Os03g0650400

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0650400| Description = Conserved hypothetical protein| Version = NM_001057320.1 GI:115454368 GeneID:4333586| Length = 6075 bp| Definition ...")
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Gene Name

Os03g0650400

Description

Conserved hypothetical protein

Version

NM_001057320.1 GI:115454368 GeneID:4333586

Length

6075 bp

Definition

Oryza sativa Japonica Group Os03g0650400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:25994385..26000459

Sequence Coding Region

25994787..25994846,25996223..25996382,25996507..25996583,25996715..25997814,25997928..25998012
,25998459..25998521,25998690..25998752,25998951..25999034,25999121..25999711
,25999926..26000054

Expression

GEO Profiles:Os03g0650400

Genome Context

<gbrowseImage1> name=NC_008396:25994385..26000459 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:25994385..26000459 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcggagatggcggctcctgcgcttgcggcagctcatctgctggactcgcccatgaggccacaggtgagcagatactactccaagaagaggggtagcagccacagcagaaatggcaaggatgatgccaaccatgacgagtccaagaaccaatcacccggcttgcccctgagcagacagagcctgtcctcatctgccacccacacctaccacaccggagggttctacgagatcgaccacgagaagcttccccccaaatccccaattcatctcaagtccatacgcgtggtaaaggtgagcggctacacaagcctggacgtcacagtgagcttcccgtccctcctggcgctgcgaagcttcttctcctcctccccacggtcgtgcactgggccggagctcgacgagcgcttcgtcatgagcagcaaccacgcggcccgcatcctgcgccgtcgggtggccgaggaggagctcgcgggcgacgtgatgcaccaggacagcttctggctcgtcaagccctgcctctatgacttctccgcgtcgtcaccacatgatgtgctgaccccgtcgccgccgcctgccacagcgcaggcgaaggcgccggcagccagttcctgccttctcgacaccttgaagtgcgacggcgccgggtggggcgtgaggcgccgtgtcaggtacattggtcgccaccacgatgcttccaaggaggccagcgctgccagcctcgatggctacaacacagaggtcagcgtccaggaggagcagcagcagcgactgcggcttcgactgcggttgcgacaacgccgggagcaggaagacaacaagagcactagcaatggcaagaggaagcgggaggaggcagagagcagcatggacaagagcagagccgccaggaagaagaaagccaagacttacaagagtcccaagaaggtggagaagaggcgcgtcgtggaggctaaagacggcgaccctcggcgcggcaaggaccggtggtcggccgagcggtacgcagcggcggagaggagcctgctggatataatgcgctcccatggtgcctgcttcggtgcgccggtgatgcggcaggctctgcgggaggaagcccgcaagcatatcggtgacaccggcctccttgaccacctgctcaagcacatggccggcagggtaccggaaggcagcgcggaccggttccgtcgccggcacaatgcggatggtgccatggagtactggctggagccggcggagcttgccgaggtacggcggctggctggagtgtctgatccatactgggtgccgccacctgggtggaagccaggtgatgacgtgtccgcagtcgccggtgacctcctggtcaagaagaaggtggaagagctcgctgaggaggttgatggtgtaaaaaggcacatcgagcagctcagttctaatttggtgcagctggagaaggaaacaaaatctgaggcagagcgatcttacagctctaggaaggagaagtatcagaagttgatgaaggcaaatgaaaagctcgagaaacaggtgttatctatgaaggacatgtatgagcatctggttcagaaaaagggtaagctgaagaaggaggtgctgtccttgaaggataaatacaagcttgtgctggagaagaatgataaactggaggaacagatggctagtctctccagctccttcctttctttgaaggaacaattgctgctgccaagaaatggagataatctgaacatggaaagggaaagggtggaagtgactttgggcaagcaagaaggccttgttcccggcgaaccactgtatgttgatggtggtgaccggatcagccagcaagcagatgccaccgtcgtccaagtcggcgagaagaggacggcgaggaagagcagcttccgcatctgcaagccacagggaacgttcatgtggccacacatggcgtctggcacgagcatggccatcagtgggggaggcagcagcagctgccctgtcgcctccgggccagagcagctccctcgcagcagcagctgccccagcattgggcctggtggcctcccgccgtcgtcacgagccccagccgaggtggtggtcgcgtcgccactggacgagcacgtggcgttccgcgggggcttcaacacgccgccctcggcatcgtccaccaacgccgccgctgccgccaagctgcctcccctgcccagcccgacgtcacctctccagacacgggccctgttcgccgctggcttcactgtcccggcattacacaacttctccggcctcaccttacgccatgtggactcctcgtcgccgtcgtccgcgccatgcggtgctagggagaagatggtgaccctgttcgatggagactgccgggggatcagcgtcgtgggcaccgagctggcactggccactccgtcctactgctga</cdnaseq>

