Os03g0648900

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0648900| Description = HAD-superfamily subfamily IE hydrolase protein| Version = NM_001057316.1 GI:115454360 GeneID:4333582| Length = 3840 ...")
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Gene Name

Os03g0648900

Description

HAD-superfamily subfamily IE hydrolase protein

Version

NM_001057316.1 GI:115454360 GeneID:4333582

Length

3840 bp

Definition

Oryza sativa Japonica Group Os03g0648900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25902857..25906696

Sequence Coding Region

25902859..25903092,25903174..25903237,25903358..25903490,25903899..25904022,25904477..25904533
,25904607..25904703,25905010..25905217,25906028..25906088,25906184..25906237

Expression

GEO Profiles:Os03g0648900

Genome Context

<gbrowseImage1> name=NC_008396:25902857..25906696 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25902857..25906696 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccctcctcctcctcctcccgtctcctcctcctccgcctcctcctctcccgccgccggagccccgcctcgcgctcccctcctcctcccctccgccgccgcctccctctcctcgctgcctccatgtcctcctcctcctccaccgccgccaccagaaaccccggctccgtcgtcgccgacgccgacggcctcgcccgcaaggtcgccgccatccgcgccgccggccccgctaagctccaggtcatcgcggacttcgacggcacgctcacgcggtactggtacgacggctcccgcggccagagcagccatgggttgctgaggcaggggaacgaggagtacgacgccaagagggaggagctgttcgagcactaccaccccatcgagatctgccccgacatcccgctccccgagaaggccaagctcatggaagaatggtgggagaagacacatgctctccttatcgaaggtggacttacatatgaagctataaggcaatctgtggctgatgctaaaatcacttttagagatggagtggtgaagctctttgagttcttggaggagagagatattccagtattagtattttctgctggacttgcagacataattgaggaggtcttccggcagaaactccacagatcattcaagaacattaaggttgtgtccaacaggatggtcttcaatgaagaaggtcgtcttgtttcatttaaaggaaagactattcatgttctaaacaaaaatgagcatgccttggacatggcagctccagtgcatgacaatttgggtgatccaaatggatatactgatgactattcgttggtgaagaagaggaccaatgtgcttctccttggagatcacattggcgaccttggaatgtctgatggtctaaactatgaaaacaggattgctgttggatttctgaacaacaacatcgagaaatctctaaaagattactccgaggcatttgatattgtctacttgaatgacgcgccaatggtgggagttgttgagcttgtatctgaactatgtccttaa</cdnaseq>

Protein Sequence

<aaseq>PSSSSSRLLLLRLLLSRRRSPASRSPPPPLRRRLPLLAASMSSS SSTAATRNPGSVVADADGLARKVAAIRAAGPAKLQVIADFDGTLTRYWYDGSRGQSSH GLLRQGNEEYDAKREELFEHYHPIEICPDIPLPEKAKLMEEWWEKTHALLIEGGLTYE AIRQSVADAKITFRDGVVKLFEFLEERDIPVLVFSAGLADIIEEVFRQKLHRSFKNIK VVSNRMVFNEEGRLVSFKGKTIHVLNKNEHALDMAAPVHDNLGDPNGYTDDYSLVKKR TNVLLLGDHIGDLGMSDGLNYENRIAVGFLNNNIEKSLKDYSEAFDIVYLNDAPMVGV VELVSELCP</aaseq>

