Os03g0650900

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Revision as of 12:50, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0650900| Description = SPX, N-terminal domain containing protein| Version = NM_001057323.1 GI:115454374 GeneID:4333590| Length = 4694 bp| ...")
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Gene Name

Os03g0650900

Description

SPX, N-terminal domain containing protein

Version

NM_001057323.1 GI:115454374 GeneID:4333590

Length

4694 bp

Definition

Oryza sativa Japonica Group Os03g0650900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26028503..26033196

Sequence Coding Region

26028909..26029014,26029110..26029168,26029439..26029576,26030110..26030373,26030453..26030697
,26031265..26031472

Expression

GEO Profiles:Os03g0650900

Genome Context

<gbrowseImage1> name=NC_008396:26028503..26033196 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26028503..26033196 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagttcggtgcaatatatgaagagtatcttcgggaacagcaagacaaatacctaacaaagtgctcacatgtggagtacaaacgtctcaaaaaggtactgaagaaatgtcgagttggtcgctcattgcaagaagactgccccaatggtgaccagcaggaggggaacaacgaatctccagatatttgcaaatgcaattcatgcacattgtgtgatcaaatgttctttacagaacttactaaggaggcttcagaaatagctggctgtttcagctctagagtacaacgtctcctaaatcttcatgtcccttcaggatttctacgctatatttggcgtgtaaggcaatgtttcatagatgatcaacaaatcatggttcaagaaggcagaatgttacttaattatgtaaccatgaatgctatcgctatccgtaaaattctgaagaagtatgacaaaatacatggttctgtcagtggtagagatttcaagagcaagatgcaaactgatcatattgaactgttgcagtccccttggctgatagaactgggtgctttccatctaaactgcaatagttcagatattgatgaaactgtggggttccttaagaatgagttcttcaagaatttttcctgtgatttgaccgaagcacgaccactaatgactatggctatttctgaaactatgaagtatgagtacagcctaacttgtccaatttgcttggatactttgttcaacccatatgcacttagctgtggccatctcttttgcaaaggctgtgcttgtggagctgcttctgtgtacatctttcaaggtgttaagtctgcacctcctgaggcgaagtgtcctgtatgccgatcggatggtgtctttgctcatgctgtgcatatgactgaacttgacttgctcatcaaaacaaggagcaaggattactggagacagagactgcgagaagagcggaatgagatggttaagcaatccaaagaatactgggactctcaggctatgctgtcaatgggaatttga</cdnaseq>

Protein Sequence

<aaseq>MKFGAIYEEYLREQQDKYLTKCSHVEYKRLKKVLKKCRVGRSLQ EDCPNGDQQEGNNESPDICKCNSCTLCDQMFFTELTKEASEIAGCFSSRVQRLLNLHV PSGFLRYIWRVRQCFIDDQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRD FKSKMQTDHIELLQSPWLIELGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPL MTMAISETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGCACGAASVYIFQGVKSAPP EAKCPVCRSDGVFAHAVHMTELDLLIKTRSKDYWRQRLREERNEMVKQSKEYWDSQAM LSMGI</aaseq>

