Os03g0650700

From RiceWiki
Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0650700| Description = Protein synthesis factor, GTP-binding domain containing protein| Version = NM_001057321.1 GI:115454370 GeneID:4333588...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0650700

Description

Protein synthesis factor, GTP-binding domain containing protein

Version

NM_001057321.1 GI:115454370 GeneID:4333588

Length

3313 bp

Definition

Oryza sativa Japonica Group Os03g0650700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26011271..26014583

Sequence Coding Region

26011409..26014498

Expression

GEO Profiles:Os03g0650700

Genome Context

<gbrowseImage1> name=NC_008396:26011271..26014583 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26011271..26014583 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacggcaagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgaggctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcaccatgaagtccgccgccgtcgtgctccaccacgggggccaccgcgtcaacctcatcgactccccgggccacatcgacttctgctccgaggtctcctccgccgcgaggctctccgactcggcgctcatcctcgtcgacgccgtcgagggcgtccacatccagactcacgccgccctccgccaggccttcctcgagcgcctccgcccctgcctcgtcctcaacaagctcgaccgcctcatctccgagctccacctcacccccgccgaggcctacacccgcctccaccgcatcatctccgacgtcaactccatccactccgccctgcgatcccactcctacttctccctcctctcctccctcgaggaccaaccttcctccgcctcctcttcctcgccggacgagctccccgaggacgttgacgaagacgaggaggacgctttccagccgcaaaagggaaatgttgtctttgcctgtgcccttgatggctggggcttccgcattcaccagtttgctgagttctatgccgccaagctccccaacatcaacgccaatgccttgctgaaagggctttggggtccacgatacttccacaagaagaagaagatgattgtggggaagaaagggatggagggcggcgacgcgcagccgatgtttgtggagtttgtcctcaagcccctttggcaggcgtatcagggagtgctgagcgagaacggtgagttggtgaagaaggtcattacaaacttcagtttgcaagttcagcaaagagagctgcagaacaaggacccgaaggtggttctgcaggctgtgatgagccgctggctgccgctcgctgatgcggtgatgacgatggtggtggaatgcacgcctgaccctgttgcagctcaaggggtcagggttgcaaggctcatgccaaagagggaggttgctccagaggatgctgctggttcccctgatattgttgtggatgcagagagggtcaggagctgtgtggaggcctgcgatgcgagagcagatgcaccagtggtggtgtatgtgtcgaagatgtttgccgtgccatataaaacgttgccattcaggggtgtggatggggagctgttgaaccaccaaggggccaatgagtctgaggagtgttttatggcatttgcaagggtcttttgtggggtccttcgtgcagggcagaaggtatttgtgttgtcaccactgtatgatccaatgaaaggggaggcgatgcagaagcatgtacaggaagtggagctgcaatacttgtatgagatgcttgggcagggcctgaggccagtttctagtgtgtgtgctgggaatgtggttgcaatccagggacttggtcatcatatattgaagagcgccacattgtcatccaccaaaaattgctggcctttctcaagtatgatgttccaggtgtctccgatgcttaaggttgcaattgagccctccaacccagcagatttaggagcccttgttaaagggcttaaacttcttaaccgggcagatccatttgttgagtacactgtctcacagagaggtgagcatgttcttgctgcagctggggagatacatttggagaggtgtaaaaaggatttggaggaaagatttgcaaaggtcaaattggtggtctcagaccccctggtgtcctttaaagagacaattgaaggcgaaggccttgccttgatagagagcctgaaggctccacgggaattcgttgagagaactactccaaatgggagatgcactgtgagagttcaggttttgagacttcccaatgcgctcattaaggttcttgaagaaagtgaacaattgcttggtcaaataattgaggggaaaacagcaaagaggaacggcgtgttggatccacatctttctcaggatgatggtgattctgctgcaacacttaggcaacgcctgatcaatgctatagacagtgagttggaagcattttctgagcaagtggataaagaaaaacttgagaggtatagaaatacatggcttggatacctccaaagaatctggtcactcggtccttggcaggttggtccaaacctccttctcttgcctgatgtgaaatcaagtgacagtgtgataaccagtcaagatggaaggcaaggcattcttgtgcgtggtagatctcatgtctctgagagattaggatttgtgtgtggatctgatgctgaagctaacaatgatcttgatgacagtgaaccatcagcagatactcctgaatcattacatctagaatctgtggctctgaggaactgcatagtatcaggttttcaattagcaacaaatgcagggccactatgtgatgagcccatgtggggtctagtatttgttgttgaaccttacatattctgtgaccactctgatgctgcaaatcactctgaacagtacaacatcttcagtggtcaagtaattaccgctgttaaggaagcatgtcgagaagctgttgttcagaacaaaccaaggctagttgaagctatgtacttctgtgaattgaccacaccaaccgaacaactgggtgcgacatatgcagttcttagtaggaagcgagcaagggttctgaaggaggagatgcaagagggaacttctttatttactgtgcacgcatacttaccagttgctgagagcgttggattttctaatgagcttaggagtgtaacagctggtgcagccagtgctctgcttgttcttagccactgggaagctattcctgaggaccctttctttatcccaaaaacgcatgaggagattgaagaatttggagatggttccagcattgggccaaacttagctaagaagcttatgaattctgtcaggcgaaggaaggggcttcatgttgaagaaaaagtggttgaacatggcacaaagcagaggacgctggcgaagaaggtgtag</cdnaseq>