Protein Sequence

<aaseq>MDAEMAAPALAAAHLLDSPMRPQVSRYYSKKRGSSHSRNGKDDA NHDESKNQSPGLPLSRQSLSSSATHTYHTGGFYEIDHEKLPPKSPIHLKSIRVVKVSG YTSLDVTVSFPSLLALRSFFSSSPRSCTGPELDERFVMSSNHAARILRRRVAEEELAG DVMHQDSFWLVKPCLYDFSASSPHDVLTPSPPPATAQAKAPAASSCLLDTLKCDGAGW GVRRRVRYIGRHHDASKEASAASLDGYNTEVSVQEEQQQRLRLRLRLRQRREQEDNKS TSNGKRKREEAESSMDKSRAARKKKAKTYKSPKKVEKRRVVEAKDGDPRRGKDRWSAE RYAAAERSLLDIMRSHGACFGAPVMRQALREEARKHIGDTGLLDHLLKHMAGRVPEGS ADRFRRRHNADGAMEYWLEPAELAEVRRLAGVSDPYWVPPPGWKPGDDVSAVAGDLLV KKKVEELAEEVDGVKRHIEQLSSNLVQLEKETKSEAERSYSSRKEKYQKLMKANEKLE KQVLSMKDMYEHLVQKKGKLKKEVLSLKDKYKLVLEKNDKLEEQMASLSSSFLSLKEQ LLLPRNGDNLNMERERVEVTLGKQEGLVPGEPLYVDGGDRISQQADATVVQVGEKRTA RKSSFRICKPQGTFMWPHMASGTSMAISGGGSSSCPVASGPEQLPRSSSCPSIGPGGL PPSSRAPAEVVVASPLDEHVAFRGGFNTPPSASSTNAAAAAKLPPLPSPTSPLQTRAL FAAGFTVPALHNFSGLTLRHVDSSSPSSAPCGAREKMVTLFDGDCRGISVVGTELALA TPSYC</aaseq>