Gene Sequence

<dnaseqindica>4183..4288#4029..4087#3621..3758#2824..3087#2500..2744#1725..1932#tccgttgcgctcgtctcctcctctcgccgcgccgccgccccccgcccccacgatcgacgactcgccgcgccgccgccgccgccgccgccaacgcatgcaggtagtgatcctgatccctcgccgccggaaagcggcaacagtttctccttgttccgtccgcgtgtgcttcttcccgccgcgcgccgcgcgccatttgctctttcgatcggcgggcggttgttaattttgtgggttgatgggggtgtagatcatcaggacgaaatttgccttctccaactctgctgctagagcgcttcattcgggagagggcacaacgcggatcgaatgcgcacttccacatttatttccttttctctttgttattaccaaaaacatttttcttcttcttcattcttttattttttttggttcctggtagttcgattcatgccggaatagattccgttggtcactgtccaatgtccatgtcccctgttcctaattcctttgtgagccttttctttttcatctgacgtgtgagttgagttgtcagtcgtgtttacactaatccattgcatttgtccatgtaaagcagatgatttgcttttcctgggtgagttatgagtcacatgcaattgcttcttaacctgcacaacctctaaattaagccaaaaggcctagtcatgttatccagattacttgtactggccatctaaaaaaaggattactgttgttgtttgttcttcaagcgattgatactgacttcgtgtcatattaggacatccagatcagttaaatggatggttttctacgtcaggtattacaaagtcagctctcatcttattgtctaaccacataccttattgttttgaatgaagtcttaacacatattatgattctaacttgatccattagtgatatgtgctttttggaagattctaaatatgtggtctctgttttccttgaaaggaactactttcaacatacgtggtcatgtaataatggaatgtattcctagaagtcagtacaagtgtgcaatccgttcaaatcattgtctgctacttttctcagcgtgttgtcgtcttatcctattccaacgaggggcaactcctatctgtttttggtgggcttgtggccagctgggttgataaacattgccacatgttcaagtttttgttcagtgctgagcgcaagcaacaaaccaaaatggggggaacagtagtttcttgttttgttttctttaagttgaactaatattttttttaaaaaaaagacacagctaatggcttatgtatgatattagttttttttaggatcataagttttgcaccttttatggtccatatttaccatcttattaatttttaaccattgtaattgtgcgatatacctgctatgtcaagtaagcttttgttatgtactaaaactatctgtctgatttaatgcatgcaagcctaattttgttccttgctacaagttatgatattttttagggtggttcatcgctacaagctattcctgaagaaagtgtctttactttttaaaatttcttattgtgcaagtatagaactcactgggagttgtaatacctcacggcatgattactgtgttggaaaagagtacagctgaaacactctttctttttttttttatcaggggatgatattgtaggtaactatattttgatgtggtacaatgcaacttcacatggtctcagctagttttcagctttttctgtaggcaagatgaagttcggtgcaatatatgaagagtatcttcgggaacagcaagacaaatacctaacaaagtgctcacatgtggagtacaaacgtctcaaaaaggtactgaagaaatgtcgagttggtcgctcattgcaagaagactgccccaatggtgaccagcaggaggggaacaacgaatctccagatatttgcaaatgcaattcatgcacatgtatgttcaacttcctgctttcatctaatagcatgacagagtaccaattttctattttctttcttcgattactccaacctgtgttttttacatagaactcagagatttgtgaggaactaaatatatcttgttataatttactgggaattgtgtatagattacattcacgatgggttttaaaacagtgcagtttctgtttatgatgatttatcttactagtagtaatatggcctgcaatgcacccaaaattataccaactgattcttccctttggtaaaagtataaggactctaatttcatttcatacaatctaattctctgcctcaaagattacatataatagctcggaaggttaggtagctcaggttgtctatttgataaatagctgtgaagaattatatgtcctatcagattacatgattttgcaacaaaacttgtactacttatcttgaatatttggctaaatcatttctttcatgtgatgtgttggctatcacctttcttgtcttccacttaatctactatctgtgcttttcagatcctgacttccaatattttcttgttcagtgtgtgatcaaatgttctttacagaacttactaaggaggcttcagaaatagctggctgtttcagctctagagtacaacgtctcctaaatcttcatgtcccttcaggatttctacgctatatttggcgtgtaaggcaatgtttcatagatgatcaacaaatcatggttcaagaaggcagaatgttacttaattatgtaaccatgaatgctatcgctatccgtaaaattctgaagaagtatgacaaagtaagtgttcgtcttctagtaggcatcatacatgctcactgttaaaggtgattgtgctaataagtggatgattttgcagatacatggttctgtcagtggtagagatttcaagagcaagatgcaaactgatcatattgaactgttgcagtccccttggctgatagaactgggtgctttccatctaaactgcaatagttcagatattgatgaaactgtggggttccttaagaatgagttcttcaagaatttttcctgtgatttgaccgaagcacgaccactaatgactatggctatttctgaaactatgaagtatgagtacagcctaacttgtccaatttgcttggtgagaaactgttcttaaatttatgttttcttctaaatatctttaagtgttgtgccttcttactaagtaaaaagatgacgatagctaatttattggctttttgtaacaaacattataagcagtgacgttcagccttcaccagcaatacatagttcttgatgaatagtttttggctgctgcagtcgtcaagtgcacttggatgttgccatgacttctacagccagttgatacaaacaatcagttctgttgcacaaattttctgtagtatagcatggtattcgtatttaaattttttttaaaaaaaactgacacattatttagtaaagtttgaagtgggtaaggcaattatttagtaagttagctgcagctaccgaaaaggaggtaggttgacctggagaaaatgtgggtgaggaagtttgcggagaatgaaactcacccaaatattgcaatcccttgctgattgtatctgccggatggtgagtctttggtagaatgtacgaactactaaacttaagatttcgtcatgtgcccaggatactttgttcaacccatatgcacttagctgtggccatctcttttgcaaaggctgtgcttgtggagctgcttctgtgtacatctttcaaggtgttaagtctgcacctcctgaggcgaagtgtcctgtatgccgatcggtacgtatgcatcgtgtatatattttttctatatgttacaaagcttcatctgttgctgtgaattttataatatttatttttatcgtccaccctctcctattctttcatgccaacattgcaacagtatccgtagaaactctcagctttcaaccattgttttatgcttgaacttgctgctaagtaatgcaactaccatacagaccagaatatgatttatccattgcattacttcagacttccatgttaatggtttgtatttactgctctcaggatggtgtctttgctcatgctgtgcatatgactgaacttgacttgctcatcaaaacaaggtattggaagttaatttctcttatgcaagaaataaatataaaaagatactagtatctctttttcatgatctaatttgaatctgcatgttgatcaggagcaaggattactggagacagagactgcgagaagagcggaatgagatggttaagcaatccaaagaatactgggactctcaggctatgctgtcaatgggaatttgactgagatctgaagttacaatgatcgccattcattgcttgcattggtgtcaaaccaaaaataatcaggtcgaccataatctcaagcgtggagatcatccaagatgattttaacttattaactgccagtctcctaaaagttgcaatcagtgaggactaccttgggatagcacaggctaacacagctgaggttattttattttagctcttgaagaagcaattccattccattattttttgtcctaatgttgtcgcctgatatagtttaatttggaaatgcaaccatatttaattaattttctttggaccttcaaatgtagtttggaacaatttatacgcaatttatctgttctttgctttgtaaaaacgagtgtagaaatgtcttatttgaatgtctctggctcgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0650900, RefSeq:Os03g0650900