Os03g0648300

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0648300| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001057313.1 GI:115454354 GeneID:4333579| Length...")
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Gene Name

Os03g0648300

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001057313.1 GI:115454354 GeneID:4333579

Length

8018 bp

Definition

Oryza sativa Japonica Group Os03g0648300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25876546..25884563

Sequence Coding Region

25876808..25876938,25877420..25877912,25878894..25879007,25881119..25881346,25881796..25882041
,25883081..25883222,25884407..25884561

Expression

GEO Profiles:Os03g0648300

Genome Context

<gbrowseImage1> name=NC_008396:25876546..25884563 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25876546..25884563 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctactattctttctctcctctcgctgttcccgacggaggaagggtggcagtggcacgcacgcacgccggcctcgcctcagcctcgcctcctcgcgcgcgcgcggccggacgggaggcacacggtgcgcggccggccggcctcattcgctcacctcgtcattgaactatataaaaaggttgtttgtcatgggtatttcatcgaagtggtttaaatcactggttggtataagaaagcaagaaaaggcccggaatgcagaaaaacaagaaaaggcacaaaatgcagagagctgcgaaacaagcacccctgctgctcagttgcttcacaaacggaaacattctttggatactgaacgtgcaatcttagtagaagaacttgcagtgcaaagtgaaccattgactgatgacaccaacacgcagacagtttcagattccatttcttcagacagtacattgcttggagtacatatttctcaaaccgaagagcataaaactaaagaggatgtggctgcaacactcattcagtctgcgtttcgagcattcctggctagacgggctttacgggcattgaaaggaatagttatactgcaggcccttgtaaggggtcatatcataagaaagcagacatcagaaacacttcagtgtatgcaagctctagtaagagctcaagctcgtgtcagagcaagacaagttcgtgtttctttagagaaccaagttgcacggaagaaggtccctgaacaagatgatcatgagaatcatgttcgagaaattgaggaacgctggtgtggcagtattggttctgttgaagaactgcaagctaaagtattgaaaaggcaggaagctgctgctaagcgtgagagagcaatggcatatgctttgactcatcagcgacaagcaggttccaggcaacagaaacctacaactccgcaaggacttgaacttgatgacagccactggggatcaaactggttagagaggtggatggctgtacgtccatgggagaacaggttgcttgacagtaacaccaaagaaactatgccactgtgtgatgataagcaggatatggaaacaaagtctcagatcacaccaaaggggaaagttcaagtttcaagtgccctttctaatggttctaacaagaagaaaggcataaaccataaaaaatcatattctgatgtaacttgtgcttcatttggacggtcgccaaatataccttcaacatctttgggatcatgcaaacaaaagtcaaagctttcagatgaagctttggaagaagtcagctcccagccaacagatcttgcgtctttgtccacatgccaaccaaaagccaagcttgtgcaagcgaatactccagtcaagaagtggttatctctgccaactaatgttggtgggggagcagcaaagggcgcgaccaacagcaactcgatttgcagatccaccagtgccaagtctgatccaaaaccacgggcaaatgcttctaaccaatccaggaagcaagttgagttgcaggcctga</cdnaseq>

Protein Sequence

<aaseq>LLFFLSSRCSRRRKGGSGTHARRPRLSLASSRARGRTGGTRCAA GRPHSLTSSLNYIKRLFVMGISSKWFKSLVGIRKQEKARNAEKQEKAQNAESCETSTP AAQLLHKRKHSLDTERAILVEELAVQSEPLTDDTNTQTVSDSISSDSTLLGVHISQTE EHKTKEDVAATLIQSAFRAFLARRALRALKGIVILQALVRGHIIRKQTSETLQCMQAL VRAQARVRARQVRVSLENQVARKKVPEQDDHENHVREIEERWCGSIGSVEELQAKVLK RQEAAAKRERAMAYALTHQRQAGSRQQKPTTPQGLELDDSHWGSNWLERWMAVRPWEN RLLDSNTKETMPLCDDKQDMETKSQITPKGKVQVSSALSNGSNKKKGINHKKSYSDVT CASFGRSPNIPSTSLGSCKQKSKLSDEALEEVSSQPTDLASLSTCQPKAKLVQANTPV KKWLSLPTNVGGGAAKGATNSNSICRSTSAKSDPKPRANASNQSRKQVELQA</aaseq>