Protein Sequence

<aaseq>MAAPADPRRVRNTCILAHVDHGKTTLADHLVASCGDGLVHPRLA GRLRFMDYLDEEQRRAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSA LILVDAVEGVHIQTHAALRQAFLERLRPCLVLNKLDRLISELHLTPAEAYTRLHRIIS DVNSIHSALRSHSYFSLLSSLEDQPSSASSSSPDELPEDVDEDEEDAFQPQKGNVVFA CALDGWGFRIHQFAEFYAAKLPNINANALLKGLWGPRYFHKKKKMIVGKKGMEGGDAQ PMFVEFVLKPLWQAYQGVLSENGELVKKVITNFSLQVQQRELQNKDPKVVLQAVMSRW LPLADAVMTMVVECTPDPVAAQGVRVARLMPKREVAPEDAAGSPDIVVDAERVRSCVE ACDARADAPVVVYVSKMFAVPYKTLPFRGVDGELLNHQGANESEECFMAFARVFCGVL RAGQKVFVLSPLYDPMKGEAMQKHVQEVELQYLYEMLGQGLRPVSSVCAGNVVAIQGL GHHILKSATLSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALVKGLKLLNRADPF VEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGEGLALI ESLKAPREFVERTTPNGRCTVRVQVLRLPNALIKVLEESEQLLGQIIEGKTAKRNGVL DPHLSQDDGDSAATLRQRLINAIDSELEAFSEQVDKEKLERYRNTWLGYLQRIWSLGP WQVGPNLLLLPDVKSSDSVITSQDGRQGILVRGRSHVSERLGFVCGSDAEANNDLDDS EPSADTPESLHLESVALRNCIVSGFQLATNAGPLCDEPMWGLVFVVEPYIFCDHSDAA NHSEQYNIFSGQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRK RARVLKEEMQEGTSLFTVHAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP FFIPKTHEEIEEFGDGSSIGPNLAKKLMNSVRRRKGLHVEEKVVEHGTKQRTLAKKV</aaseq>

