Os03g0654700

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Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0654700| Description = Protein of unknown function DUF1637 family protein| Version = NM_001057334.1 GI:115454396 GeneID:4333605| Length = 3...")
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Gene Name

Os03g0654700

Description

Protein of unknown function DUF1637 family protein

Version

NM_001057334.1 GI:115454396 GeneID:4333605

Length

3918 bp

Definition

Oryza sativa Japonica Group Os03g0654700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26287089..26291006

Sequence Coding Region

26287406..26287536,26287622..26287840,26287986..26288145,26288252..26288388,26290361..26290796

Expression

GEO Profiles:Os03g0654700

Genome Context

<gbrowseImage1> name=NC_008396:26287089..26291006 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26287089..26291006 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggatcagtgcctgtgcctcgtttcctgtggttgcggtggactccgcgttgagaccagaggcggtggaagggcagggcgcggcggcgacggcggtggcggcgcccaagacggtgaccgagtctgagtcgtcggcgtcggcgtcggcgtccatggagccggaggagcaggtggaggaaccagcgaagaagaggaagagggacccggcgccggacgtggggagctccagcatggacggtactgacggccaaggaagcgacgacgacaagaacgacgacggcgaggaagcgccggtgctgcaggcggtgtccccgccgcggcagaatgctctccagcggcttgtcgacgagtgccgcgtgctgctcgatggctcctccaagtccactcagccgcccaacagtactaccgtctcccgtatcgtcgccttgctcaatggaattggaccggatgacctcaagctgggcacggtgctcgacacctccgaggtaacgagagctgccgctttccgccgccgagaccccatacaggttatcgggggcaattacctgtacgaatgcgataatttcacggtggcggtcttctacctgcccgccgggacggtgatgccgctgcacgaccacccggggatgacggtgttcagcaagctcctcgccggctcggtgcacgtccagtccttcgactgggtcagcccctccgtctacggctccggcgggaagcgcgctgttcactctaagaatacgaagctggtgaagaaggtgctggaccacgtcgtggaggcggggtgcggcacctgggtgctgtacccgtccaccggcgggaacctgcaccggttcgtcgccggcgtggacgggccctgcgccttcctcgacgtcctcacgccgccctactcggagggccgcctccgccggtgcaccttctaccgtgattaccccttccaactccaccgcaatcacaggttcgcccgcaacttgagcgcccaggagaagagccagtttgcatggctgcgaccgatcaacgccagcgcgccgccggaccttcggatcgtccccttgacgtacagtggcccgccggtcgtctag</cdnaseq>

Protein Sequence

<aaseq>MAGISACASFPVVAVDSALRPEAVEGQGAAATAVAAPKTVTESE SSASASASMEPEEQVEEPAKKRKRDPAPDVGSSSMDGTDGQGSDDDKNDDGEEAPVLQ AVSPPRQNALQRLVDECRVLLDGSSKSTQPPNSTTVSRIVALLNGIGPDDLKLGTVLD TSEVTRAAAFRRRDPIQVIGGNYLYECDNFTVAVFYLPAGTVMPLHDHPGMTVFSKLL AGSVHVQSFDWVSPSVYGSGGKRAVHSKNTKLVKKVLDHVVEAGCGTWVLYPSTGGNL HRFVAGVDGPCAFLDVLTPPYSEGRLRRCTFYRDYPFQLHRNHRFARNLSAQEKSQFA WLRPINASAPPDLRIVPLTYSGPPVV</aaseq>

Gene Sequence

<dnaseqindica>3471..3601#3167..3385#2862..3021#2619..2755#211..646#acgctgctcctcgatcggctctctcgcgctccctgatcattcctggctggttcgtacgttgtgattgatcgagagatcggcgttgcacggtgagcatgcatgcagcttcgcgttcggtaatggctgggttttccccgttggttatttcccgtgagattcttactacttcttctcgtactatacgtcgttgcgtgttgtgtgttgatagcgatggcggggatcagtgcctgtgcctcgtttcctgtggttgcggtggactccgcgttgagaccagaggcggtggaagggcagggcgcggcggcgacggcggtggcggcgcccaagacggtgaccgagtctgagtcgtcggcgtcggcgtcggcgtccatggagccggaggagcaggtggaggaaccagcgaagaagaggaagagggacccggcgccggacgtggggagctccagcatggacggtactgacggccaaggaagcgacgacgacaagaacgacgacggcgaggaagcgccggtgctgcaggcggtgtccccgccgcggcagaatgctctccagcggcttgtcgacgagtgccgcgtgctgctcgatggctcctccaagtccactcagccgcccaacagtactaccgtctcccgtatcgtcgccttgctcagtacgtggctacgtgcacctatcctcatcagctttctcgatcgttgcatatatttcaaaatttaagttagattcatattcttgcatttttcaaattttcgacagcgatttacagatgtttttgagaaaacaagggatgttccctcgaggtgtgcgtgtgacacttttttttttgatacataggtgtgtgagaaacattaataacccacaaatcaccatgcatgtgcaagtgcaatatgcattgtccacaaacgacacacgcgcgcgcgcgcgcacacacacactttttagtggtaaacacacatgtatagattgacagggctattatttgtttgagggatatatatcaaattaaaacttaaaaaggctatttatgctcgagttaattattgactgccgttaattagttcgtgtagacacttcttagtaaaatgttatgtcgactgaaatatgtgtatggcatatgcatgtatgttgaagggggtgtttggctgagtagtgctccatttaaccaagatttttaaagtttttttttgttacattgccattagtatgccataccacagtttttggcaatggactctacttgtcattcatatttttcttgctctcgtcgtgcctaaggatttgagcacattgtcaacaaattcttgaccacaccttaactatgctctggtaagattgtgcgatttgtttgcacacacatattgactttaatatgcatacacccgtatatgtgtagtcggtatgtaattaatgtagtatacgtgtgctatcttttggatgccctaggagatagatatttttcgcatataaaaatatttgtattgtcgggtggacatgtgctttgagtatttatgtatgatatggattgtagttgtcatggttatatcttcactaccaaacacatcgaaccatgcgtattaaatacatacgtcattatgtaaaaaaatatttgaaaaaaaaatcgtgtgcaaatatttgaagaaatatgtcttaagaggggagtgttaaaagtatatgctgctataccaaacatatttgagatacatatgtcattatgtaaaaaatattattttaaaaaaattgtgtgcaaatattcgaaaaaatgtgtcttaaaaggggagtgttaaaagtatatactgccataccaaacgtatttgagatacatacgtcattatgtaaaaaagtattatttgaaaaaaattgtgtgcaaatattcgaagaaatgtgtcttaagagtggagtgttaaaattatataatgccaaaccaaacatatttgagatgttgattttcttctgatgtttattttcttgtatatttgtgaagtgattgcagattaatctatcttgttaaatttttttgatgattttttaaggtgatgtgtaaaaaaaatgaggggacattttatctataggaaaaaaaaaacctttcccccttcttctgcctttttcttttctttgtgatactgtagtccccatggccccacccttctccaagtaatgtgattctgtccgaaaccctgaacacaacaatacacctgataatcaaagtgacgaccttcatttttttttcggttttgctatagatatgtcgccataaatcttctctaattacagtcagtttgttagccctcaaagtttcgtttagattcgtgcaggactgcttaatttgccatcgtgcgtgcaagtacatacacatgcacctatgctgcttgctgtgatttatccgatcgatcacgttcctttgctatctacatgtaaaattacactctatttacatatgtaattttaatatttacatatgtaatttcaagatttacattataaatacactaaaattacatatgtaatttaggaagttacaatgtaaatacatgccgactattttttggtgaaaaatatgacgccataaatatagctacaccctttttttttctaaagaaaagtgacgacctgactttgagttccagatggaattggaccggatgacctcaagctgggcacggtgctcgacacctccgaggtaacgagagctgccgctttccgccgccgagaccccatacaggttatcgggggcaattacctgtacgaatgcgataatttcacggtgcgtacgtactactaattccgatccctgaacgtaattgcaatttgttaacgatgatatatatatatatatatatatatagttactgattaattctttgatgcaggtggcggtcttctacctgcccgccgggacggtgatgccgctgcacgaccacccggggatgacggtgttcagcaagctcctcgccggctcggtgcacgtccagtccttcgactgggtcagcccctccgtctacggctccggcgggaagcgcgctgttcactgtacgtaagccttacccccctccccccccccccttgtgcagttcagcgccgccgctcgccggcgtaagtacgtacgtcgcgccgccgatctgatcacactctgcgtgcttgcgtgcgtacgggcgtgttggatatgatgtggcagctaagaatacgaagctggtgaagaaggtgctggaccacgtcgtggaggcggggtgcggcacctgggtgctgtacccgtccaccggcgggaacctgcaccggttcgtcgccggcgtggacgggccctgcgccttcctcgacgtcctcacgccgccctactcggagggccgcctccgccggtgcaccttctaccgtgattaccccttccaactccaccgcagtaagcaagcacagctgcagaaatttgtgccatttcttggcttgatcgatcggcgttaattgttgatttgtgcgtatacatgcagatcacaggttcgcccgcaacttgagcgcccaggagaagagccagtttgcatggctgcgaccgatcaacgccagcgcgccgccggaccttcggatcgtccccttgacgtacagtggcccgccggtcgtctaggccggccggctcgccggcgggctggccggccgccgccggccgccgatcgaatgaacggtggccaccgcgcgcgcgctagctcgatcgtgtgtcgcttactgttgacgaacgaataaattggtgtgatatgatcgatggtttgcgacgatgattattagtattggagcgagtactcgatccgcttgttatcttagcagtactttgcgttgcagcaacttgctctcttcgtgtgcagcaataataaacaataatgaccatccccagatgttttaattactttgagtgtccttagtgtaatttgttggtgtgaatttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0654700, RefSeq:Os03g0654700