggtgacggtgccggcgtggctggcggcgacggcgagcctgtgggcgctggtgccgcaggcgagggcgccgaagctgtggggggtgcccatggtgccgtggctgccgtcggcgtccatcgccatcaacgtcttcctgctgggctccatcgactccaagtcgttcatgcggttcgggatatggacggcggcgctgctcgtctactacctcttcgtcggcctgcacgcgtcctacgacacggccaaggcgctcgccgccgacgccgtcgccggcaaggtggaggacggcgacgccaagaccagcgcgccgcccatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAVGDGGGGGVRRRGCGCSKEDFFPEESFSSWEAYGRALRSTGA RLADRLTARSLDATELHEVRARSGADMKRDLTWWDLAWFGVGAVIGAGIFVLTGQEAR NAVGPAVVISYVVSGVSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDFMAFVAAGNI LLEYCIGGAAVARAWTSYFATLLNHHPNDFRIHAASLAADYSRLDPIAVAVIAIICLL SVLSTKASSRFNYVLSVLHVAVIAFIIVAGLTKADAANLTRDFMPYGPRGVFAASAVL FFAYIGFDAVSTMAEETRDPARDIPVGLVGAMALTTALYCALAVTLCLMVPYGEIDPD APFSVAFADRGMGWAKYVVAFGALKGMTTVLLVSAVGQARYLTHIARTHMMPPWLARV HPGTGTPVNATVAMLLATAVIAFFTDLNVLSNLLSISTLFIFMLVAVALLVRRYYVSG ETSRADRNRLAACIAAILASSVATATCWGLDRGGWVPYAVTVPAWLAATASLWALVPQ ARAPKLWGVPMVPWLPSASIAINVFLLGSIDSKSFMRFGIWTAALLVYYLFVGLHASY DTAKALAADAVAGKVEDGDAKTSAPPM</aaseq>

Gene Sequence

<dnaseqindica>3491..4860#1..412#atggcggtcggcgatggcggcggcggcggagtgaggcggcgagggtgcgggtgcagcaaggaggacttcttcccggaggagtcgttctcgagctgggaggcgtacgggcgggcgctgcggagcacgggagcgcggctggccgaccggctgacggcgaggtcgctggacgcgacggagctgcacgaggtgcgggcccggagcggcgccgacatgaagcgcgacctcacgtggtgggacctggcgtggttcggcgtcggcgccgtcatcggcgccgggatcttcgtgctcaccggccaggaggcccggaacgccgtcggccccgccgtcgtcatctcctacgtcgtctccggcgtctccgccatgctctccgtcttctgctacaccgagttcgccgtcgagatccccgtcgcaggtaaacaaattaatattaaaccatctactccacaagcgtataatttgcatgatcgagcgctacaagtatttattactacctttttaagtcacgatgcttattaatagctagtggtatcaaataatatgtgaataaaacttccatatgtgtgttttttgcgacttaagatccacagctgcaaaattaacttggatgaaaatacattaaaatcaactcgaaacgtaatataaacatttaaaattcaaattcaaaccttggaggctactcaagattgaattgctcttgatttttttttcagtgaaaagagtatctatcatagtactctgttttttcatcatttacttgattgaaaagttctttttcactgagtagtaaggatatgcatcatttcagctggcctagcttcatggaaaacgaggatcatgtaaattggaagtattctaatgcgatgcatttggaacaaaatagcagattttttttaatatctaaaaaaagatgtagtagaagaaacacaaggtactggctggcaacttggcatgcatgcacaatttagtccatatgaatggccaaattaaccaatagagagaaagtataatatcatttattgttctgaggatgactatcaccacatggcagttgatccaatctgcatttgtttatgtatattatagtactgtaccaatacggcaatacagcatgtcactacctgcaatacagtatgataagggggtataattttatttattttatacctgttcgtcttgtaatgataggtcaacggtggaatcaaccaagtgttgctttctttactgtcaagttgatcggattagtcagagacccactcacattgattcttgaatcttgcagtcctgataccgactgttctttcatttgaaaattactagtgccagaggaaaaaaggatttgtgtctctatgatttgatcatttgaccattcatcgtcaatattccttgaatattgaagggatagttcacacttcatatccaacaagtcggtatcacgaaatataaattataagttgtcgagatttggtcaaattttctgaagtctttttagaggaaaattctgctcttttgtctgactctatgcgtatagttcatttttggatgagcccgtttgaccagatgctgtgtttgtcgaaatagagaggcatagatttgatgattatttagtacattgttgttgaaacctcatcatttcactcatacttatgcttatcagccaaaattagaattttcaaccttaaatttagatttgattttgaggtttttttcatcgaagtttatttttcagcatttgtttatagatcattaaggacacgcatataaaaattttattcataaattatttttcgtttgcaaataaaccgtttggtttattcctagaataaacaaaacgatggaaacttaattatctgcacaagcacatgaccattctcagggaatgtgctttacagtgtagtttcacgaaggatttatcttaccaggggaggggttaccgtaccttgacgataaacctggtaaccaccgcgaacagagaaacattaaagaaagtttataaaaaagttgaatttttctataatttttttgaacttggttgcagtgttttcatgaaattttggtgtcaccaaaattttcaggaattttggaacttttgtttgcacaaatttatttgaaaatttaccaaattataactgaatttgaataaatattgaccaaattaaaaaaagaaaaatgaataaaccgaaaagttcaggtgagatatttgcttgcggggaaggggggaagtttgaaattttataactttcgaacataaattgcaatccttgttggtggggtgactaggccctcactgccaccgtactttggctttaatactatgacactatattaggccttgtttagtttccaaaacaaaaacttttcactcatcacatcgaatgtttggacatatgcatggagtattaaatgtggaaaaaaaaccaattacatagtttgcgtgtaaattgtgagacgaatattttaagcctaattacgccatgatttgacaatgttgtgctacagtaaacatttgctaatgactaattaattaggcttaataaattcttcttgtagtttcctggcggaatctgtaatttgtttttattattaggctacgtttaatacttcaaatgtgtgtccgtatattcgatgtgacaatcaaaaccagaaatttttcccaattaaacaaggcttacatgttaattacacggtagacagatgagaaaatcggtgtatatggattttttttttgtttcacgtttcaaacatatcgaatcagtccctcaaatatcaatttcttaatggagatagaaaagaaacagaagaagaattagtacacaactacacacccagtaaaaaaaaaaatgaatcagctacatgcaatgatgcaaacatgaaactaatcaatttgaaacggggcatatatacataaaagagtaaaagagtaaagtgcattgacggtccttaaacttataggattgtgtcatatacacccataaactcttaaaatatatatttaggtcccataacttatcaaagtgtatcatttagatcccaaattgacacatcccctctacgatcctatgtgacgttgatgtggcaatgccatatggacgtgacatgtcattttcttttttttcttcttttctttttcgttttcttcttattcttcttttttttcacgggtcacagagaaaggagaagaaaggggaaaaagagaagaaaaaaagaaaaaagaaaaaatttaaatgggttccatttgtcagttaaaataatgccacgtatatatgtatggcatgctacatcaacgccacgcaggatcctgaaggagttgtggcgatttgagacatagataacacactatgacaaatccttggaattaaatatgcattttgagagtatatggatctaaatgacacacctcctacaaatttaaggaccgccagtacatttactctaaactagtacatgcattggccatggatgcatggatgaatcgacggatgcgtacgtgcaggcgggtcgttcgcgtacctccgggtggagctgggcgacttcatggcgttcgtggcggcgggcaacatcctcctcgagtactgcatcggcggcgcggcggtggcgcgcgcgtggacctcctacttcgccaccctcctcaaccaccaccccaacgacttccgcatccacgccgcctccctcgccgccgactactcccgcctcgaccccatcgccgtcgccgtcatcgccatcatctgcctcctctccgtcctcagcaccaaggcctcctcccgcttcaactacgtcctctccgtcctccacgtcgccgtcatcgccttcatcatcgtcgcgggcctcaccaaggccgacgccgccaacctcacccgcgacttcatgccctacggcccccgcggcgtcttcgccgcctcggcggtgctcttcttcgcctacatcggcttcgacgccgtcagcaccatggccgaggagaccagggaccccgcccgcgacatccccgtgggcctcgtcggcgccatggcgctcaccaccgcgctctactgcgccctcgccgtcaccctctgcctcatggtgccgtacggggagatcgacccggacgcgcccttctcagtcgcgttcgccgaccgtggcatgggctgggccaagtacgtcgtcgcgttcggcgcgctcaaggggatgaccaccgtgctgctcgtcagcgccgtcggccaggcgcgctacctcacccacatcgcccgcacgcacatgatgccgccgtggctggcgcgggtgcacccggggacggggacgccggtgaacgccacggtggccatgctcctcgccaccgccgtcatcgccttcttcaccgacctcaacgtcctctccaacctcctctccatctccacgctcttcatcttcatgctcgtcgccgtcgcgctcctcgtccgccgctactacgtgtccggggagacgtcgcgcgccgaccgcaacaggctggccgcgtgcatcgccgccatcctggcgtcgtcggtggcgacggcgacgtgctgggggctggaccggggagggtgggtgccgtacgcggtgacggtgccggcgtggctggcggcgacggcgagcctgtgggcgctggtgccgcaggcgagggcgccgaagctgtggggggtgcccatggtgccgtggctgccgtcggcgtccatcgccatcaacgtcttcctgctgggctccatcgactccaagtcgttcatgcggttcgggatatggacggcggcgctgctcgtctactacctcttcgtcggcctgcacgcgtcctacgacacggccaaggcgctcgccgccgacgccgtcgccggcaaggtggaggacggcgacgccaagaccagcgcgccgcccatgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0641200, RefSeq:Os03g0641200