Gene Sequence

<dnaseqindica>139..3228#acgttcagccccaatccccaaaggcccgaggagctgaaaattccggaaccttcgtctcgccgccggcgccgcccatcccaaattttcccccacccgaaagcccaaaccctaataccgccgccgccgacggccaccgcaatggcggcgccggcggacccgcggcgggtacgcaacacgtgcatcctggcgcacgtcgaccacggcaagacgacgctggccgaccacctcgtcgcctcctgcggggacggcctcgtccacccgaggctcgcggggcgcctccgcttcatggactacctcgacgaggagcagcgccgcgccatcaccatgaagtccgccgccgtcgtgctccaccacgggggccaccgcgtcaacctcatcgactccccgggccacatcgacttctgctccgaggtctcctccgccgcgaggctctccgactcggcgctcatcctcgtcgacgccgtcgagggcgtccacatccagactcacgccgccctccgccaggccttcctcgagcgcctccgcccctgcctcgtcctcaacaagctcgaccgcctcatctccgagctccacctcacccccgccgaggcctacacccgcctccaccgcatcatctccgacgtcaactccatccactccgccctgcgatcccactcctacttctccctcctctcctccctcgaggaccaaccttcctccgcctcctcttcctcgccggacgagctccccgaggacgttgacgaagacgaggaggacgctttccagccgcaaaagggaaatgttgtctttgcctgtgcccttgatggctggggcttccgcattcaccagtttgctgagttctatgccgccaagctccccaacatcaacgccaatgccttgctgaaagggctttggggtccacgatacttccacaagaagaagaagatgattgtggggaagaaagggatggagggcggcgacgcgcagccgatgtttgtggagtttgtcctcaagcccctttggcaggcgtatcagggagtgctgagcgagaacggtgagttggtgaagaaggtcattacaaacttcagtttgcaagttcagcaaagagagctgcagaacaaggacccgaaggtggttctgcaggctgtgatgagccgctggctgccgctcgctgatgcggtgatgacgatggtggtggaatgcacgcctgaccctgttgcagctcaaggggtcagggttgcaaggctcatgccaaagagggaggttgctccagaggatgctgctggttcccctgatattgttgtggatgcagagagggtcaggagctgtgtggaggcctgcgatgcgagagcagatgcaccagtggtggtgtatgtgtcgaagatgtttgccgtgccatataaaacgttgccattcaggggtgtggatggggagctgttgaaccaccaaggggccaatgagtctgaggagtgttttatggcatttgcaagggtcttttgtggggtccttcgtgcagggcagaaggtatttgtgttgtcaccactgtatgatccaatgaaaggggaggcgatgcagaagcatgtacaggaagtggagctgcaatacttgtatgagatgcttgggcagggcctgaggccagtttctagtgtgtgtgctgggaatgtggttgcaatccagggacttggtcatcatatattgaagagcgccacattgtcatccaccaaaaattgctggcctttctcaagtatgatgttccaggtgtctccgatgcttaaggttgcaattgagccctccaacccagcagatttaggagcccttgttaaagggcttaaacttcttaaccgggcagatccatttgttgagtacactgtctcacagagaggtgagcatgttcttgctgcagctggggagatacatttggagaggtgtaaaaaggatttggaggaaagatttgcaaaggtcaaattggtggtctcagaccccctggtgtcctttaaagagacaattgaaggcgaaggccttgccttgatagagagcctgaaggctccacgggaattcgttgagagaactactccaaatgggagatgcactgtgagagttcaggttttgagacttcccaatgcgctcattaaggttcttgaagaaagtgaacaattgcttggtcaaataattgaggggaaaacagcaaagaggaacggcgtgttggatccacatctttctcaggatgatggtgattctgctgcaacacttaggcaacgcctgatcaatgctatagacagtgagttggaagcattttctgagcaagtggataaagaaaaacttgagaggtatagaaatacatggcttggatacctccaaagaatctggtcactcggtccttggcaggttggtccaaacctccttctcttgcctgatgtgaaatcaagtgacagtgtgataaccagtcaagatggaaggcaaggcattcttgtgcgtggtagatctcatgtctctgagagattaggatttgtgtgtggatctgatgctgaagctaacaatgatcttgatgacagtgaaccatcagcagatactcctgaatcattacatctagaatctgtggctctgaggaactgcatagtatcaggttttcaattagcaacaaatgcagggccactatgtgatgagcccatgtggggtctagtatttgttgttgaaccttacatattctgtgaccactctgatgctgcaaatcactctgaacagtacaacatcttcagtggtcaagtaattaccgctgttaaggaagcatgtcgagaagctgttgttcagaacaaaccaaggctagttgaagctatgtacttctgtgaattgaccacaccaaccgaacaactgggtgcgacatatgcagttcttagtaggaagcgagcaagggttctgaaggaggagatgcaagagggaacttctttatttactgtgcacgcatacttaccagttgctgagagcgttggattttctaatgagcttaggagtgtaacagctggtgcagccagtgctctgcttgttcttagccactgggaagctattcctgaggaccctttctttatcccaaaaacgcatgaggagattgaagaatttggagatggttccagcattgggccaaacttagctaagaagcttatgaattctgtcaggcgaaggaaggggcttcatgttgaagaaaaagtggttgaacatggcacaaagcagaggacgctggcgaagaaggtgtagttattttgtatgtttcaaattttgtcctgatagacccaaatactataatcaaatacagaattcgatgtgaccacatggttttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0650700, RefSeq:Os03g0650700