Os03g0649000

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0649000| Description = Conserved hypothetical protein| Version = NM_001057317.2 GI:297601400 GeneID:4333583| Length = 3958 bp| Definition ...")
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Gene Name

Os03g0649000

Description

Conserved hypothetical protein

Version

NM_001057317.2 GI:297601400 GeneID:4333583

Length

3958 bp

Definition

Oryza sativa Japonica Group Os03g0649000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25907889..25911846

Sequence Coding Region

25910103..25910273,25911018..25911461

Expression

GEO Profiles:Os03g0649000

Genome Context

<gbrowseImage1> name=NC_008396:25907889..25911846 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25907889..25911846 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcgaggatgatgcggtggccgcgcccgccggcggcgcgcaagttccgggtccggctggtggtgcggcgggcggaggggctccagcagccatgcgccgcggcggcggagcacgcggcttcggcggaggcagaggcgccgccgacgagggttgcggcggaggtgaggtggaaggggcccaaggcgtcgcccctcagctcgctgcgccgcaccgcggtgcggcgcaaccgcacgcgggaggcggaggcggaggcggccgcggtggttgcctgcgccaccgccgccgacgatgccgctgccgccgcgggcgccggagacgcggcgggcgtggtggtggctgcgtgggaggaggagttcgagagcacggtgacgctcgctgccgcgtcgcaccgggagcacgccgcgttccagccatgggagctcgccttctccgtgttcactgctgccaacagaggaccaaagatcaagccatcaattcttggaactgcttcccttaacctagcagattatgcatccgccgccgaagagaatattgagataattctcccattgtccgtgccaaatggttcagctgagtcagctccctcgctacatgtaagtttgtggtgctaa</cdnaseq>

Protein Sequence

<aaseq>MVARMMRWPRPPAARKFRVRLVVRRAEGLQQPCAAAAEHAASAE AEAPPTRVAAEVRWKGPKASPLSSLRRTAVRRNRTREAEAEAAAVVACATAADDAAAA AGAGDAAGVVVAAWEEEFESTVTLAAASHREHAAFQPWELAFSVFTAANRGPKIKPSI LGTASLNLADYASAAEENIEIILPLSVPNGSAESAPSLHVSLWC</aaseq>