Gene Sequence

<dnaseqindica>7626..7756#6652..7144#5557..5670#3218..3445#2523..2768#1342..1483#3..157#gtctactattctttctctcctctcgctgttcccgacggaggaagggtggcagtggcacgcacgcacgccggcctcgcctcagcctcgcctcctcgcgcgcgcgcggccggacgggaggcacacggtgcgcggccggccggcctcattcgctcacctcgtaagccttcctcctccctcctccgtgcggttccatgatgcggcgaggcgaggcgcggattggggttggattggtttcttttttttttctcttccaattattgacttcgatgctgcgtgctcgccgtgctgtgctgtttcttccggatttctttgatgcgcgctgcagtgcttaatcgagagggttttttttttgtttttcttcgaaagggtttcaaccgaaataccgaatccccctctgcccccaaagctggtttcgtttgaggtgtagccgcatcttcctcttttctttccttttttatttttgggtgagggtttggagtgaatcttctatcttgcttttgcttcctgtgtcgaatgcttggagttcttttgctggaaaattcttcatgaatatctagcaccatttgcagcttcaaagcagtacgggctctgttcatcggtgtaatgcgttcgtattttgcttccttcaaatcttcatcctgtcttgcattttatatcgcccgcattttctgaagttctctgagctaatgtggagtcggatatggatttagggtgatctgatttgatgacggtttttatggtttttttcttttcaatctgatgcgcacaatagtttgtgcacggacaataattaagctaacggttagcaattatagcatttggtatcaacattttcattacgagtttcatgccagtctagatggtactgtgtacttgtaagttctcagtgacaacgagaaacagcagaaggatgactacttccagtaaaccacttaatcatttagattcagtccgatcaaaaaaaatcatttagattcagtgattttctgtctgcttcgatgagatttagtaaaccacttagattctgtattgcatcgccgttaatcattttatttgttaatcattttatttcataatttcttgtagctatgctttttttcttttcatggttcatgtgattatgtgaaggctcttgaatattttggtttcttgtttcaacaagttgtgtgtgttagctcttcctctactattgctatccgttgcttgaagttctggcaattgtgatgttgactatcagcaagttcctttactatacacactatttgttccttttcataagtcttaagcagaaggtacgattgctcatttgtatggtaagcatttcaatattctgaaatgcaggtcattgaactatataaaaaggttgtttgtcatgggtatttcatcgaagtggtttaaatcactggttggtataagaaagcaagaaaaggcccggaatgcagaaaaacaagaaaaggcacaaaatgcagagagctgcgaaacagtaagttatggtattcaccaagattttgtatcgtgtaattatgtagcaagtacttgttctgatcgactaagtctggagtaatgattgttttgtctgtcttcaacttttttccttttttttgtttctagtgtttagagccagcttgataggtggatattctactgttttttgtcttcctctgtcagaacatgacaaatcttgaagagtgagcaaaattgcaaaagagtagatggtttaccagagttggttcggcggatgccacacaagtgctgttgttgacatgtcgttgtcacatgcttgttgcacaactactcttctgagtgcccaacacagattatgtggcaatacctggatattaaatgttctgtattggtgtagtaaatgtttgggctccttacaatatgccattaccatcattgttctagtgcttgtaaccctcctcacctatgaaagaaaaccaaatgggtatattggagtactgttgtggttgctttggtttttagtgtcctactggtctggtaattacagatagaggaatgactgattgttttgtgtaaccaacaaatgattgcactgctgtttattccttgggtgtctgtctttttttcttgacttcttttcctttattctacttcgcaatgcattactatgcaaatgcatcagccactgcccactggagtgttagctatttatttaaatgtagcatgtctaacttgcttggattaaagaccgttattgtagttgtaataggagtattcatgctgttcattttgtttacttccattcaattaaataaaattttaaattattaatatgatatatattgtagtttagtatcgtagtatgtgtttcatgctgcccttgcccaaagtatcactttataagcttgatttcaaactaccagagtgcattagtatgttttaagttttgagaacatattccttcttgactctttttgccactgctgtacaagttggcatgaactgctgtttttactgggctgtcttaccatcatgacaatgtattaaaattattgtagagcacccctgctgctcagttgcttcacaaacggaaacattctttggatactgaacgtgcaatcttagtagaagaacttgcagtgcaaagtgaaccattgactgatgacaccaacacgcagacagtttcagattccatttcttcagacagtacattgcttggagtacatatttctcaaaccgaagagcataaaactaaagaggatgtggctgcaacactcattcagtctgcgtttcgagcattcctggtatgctccctttgaatatcactatgctagataactgatagcatgctgtctctggtctctgctctgcatgtatagtaaacacactaatgagtgtgactgtcttcatgttttgaggacttatccaaataaacaatgcagaaattgtcagaatgtgataagagcaaatgtattatatttgaacaagataatccaagaaaaaggagaaagtattttagtacttagaggttctagttaatttttcaaatatctagaaatagtcacatgaaactgaatcttcatttgctaaattaaacttaggaaactatccagatgtagtcgtttgtgtataacatagcatagactatgaaagcaaaaggctttagtaaaaacatagctcatgattttcaggcttccttcatagtcttctgtgtttgagaatttgaactttttgttgcatttatgattaccaggctagacgggctttacgggcattgaaaggaatagttatactgcaggcccttgtaaggggtcatatcataagaaagcagacatcagaaacacttcagtgtatgcaagctctagtaagagctcaagctcgtgtcagagcaagacaagttcgtgtttctttagagaaccaagttgcacggaagaaggtccctgaacaagatgatcatgagaatcatgttcgagaaattgaggtaggtcacaaatcctataaaagtcattatgacaagatactgagacctatatgcttggatgtcttttcctctcctgactctacatatcttgacacataatctttcttccatcgtatagattatcaccttgttataaatttatcgagtgatatgatactgacatgtaaattttgctcaacactgtggataaaaaaatatttctgctccctccctacttatttgaagatggcactttttttaatagctatgttgcaatggaaatttaaaaagaaaaccccactgtacactttaaagccctaaaaattaaaataaaatcattcctatcgtaaaatcttcatgtaatatttatcatcattttgcacctcattttaagataaaatttcctcactattttacttggggttaggaaagtgacacaagtccacctacctcactattttagggacctacatggcagtggtggtgggtggtggcagatttaccactcaccactaccattgtggtctttctaaaggagtacagaaagagagcagatcatatattaatccgactttcaagaaaaccaaggaaatcacattgtcttcacaggacaggaaaacaagcaaaagtaaaccaaacatttggtacttgacaacttcaaaagatcccctggcaacaactccaaaccacgactgcctactgactaaacaccatgatagaagcttcacatcacatcagggagatcatttgtcttcacttctctcactcacatcatcaatcttgtaacccactcgtccaatgcctcctttccttcctctttttgcaaaagtacgctagtgctgcacaaaagacagattcataagcaacatgcaaagccaattttactaacacgatctcaattacccagtcgatcctagtaagccataatgatcagcagatacttgccagcagccaaactctggcaaaaccccctggcctcaaagacagagcaccacttatgtcatagatgatcacattatgacgcaacacatctctgacaacacaccacacaaaccttgctaagggtcacaagaacagggtgtgattgatagtttctctctttgaacataactagcacaactcactcccctccactttcttcttggggtgtcttttcttgttcttttcttcttttctttcttttctttcttctttttcttttcttttctattaactgaacaacacattgagttctatcactaacagctaggaaaagaaaatgtttgagtttcaaagatattctacttttccacacttccatcatctcttgatcaatctcccctccaaaagttagcaatccgtacatagattttgaagaataacctttttctgctcatgaggccaaataaatctgtcaggatccccatctaaactaatctctcctatcagctctatcaatttgcttaagttgtgttgaccctctgaagattgggaaacacgttttgtgtttgaagatggcactttttgtgtggaaacaatatatgttaagaaacgtgactatactattatgcaagttacaaacaattccttgcaccataggattggcttaagtttcatgcctataccattctgggtaaagccagacctcaacctggctagatcatggtgcagtccgtaggggagatgggatggtgatgagcactggcgaaggaggttgtagcaacaatggcatcagtgccattgtactgcactactgctagtatcagatggatttggacagagtggggaggcagagggtgggttgggattaagaaaacaaaatcatgcattactgctagtatcagatggatgtaaatggagtgaggaagcagaggatgggttaggttaagaaaaaaaaagcttggggttgacttggccttgagtcgacacctatataatattcagcttttgtgtggtttatccctaacgctttgaatgaatagtgggttatattcatccattaactgttctttgtagcattggaataagtcactgcctgttgtaccaataacttacgtgtggaaaaatagaaccaagtaatatgagtgggataaatatgtttcttggcagacagtgttttataatgttgtttacttctgcaacaataaatgcaggaacgctggtgtggcagtattggttctgttgaagaactgcaagctaaagtattgaaaaggcaggaagctgctgctaagcgtgagagagcaatggcatatgctttgactcatcaggtaattttggatggtatacctatatacttctgtacaaatactggttgagagttggtaagtgaggtaaactttgattagtagattagtagtctagcactcaatgctttgttaaatatgtgtgttattatagtcaattagttaggaagtcaatgtgataatcaagaaagatagttgtggataatggattttatctacttaataattggtgggtaactgatatttaagttacttaatgacagtatgttacatgtttactctggttgcaatttattcaatatatctatctaaacatagatttaaaaagtgatggtctgagtgaaataactgttgtgataaataacagtagtatcaaatactgatttcatatgtatttatgtttacctgaaatatatcattttttgctagatgctgcttatctatataattaaccagtaacatgaatgacgcctcatactttttgtgggctagaagtccctgcagtaatcagtgaaataaaaaatgatagaaatcatctcatcgaatgagaaatggagaaggactgctacagatatagatagtacaactattacagttatataacaagtattactatattttcagtcatagcatttcagttgtctagtgaatacaattgtatctccaaatttagctgttcggttcaaagtgcaatttttctagtcatatgatcatatcatagtaaactgcagaaatacacttatctaggtgttgctcgtgtcattcttttcactgtgaatctatatgtttatcggataaatcacagtagatcagactttttagatgccctctgtaatttttagtttcaactaatgatcatggaaaattatctgttgcagttgagaacttaagatttgagaatgctcttatgaatataacaacactgcatgtccccacaattctgtagtccttttcaatatacgtttagctctggagtcattaagttatgccttttgttttggtcagcgacaagcaggttccaggcaacagaaacctacaactccgcaaggacttgaacttgatgacagccactggggatcaaactggttagagaggtggatggctgtacgtccatgggagaacaggttgcttgacagtaacaccaaagaaactatgccactgtgtgatgataagcaggatatggaaacaaagtctcagatcacaccaaaggggaaagttcaagtttcaagtgccctttctaatggttctaacaagaagaaaggcataaaccataaaaaatcatattctgatgtaacttgtgcttcatttggacggtcgccaaatataccttcaacatctttgggatcatgcaaacaaaagtcaaagctttcagatgaagctttggaagaagtcagctcccagccaacagatcttgcgtctttgtccacatgccaaccaaaagccaagcttgtgcaagcgaatactccagtcaagaagtggttatctctgccaactaatggtaaacacaatatcgataacttatacatatttttttttctcggttttgtagtagtcttgttattggcaataattcagaaatctgttggacattatttggaacccttctctcctaaggaaaccatatactgtagactaccaagtagtgtttgctgcgagagttttttttttagtttaaatatttttataccactaatttaggtgttcaaatggtgcaatttttttccatattccattggcaagtaagcgtcatattacaaaaacattttttctgcaagaaggttgtacagctctttagttgatcagctgcttgggcccttgccgccttaggtttccattctcattctgattgttgtatgacttccatgtttgctatgcatcattctagaaacttgcttctcatctccttttgctttcatgtatttactcgaaaccaacaatgttgtaattcagcaagccatttattatgtgtgcattaacagttggtgggggagcagcaaagggcgcgaccaacagcaactcgatttgcagatccaccagtgccaagtctgatccaaaaccacgggcaaatgcttctaaccaatccaggaagcaagttgagttgcaggcctgattgcacattcccctttccctctgacttcggtaagtcatttcttatttgctgtcctccagctgtgcatgctacttctatgtacataatttttttccaagaaaagaatactgtatcttagatcttggttggtggtgtgtttcgtatttttcttgtgcacggttgtgggtatgtcgtgccatatttttcttttgcatttccatcagtttttttaccctcttgtatgttgttgtgagttttgaaagaaggaactatgttatgtctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0648300, RefSeq:Os03g0648300