Gene Sequence

<dnaseqindica>403..462#1839..1998#2123..2199#2331..3430#3544..3628#4075..4137#4306..4368#4567..4650#4737..5327#5542..5670#gtcgtctcctccgctccttgcgccatctcgcggccgaacaggggagaggaggggaggggatcctggtgaggtgagcatccgcatcctctttctcatccatctctctctccccacttctctctggaatttgctcgcgtttctcttctagatctggaagaagctcttctctcttcatttcacagccttaaccttactcctcccaagtagtagtagcagtttgcttgcttgtttgttcccccaaaaagtttgatccgcccctggctcctgtgaatttattcgatcgcttcaatgtgtgcggatgtgcccgtgctgtggctgtgagatcgatggatcaatctctggattaattttgcttttgctttttttgttcttttggggacgaaggtctctgacgcggagcacatggacgcggagatggcggctcctgcgcttgcggcagctcatctgctggactcgcccatggtacagacgcgcatcttcgctgacacttctttccttgcgccttttttttttcaatttccatctcctcgcctggttagtttcatttcattgatcgcatatgctcagtgtgtacgagttgcttttgctgattaaaattcgatcggtgggggtgagtgtttggggggtttagatggtttgctatttggatgcagttgcatggttgtgtggatttctctaccaatgaatgtcttagtagtaattggatcagtacacttaatgcagctgatggattgaatcaatttgggtggtttgttgtgtaattactagcgattgcgatgcatgtgtggcgaaattagtgggctcaatccatagcttagtagtagaatccaagacttggaatttcatgcaaagatccctattaggcttgttaatcaatctctacatgttgatgttacgttctttggaaccgcacttgtggcgtactatttccagtcaatttattttgcctgctgcctgttgcgagtacaaccagaaattgctgattttagtggacatgtcatagatggaactatatgtgtcttgcatgtttctaatgttactcatgcacgataagtggttttgttaagtgaaagatgcagttggggtaatattagttcaagttgttaataagttgacaatgcagtgatgcacgctcttttcgtttggtacgatgtccggttaatatggtatatcttgaagattaatttgcatgttctaattaaccaaagggcttaaaatttgacatgtttcagttgtccaactaaactggagatagatacacgcgtcattgagttttcttttactgattaggcgattactttctgaaaaccatatgttttgaccaacttgctgtcatagttttttttttttaacctcatggagtgatagaattagcaataatgaactttagttcctatatatgtttaaggttccatatacttgcatgcatgtgcaatttactgacactagtgctgttaagttcagttaacatcagcagctaattagtctgggcagtgtcacagaaaaaaaaatcttaaagcaatactagatcacagactcacagctagtaattcggttcacacatatggatcactttgtcaggaaatcatgcatgcacagaaaaattgctcccctgtgtttattttgcttctaggtacagtacagagtggtacgtgatgttaattggtgtctctcttccacaaggctagaggtttaattccatctcacgcacgctgcacgcgcaccctctatcccaagctttcccgtttcagtatctctgatcgctcactgcacctgcattacacgagccaaaacgcctgacctgtgctttgcatgtgttgtgttggcccatttccaagaggccacaggtgagcagatactactccaagaagaggggtagcagccacagcagaaatggcaaggatgatgccaaccatgacgagtccaagaaccaatcacccggcttgcccctgagcagacagagcctgtcctcatctgccacccacacctaccacaccggtgagcagagcaatgcctccaggctttgaactctatcgtctagtttatatttgtgcaagagcagttcccccaactctgtttgtgccaagttcttgaaaacctgtgctgtttttggtttgatcaggagggttctacgagatcgaccacgagaagcttccccccaaatccccaattcatctcaagtccatacgcgtggtaaaggtgagcctttttttttcttactcgtacactcgactgctagctttgatctggattgatttgatgaattgttctcgaaatgtttgatctggattgcttctcgctcgtggtgttgtggtctttggtgggtgcaggtgagcggctacacaagcctggacgtcacagtgagcttcccgtccctcctggcgctgcgaagcttcttctcctcctccccacggtcgtgcactgggccggagctcgacgagcgcttcgtcatgagcagcaaccacgcggcccgcatcctgcgccgtcgggtggccgaggaggagctcgcgggcgacgtgatgcaccaggacagcttctggctcgtcaagccctgcctctatgacttctccgcgtcgtcaccacatgatgtgctgaccccgtcgccgccgcctgccacagcgcaggcgaaggcgccggcagccagttcctgccttctcgacaccttgaagtgcgacggcgccgggtggggcgtgaggcgccgtgtcaggtacattggtcgccaccacgatgcttccaaggaggccagcgctgccagcctcgatggctacaacacagaggtcagcgtccaggaggagcagcagcagcgactgcggcttcgactgcggttgcgacaacgccgggagcaggaagacaacaagagcactagcaatggcaagaggaagcgggaggaggcagagagcagcatggacaagagcagagccgccaggaagaagaaagccaagacttacaagagtcccaagaaggtggagaagaggcgcgtcgtggaggctaaagacggcgaccctcggcgcggcaaggaccggtggtcggccgagcggtacgcagcggcggagaggagcctgctggatataatgcgctcccatggtgcctgcttcggtgcgccggtgatgcggcaggctctgcgggaggaagcccgcaagcatatcggtgacaccggcctccttgaccacctgctcaagcacatggccggcagggtaccggaaggcagcgcggaccggttccgtcgccggcacaatgcggatggtgccatggagtactggctggagccggcggagcttgccgaggtacggcggctggctggagtgtctgatccatactgggtgccgccacctgggtggaagccaggtgatgacgtgtccgcagtcgccggtgacctcctggtcaagaagaaggtggaagagctcgctgaggaggttgatggtgtaaaaaggtctcctttctctcgcttttttgcagcttctacttcttgtttggagaaataccaacatttttgtcagttctacgagttctgtgctaaatttcacttgggctggtggtgtgaaggcacatcgagcagctcagttctaatttggtgcagctggagaaggaaacaaaatctgaggcagagcgatcttacagctctaggaaggtatatagcccatcaatcctgtcgattatttcccttgcatccattttccttctgtttattgttgttacttctcaagaaagcgggaatgtttttttgtttgcccattgtgacttaaaatgtaacaagctaatataacacttgagttgcattgacctgcttgcctgtattttgagttgcattgacctgcctgcctatattttgaaatctagtccttttatttgttttttcagaatttccatgtaggtattatcagtagttatggcaattggcaatctggtctttttcaatctctgaaagtgtaaattgtgaaggacatatatgcagccagctaaaatttctcagctttacttacattgacaaaagcatacacttttggcatgcctctcttctgttctgctctgctttccattattggagcactcatttctttagcatttgtttttcaggagaagtatcagaagttgatgaaggcaaatgaaaagctcgagaaacaggtgttatctatgaaggtaactaaacaacacctctcatcctactcctgcgctttcatctcaaactatgcaaaagcactggtaccttgtttagcaacaaatgatccacgtctctgatcatgttcgattatatgcctgcacttacattaaggtaaaacacatatcatttccttgtttaaattacaggacatgtatgagcatctggttcagaaaaagggtaagctgaagaaggaggtgctgtccttgaaggtatacccctgcagatacacctgaaatttccaccatgatctgcacttcaccacacattatgattttcaagcaaactaagcagttatactccttgggactattttactttggtccaccatgtttctgattattctgttgtacctagctatttgcatgtttaattatacaactcttgatcatcaactggtaccttttcaggataaatacaagcttgtgctggagaagaatgataaactggaggaacagatggctagtctctccagctccttcctttctttgaaggttggttgccctttgtgggttctgcttctaattgtacctgaaacacatgccttattccaaatcacctgacacctctgcatgcacaggaacaattgctgctgccaagaaatggagataatctgaacatggaaagggaaagggtggaagtgactttgggcaagcaagaaggccttgttcccggcgaaccactgtatgttgatggtggtgaccggatcagccagcaagcagatgccaccgtcgtccaagtcggcgagaagaggacggcgaggaagagcagcttccgcatctgcaagccacagggaacgttcatgtggccacacatggcgtctggcacgagcatggccatcagtgggggaggcagcagcagctgccctgtcgcctccgggccagagcagctccctcgcagcagcagctgccccagcattgggcctggtggcctcccgccgtcgtcacgagccccagccgaggtggtggtcgcgtcgccactggacgagcacgtggcgttccgcgggggcttcaacacgccgccctcggcatcgtccaccaacgccgccgctgccgccaagctgcctcccctgcccagcccgacgtcacctctccagacacgggccctgttcgccgctggcttcactgtcccggcattacacaacttctccggcctcaccttacgccatgtggtaagttcaaacatctgcatccgcactttgatttcaactcccaactcctcccaagaactggaattccttgagcctgtcagatgcaagatggacggcttggatgaccaaccagtcacccacagagaacacttctcttcccttctctttcttcaacatgtgacacctgacactgataatctcgtattcatggctggctgttcgtctgtctgtgcaggactcctcgtcgccgtcgtccgcgccatgcggtgctagggagaagatggtgaccctgttcgatggagactgccgggggatcagcgtcgtgggcaccgagctggcactggccactccgtcctactgctgatcaagttcttccctccccttctgcttcgccacccgcccccataattaattaattaatcacggaaccaaaagatttattctagtttaaggtagagaaatgataacataagaagacaataacaacacacacacacacacacaaaaatataagatagaagaggaagagttatttttctcggttacaaactcaaagttgcagtttagaacttggtaagtagatgtttcaggctggttggtcagttaatggtttgagtccccatgtctgtactgatcgatgtaagcctgacaaattttggtaggctgatactctccctagcccttcgcgtgacacattcgaagtggaatgtgtccagttttctgacgggctaggtccgctattttgtcctggatacatattcattattca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0650400, RefSeq:Os03g0650400