Gene Sequence

<dnaseqindica>3..236#318..381#502..634#1043..1166#1621..1677#1751..1847#2154..2361#3172..3232#3328..3381#cgccctcctcctcctcctcccgtctcctcctcctccgcctcctcctctcccgccgccggagccccgcctcgcgctcccctcctcctcccctccgccgccgcctccctctcctcgctgcctccatgtcctcctcctcctccaccgccgccaccagaaaccccggctccgtcgtcgccgacgccgacggcctcgcccgcaaggtcgccgccatccgcgccgccggccccgctaagctccaggccagcgccgacgaaccctcctcctcctcctccatttttgtcaatatcttgtggactgactagggtttggagttgccgcaggtcatcgcggacttcgacggcacgctcacgcggtactggtacgacggctcccgcggccagagtatgggtgctcttcgcttctacagtctctagtttgattcgcttgatgaaattccagtggcttttgacatttttgtttggagggagtttgagaggtgtatgtgtgtttatgtggtggtaggcagccatgggttgctgaggcaggggaacgaggagtacgacgccaagagggaggagctgttcgagcactaccaccccatcgagatctgccccgacatcccgctccccgagaaggccaagctcatggaagaatggtgaggaagtagtttagtgagtagtgctgcaaatttccaccctattatcctttggtacaccgatcaggtggattctgttgtggtcaagttctcaagtcccagttggacatatttgggaatttagcatttaagtgatgacgaagtgagagtggtgctgcatacaacatttgattttgatgcttatgcttcttcatatgtcaagcttaaatgtgttgcatggattgcaatcggagtggaagcctttctttttttttttttcagattttgtgcaatcttgatgcgcttgtgatatttccatgccattcatcagttgtccagcaaataccatgattgaatgttcagtgtaggcacattgcctgcagattattcacgaagtctaatcagtcctgatgccattacttgctacaggtgggagaagacacatgctctccttatcgaaggtggacttacatatgaagctataaggcaatctgtggctgatgctaaaatcacttttagagatggagtggtgaagctctttgagttcttggaggtttggttttcttttgctgttgcagatttgggttaagttctaaagtttaaagggggatgcaaattgtgttgtatactcctttggaacatgcacatagtattttggattcactatatttggtaaataatcactaaaaacaacgagtacactaatatattatattaattgatgacaacaacgaagcttcttcatatatacaaatatattgaaacacgcacaagtttctgtctcttacccctttctttcatacctactcgcaatatcaatgatctattctcaaatgtgaagacagctgacaaccatcatgggtgttacttttgtagtgtttgtttcttttgactttaagctagttcgactgaacttaccagtttgcagcagttatttgggtacttctcatacaccagcatatttgaagcagaggtagtctgataaaacttctcaaatgtaatttcaggagagagatattccagtattagtattttctgctggacttgcagacataattgaggaggtaagtactacaaagtcctcatatgatgagatgagctttggttgcagactgacacacctgctttgtcttctaggtcttccggcagaaactccacagatcattcaagaacattaaggttgtgtccaacaggatggtcttcaatgaagaaggtcgtcttgtttcatttaaaggtgatattgtaatcatcatttattcatccaatgaattatcatttgaagtaatgcaggatatatgcattaaatgaattctctacctccctgaagtttgttgcctggggtatgggattgctgttacttgacaatatttggctcttttgattgagacataatttgactggcatattcatgtcaatatggatgggtcaatccctttttttctataccatcttttgcaattgatgacttaggttattgattgtttgtctacatcaagtacttaaagacctgtgcattgaaacaaactatggtgtaatgtaggaaagactattcatgttctaaacaaaaatgagcatgccttggacatggcagctccagtgcatgacaatttgggtgatccaaatggatatactgatgactattcgttggtgaagaagaggaccaatgtgcttctccttggagatcacattggcgaccttggaatgtctgatggtctaaactatgaaaacaggattgctgttggatttctgtaagtagacttccttatcatcttgctttttgcttaccatttttagatttatcttctgctgcatctatagcttagtttatccccatggatctagactgtagagtactgaatttttactttgatactgtgggcatcttggtgccagtgaaatttgattagttattccgatgcaatgagcgaagttctgaacaatccataggttgcattgtttctgttgaacatgcttttggcctaatatctttcaattgtaagctctcattggaagttctgagcaaatcctgagacttgtcaacgcatgaggaaatacccaaactttaagttgaatttttcattcccagtcatctttattaggcttattgtgttgaataagtgcaattagatgcaccaaattcattacttatgtgcaggtgtcattctcttctaattcaattgctgtacaagattaactaagctaagctgtacaagataaacaaagtataggtttggtccgtaagaactctctctaaagaaaaaaaaagttttttttttggtttgaaaccaaagttgagcaaccacagaaagtccatgtttgtgttctactggctttccttaatcaatgcaaagccaatgttttatcacatgcaactcgcccactgtaagtttttcttcgaattagtgacatgcataattaaccaaagatggtagttcgctggtcaaactgaatgcaagtggaaaaattgctaaaacccttttaggaactttgttgtttaccaggcacagttgttattgctgtacaagtttatgtatgaattaacacaacttgtttcacaggaacaacaacatcgagaaatctctaaaagattactccgaggcatttgatattgtctacttggtgaggcagcttttgcatatcagaattattgctagccatataattcatttttccatccttacatgttctacttttgatatatcaattcaatgcagaatgacgcgccaatggtgggagttgttgagcttgtatctgaactatgtccttaaccaaatgatgttttgctgagcttagaagccgcatccgcctcccgctcttgctgaaatctgggaatcctattccccacttcactaaccggctgggtttgttcaataagaagcaattttgtacaggcttgacatcaagcaagccaagcagccttttgaaccaatatctccttaagccaatccaaacttgtatgaagtccagaacacatttgtgaaatggaatttcaaatttggttttggtcctcagaaatttctccctatcacttttgacttttcgacccaccatgatcttgtttctcgttaattaagtaaatcttgtgggtaaatcaaatgtaaggtacgtaaggtgatgaactgaacccatcaacttcctgaccttactggacggtaacgagaaatctttatgccaataaaggcatacagtatcaactaggtgtggctatatattatagcgattcagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0648900, RefSeq:Os03g0648900