Gene Sequence

<dnaseqindica>1574..1744#386..829#gtgtaccatcaccaccatctccacctcctcctcctcccccaaccaatttcctctaccctcctccgcttccgccgagtcaaaatccaagcttgtcccctcaaaatctcaccttgtgcctccaccaccccaattcgaagctgttcctgaccgattcttcggttcttggaggaggaaaaagggggtttcttggggttttggtttgggggtccgatttggggttcggaatcccggattgattctttcttgctcggcatttcgattggtttggtggttcttggcttgtttgagcgagcggaggtttgggattccacgggtttttttctccgagtaattttggtcaaagtttgggagacagagagagctactccagtttttagttagttcgatggtggcgaggatgatgcggtggccgcgcccgccggcggcgcgcaagttccgggtccggctggtggtgcggcgggcggaggggctccagcagccatgcgccgcggcggcggagcacgcggcttcggcggaggcagaggcgccgccgacgagggttgcggcggaggtgaggtggaaggggcccaaggcgtcgcccctcagctcgctgcgccgcaccgcggtgcggcgcaaccgcacgcgggaggcggaggcggaggcggccgcggtggttgcctgcgccaccgccgccgacgatgccgctgccgccgcgggcgccggagacgcggcgggcgtggtggtggctgcgtgggaggaggagttcgagagcacggtgacgctcgctgccgcgtcgcaccgggagcacgccgcgttccagccatgggagctcgccttctccgtgttcactgtgagcattttcttcttcttcctactagtagtagaccgtctatgttcttcacatgaatttagagacaagactataattattatttatgtggatttttttggcatcatagtttttttttctttttgtctttttcttgtctcactttctcagaatagatttgtttgttgaaattcttttttgttgttttctttttttccctctattattgtgctccaaaaattgcactgttacctatctatgttatcaattttacttaatttaatttgtctggtctatggatagggtattggctactttttttttttttttgcttctccttgctgatatgatttgtgtgttttagattcgtcttacatgggaaaaagatttcattttggttctgaagaatgaatggatatataatataatagtagttgatggctatgaatcgcgtaataatcaaaatattttgtataatggaaaattttacatttcttacctctgcactgagatattctcgttaataagaaccagttagaacttcttgataataaccttgtacctatatgagaatgcgaacaaggtgtgaacaaatgtggacaagatggttcttgtcaaggccatcggaaacgtgtcatttaatagtatgcatttttttttgttctacacatttttttcttgagcgatttctgctgatgagtttgttttcagttacttctgctagcgagtctgactgtgactttcatttgttctctctcgatttaggctgccaacagaggaccaaagatcaagccatcaattcttggaactgcttcccttaacctagcagattatgcatccgccgccgaagagaatattgagataattctcccattgtccgtgccaaatggttcagctgagtcagctccctcgctacatgtaagtttgtggtgctaacaagctttagttcacaattcgtgttcgaattccatctggtctgacaatcaaaaccttttctttcttgcagctcaccctgggtatggtggaattaagggcttttcaggaaacatctgatgcttcacaaaggtctgctatggccgctccattatccccatcctctggtgattctgctccagtaggaaaagatgaggtttcagttatcagagccgggctgagaaaggtgaaaatcctcactgatctggtgtcgacacgaaggtccaagaagacatcccaagatgatgaaagcagtgaagaaaaatgctatgttaacagtgatggtgctgaatatccatgtgacatcgagtctctggatgacgatttggatgacagggcacagcaagatgaagttggggattcaactgtcaggaagtccttcagttatggctcactgcagtctgtcaactatgtcggcggcctagtttatgctcatgcaaagattgatggggagcatgaggactggatctattatagtcaccgcaaatctgatgccggttaccatgtagagggaaagccatcatcaactgttgaggaaaccatgctgccaactgtaaaacggagtatccttccttggagaaagaggaagttgagtttgcgatcactgaaggcaaaaggcgaacctctgttgaagaaagcatatggagaagagggaggtgatgatattgactatgatcgacggctgctaacctcttctgatggatctgtttcagaggtaaattttacaattcatcatctgcatctttaaataatggcttgtttctaaatcatagaactagttttgagtgtctgtgatacatgttcttaactgtacatctttcaattgcagggatcaaggggtgaagatgggtccattaatggtatggtttcagaatttggtgatgacaacttcgttgttgggaattgggaattgaaagagatagttagccgtgatggccatctgaagctctcttcccatgttttctttgcatcaatagaccagagaagtgagcgggctgctggggagagtgcttgcacagcacttgtggctgttattgcggactggttccaatcaaaccaggatataatgcctatacaatcacaatttgacagtttaatccgtgaaggatcattagagtggagaaacctttgtgagaatctgatgtaccgagagcgttttcctgacaagcactttgatcttgaaactgtccttcaggccaagatccgccccctcacagtttcttctagcaagtcttttattggattcttccaacctgaaggtgccgatgacatgcacagatttgatttccttgatggagcaatgtcatttgatagcatctgggctgagattagcaaagcagctgagtactcatcaagtgataaccctaatctatatatagtgagctggaatgaccacttttttctgctcaaggttgagcgtgatgcgtattacataattgacacccttggagaaaggctctacgaagggtgcaaccaagcctacattttgaagtttgacaacgacaccatgattcataagctacctgagaaagcaccatctagtcctaactcaagtggaccgctgaaggattcttcaaggagctcctcggttgagcaggacagtgaagatggcactgaagagaacatactggtttcaaagggcaaggaatcatgcaaggagtatatcaagagtttcttggcagccatcccaatccgggaactacaggttgacatcaagaaaggcctgatggcgtcgacgccattgcaccaccggcttcaaatagagttccactacactgcatcatccccaaaggagattacctcagcccctcaaattctaaccatcgaagccccttttgagttctcatggcctgagccaccaccggcaatggagatcgcgctagcaccagctgttgctgttgtatagcttcctgatggtgatctgtcctgacatcagtccactgcatgcatacttgctggagattttgtgtcctttatgtttgcgctcgtatcctgcctaatatgaactaactactataggtttttgtccaggcctaggagctttctgcctgcattttgtataaataggtgtttgctcctacatatttttctcaagtgccggatttgtaaccatcaagaaccttgtgttactaatcaatgagtaatgcacatgtgttagctatgttttggacctgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0649000, RefSeq:Os03g0649000