Os03g0644400

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0644400| Description = Amino acid permease| Version = NM_001057294.1 GI:115454316 GeneID:4333560| Length = 4197 bp| Definition = Oryza sat...")
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Gene Name

Os03g0644400

Description

Amino acid permease

Version

NM_001057294.1 GI:115454316 GeneID:4333560

Length

4197 bp

Definition

Oryza sativa Japonica Group Os03g0644400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25610483..25614679

Sequence Coding Region

25610775..25611155,25611295..25611510,25611588..25611712,25611823..25612012,25612208..25612302
,25612621..25612845,25613331..25613514,25614111..25614116

Expression

GEO Profiles:Os03g0644400

Genome Context

<gbrowseImage1> name=NC_008396:25610483..25614679 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25610483..25614679 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagcaccagctcgacgaggagaaccagagagccgcgctcttccactcctctgccccatcttcctctttgggagctgacggggaggaggagagggagactgtgccgctgctgtcctgcaagatggccgacgataaatctgacactgtccaggtctccgaggatacggcgcaccagattagcattgatccctggtatcaagttggattcattctgacaaccggggtgaatagtgcatatgttctgggatattctgcatcaatcatggtccctttaggctggattggtgggacatgtggcttgattctagctgctgcaatatccatgtatgcaaatgctcttcttgctcaccttcatgaagttggtggcaaacgccatatcagatacagagatcttgctgggcacatatatggtagaaaaatgtattcgcttacatgggctctgcaatatgttaatctattcatgatcaacactggccttatcattttagctggtcaagccctgaaggcaatatatgtattatttagggacgatggagttctaaagctaccctactgcatagcattatctgggtttgtctgtgctctttttgcctttggaatcccttatctgtctgctctcaggatttggttgggattatcaacagttttcagtctcatctatataatgatagcatttgtcatgtcgcttagagatgggattaccacacctgcaaaggattatactattcctggatcacattcagatagaatcttcactacgataggtgctgtagcaaaccttgtgttcgcttacaacactggaatgctcccagaaattcaagcaaccataaggcctcctgtggtcaagaatatggagaaggctctatggttccagttcactgttggttcgttgcctctttatgctgtcacctttatggggtattgggcgtacgggtcctcaacatcaagctatctactgaatagtgtgaagggaccaatttggataaaaactgtggcaaatttatcggcgtttcttcagactgtcatagcattacatatatttgcaagcccaatgtacgaattcttggacacaagattcggcagtggacatggtggtccttttgcaatccacaacataatgttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctccccttccttggcgacttcatgagcctgacgggtgcactcagcacctttcccctgacattcgttcttgcaaatcacatgtacctcacggtgaagcagaacaagatgtccatcttcaggaaatgctggcactggctgaacgttgttggcttcagctgcttgtccgtcgcagctgcggttgctgcggtgaggctaatcacggtcgactacagtacataccatttgtttgctgatatgtga</cdnaseq>

Protein Sequence

<aaseq>MDQHQLDEENQRAALFHSSAPSSSLGADGEEERETVPLLSCKMA DDKSDTVQVSEDTAHQISIDPWYQVGFILTTGVNSAYVLGYSASIMVPLGWIGGTCGL ILAAAISMYANALLAHLHEVGGKRHIRYRDLAGHIYGRKMYSLTWALQYVNLFMINTG LIILAGQALKAIYVLFRDDGVLKLPYCIALSGFVCALFAFGIPYLSALRIWLGLSTVF SLIYIMIAFVMSLRDGITTPAKDYTIPGSHSDRIFTTIGAVANLVFAYNTGMLPEIQA TIRPPVVKNMEKALWFQFTVGSLPLYAVTFMGYWAYGSSTSSYLLNSVKGPIWIKTVA NLSAFLQTVIALHIFASPMYEFLDTRFGSGHGGPFAIHNIMFRVGVRGGYLTVNTLVA AMLPFLGDFMSLTGALSTFPLTFVLANHMYLTVKQNKMSIFRKCWHWLNVVGFSCLSV AAAVAAVRLITVDYSTYHLFADM</aaseq>

Gene Sequence

<dnaseqindica>3525..3905#3170..3385#2968..3092#2668..2857#2378..2472#1835..2059#1166..1349#564..569#gaacggatggctcggcccgggacttatcgcggggggagggggatcggatcctaacgggaaagacgggaaaatctccggcatcgccgccaatttctcccgcacgccgcggcgctgctccccctcccctacccacacactccaccaccatcaccaccaccaccaccacccgcacgcgcgccgcaacaacctcactactgcctatcctacctatatggcacggggtgtgggtccctccgattcccccgccacgccactcctctcccctccccacgcaaccgccttcctccgccgccgccgacgccgacgccgacgccgaccccttctcccaatctgcggattccagcgggggtcccccccccctcccaccggcggcgcccggtggtcgtggtcgtgggggaggggagtcaacgaacgagccgagccgcccgcttgccggagctctctatctatctctctatctctatctctatccctccagattccctcctccatcgaatctctgatatttggagggagcgactcgacgcagcatcgcatcgtaaggaaggtcccctccactgtcgatggatgtgaggtttctttccaattttttttcttcctttattattaattattaatctctctctcgctcacaagcataccatgcgtttcatgtgccattatgcctcatcagtttgatatgatatacggtatggatggtctctagtctctgtcatcaatcgatcgcatttactacatagatatggaactaacatggaagaaaaagttgtcagattcttttcctccaatctgtattaggaaaaataatttgtcatcagttgatcgcatttaatacatagatatggaactaacagggaagaaaaagatgtcaccagttgattcttttcctccaatctgtattaggaaaaataagttgtcatcagttaattatttgtatttttcgtaataagtgtgtgtgtggaaaggacattcctccaatttgtattaggaaaaataagttgtcatcagttaattatttgtatttttcgtaataaatgtgtgtgtggaaaggacagggaagaaaagaacttgcaaaagtgtaattgcaaggcaattgatttgatgctacttttgtgggggtgctcctgtttatttatatatatgcctattcttttgcactaagcagcagcaccagctcgacgaggagaaccagagagccgcgctcttccactcctctgccccatcttcctctttgggagctgacggggaggaggagagggagactgtgccgctgctgtcctgcaagatggccgacgataaatctgacactgtccaggtctccgaggatacggcgcaccagattagcattggtaatttttcatcaaccgttctttgttaatgtctaggcgaatgtcttatgaatgatcgtgtgatgtgttctctcctttcttttcataattgcgatccttaagtcttcctagcctcctagttgaacaccacggcgcctgcatatatttctcctttcttttgtcctcataacctatcggacaaatagacactggttgttccttagccacagataggtaaagaaaaagaagatctgattcatattcatcatcttgaggcctaattcattaaaagagctggaacatgaagcaatttccttttgtctttaatttcttacaattttcagttgtggctcttcttactgcttttagctgttccctctgaaaatataaacttgatgcagagccacagaccatgggttgtcattttggcttaaaaaaaacattgaccttatgtggtgcgtatgattattgattgacttacgaaacactttttttttcactttcagatccctggtatcaagttggattcattctgacaaccggggtgaatagtgcatatgttctgggatattctgcatcaatcatggtccctttaggctggattggtgggacatgtggcttgattctagctgctgcaatatccatgtatgcaaatgctcttcttgctcaccttcatgaagttggtggcaaacgccatatcagatacagagatcttgctgggcacatatatggtaaatattaatacactcagttccctcatttggcaaatattcgataaggcatagtttcattctctttcctttttttctttaactgtgcatgtttcttaatcattcccctcacaccatattttttgtatttcatactatttgaatttctttccttttttttctttaactgtgcatgtttcttaatcattcccctcacaccatattttttgtatttcatactatttgaattggttatgaaaaacttgctctgggttttgtttattaataaaaaaatggtaattttgcttttgcagtatgactgaattacctttatttcaggtagaaaaatgtattcgcttacatgggctctgcaatatgttaatctattcatgatcaacactggccttatcattttagctggtcaagccctgaaggtacagagcaatcaccatcacccaactcttcttatggtgaaatgccgtgttatttcataacaagagttgggcccttctattcattatctcagtatctaagtttagatttttttttctttttgggaatacacatgttgaatttcactgggaaatctttttccctcctggactcatttgtgaacttcctttctgcaggcaatatatgtattatttagggacgatggagttctaaagctaccctactgcatagcattatctgggtttgtctgtgctctttttgcctttggaatcccttatctgtctgctctcaggatttggttgggattatcaacagttttcagtctcatctatataatgatagcatttgtcatgtcgcttagagatggtattatactttggttccttgttcatctgtccttaatttcttgtgcatttccatttgttggcataacaagctactcgtacaaaaatttcattactggttttcttttgaagggattaccacacctgcaaaggattatactattcctggatcacattcagatagaatcttcactacgataggtgctgtagcaaaccttgtgttcgcttacaacactggaatgctcccagaaattcaagttagtcagtttagtacatatggccagtgactagtttatttaccatgatattaccttatgtgtattatatattgcaggcaaccataaggcctcctgtggtcaagaatatggagaaggctctatggttccagttcactgttggttcgttgcctctttatgctgtcacctttatggggtattgggcgtacgggtcctcaacatcaagctatctactgaatagtgtgaagggaccaatttggataaaaactgtggcaaatttatcggcgtttcttcagactgtcatagcattacatgtatgtccaccttactatatatctagtccaagctacattattgtcaattagtaatggttatttctttttcaatttgatttgtttataatcaaattgacactcaatgaagtaacatgaggtcgttttctatatatgccagatatttgcaagcccaatgtacgaattcttggacacaagattcggcagtggacatggtggtccttttgcaatccacaacataatgttcagagtgggtgtcagaggaggctacctgaccgtcaacaccttggtggccgcgatgctccccttccttggcgacttcatgagcctgacgggtgcactcagcacctttcccctgacattcgttcttgcaaatcacatgtacctcacggtgaagcagaacaagatgtccatcttcaggaaatgctggcactggctgaacgttgttggcttcagctgcttgtccgtcgcagctgcggttgctgcggtgaggctaatcacggtcgactacagtacataccatttgtttgctgatatgtgaggctggaaagtgcaagcatgcagccctggatcagctgtaaattcgtcctcttcttttttatttttttggttaggggatgcatgtaggtcgatagaatgatggagattgcaataaataatttggctaaaatgttgtccagatttggttgtttgaggtgcaagatgtttgcctcaaaacgtaccgctatggttcactttttaagaactgtactgctacctctgtttgcggagatttttgtctgcaggcatgcaggatgaatattattcaagtgctctaatagtttgatctcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0644400, RefSeq:Os03g0644400