Os03g0656000

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Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0656000| Description = HSP20-like chaperone domain containing protein| Version = NM_001186641.1 GI:297722412 GeneID:9270178| Length = 1526 ...")
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Gene Name

Os03g0656000

Description

HSP20-like chaperone domain containing protein

Version

NM_001186641.1 GI:297722412 GeneID:9270178

Length

1526 bp

Definition

Oryza sativa Japonica Group Os03g0656000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26352936..26354461

Sequence Coding Region

26352936..26353146,26353600..26354137,26354332..26354461

Expression

GEO Profiles:Os03g0656000

Genome Context

<gbrowseImage1> name=NC_008396:26352936..26354461 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26352936..26354461 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggcagcgaccgctgccgcggcggcggctcccccgccgcctcgccgccacggttacgcgaacgtcgatccccggtgcgagtggacacgcacggaagacgccgacaccctcgtcgtcgatgtctcagggttcaggaaggaggagctgaaggtgctgtacaacaccagccggaagctgaaggtcgccggcgagcggcgggccgacggcggccaatgggcacgcttcctcaagatgtttccggtcccgaggagctgcgacgccggcgccatcagggccgtcatggacaacgaggaagccctgctctacgtcatcctgcccaagggatcatcgtcttcttcctcctcctccagggacaagaaggaagatgaacacaatgtgagctcccagcctcagggagaagcagccatggcgcccatggcggatgggccatcaagcagcagcggcggcggtggcaatctgtacatcgcccaggaagacgaagagatgggcaagattgatgagaaagaagaggtgattgccacgcaggatgtgccaagaacacacggcgatgtggatgatggtaacgggagatggtggcagagggtcaggcctatgaatgttcttggcgttgctctcatccttgcagtggcttgcgttggagcctatgtgctgtgcttgatgctgctgtttcacctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgtcaagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgggggagtggatgtcatacacaccctcgcggaagacggacaggagcttctcatcggttcgggagttctcgatggagctcctggataa</cdnaseq>

Protein Sequence

<aaseq>MQAATAAAAAAPPPPRRHGYANVDPRCEWTRTEDADTLVVDVSG FRKEELKVLYNTSRKLKVAGERRADGGQWARFLKMFPVPRSCDAGAIRAVMDNEEALL YVILPKGSSSSSSSSRDKKEDEHNVSSQPQGEAAMAPMADGPSSSSGGGGNLYIAQED EEMGKIDEKEEVIATQDVPRTHGDVDDGNGRWWQRVRPMNVLGVALILAVACVGAYVL CLMLLFHLGVFAGLETAVRVHLEDVGVKHGKHLVDAVRDLLGGGDPGGVDVIHTLAED GQELLIGSGVLDGAPG</aaseq>

Gene Sequence

<dnaseqindica>1316..1526#325..862#1..130#atgcaggcagcgaccgctgccgcggcggcggctcccccgccgcctcgccgccacggttacgcgaacgtcgatccccggtgcgagtggacacgcacggaagacgccgacaccctcgtcgtcgatgtctcaggtaaaaaataaaattcatgattgtaccacgactcgtggttcacatttttggataagaaatttccgaaaaaaaaaacacccgaacttatctgaattattcagcataaaatttcttggaattcagccaaaaaactgttgaatgacttgcgaattgcctctcgtgagggatttatttatttgttttgttggtttcagggttcaggaaggaggagctgaaggtgctgtacaacaccagccggaagctgaaggtcgccggcgagcggcgggccgacggcggccaatgggcacgcttcctcaagatgtttccggtcccgaggagctgcgacgccggcgccatcagggccgtcatggacaacgaggaagccctgctctacgtcatcctgcccaagggatcatcgtcttcttcctcctcctccagggacaagaaggaagatgaacacaatgtgagctcccagcctcagggagaagcagccatggcgcccatggcggatgggccatcaagcagcagcggcggcggtggcaatctgtacatcgcccaggaagacgaagagatgggcaagattgatgagaaagaagaggtgattgccacgcaggatgtgccaagaacacacggcgatgtggatgatggtaacgggagatggtggcagagggtcaggcctatgaatgttcttggcgttgctctcatccttgcagtggcttgcgttggagcctatgtgctgtgcttgatgctgctgtgaatcgtagcatgtgaattaatcgcttgtgtaaatgtgtttgttgctcatgtgaattacaattgtcactgttagcttgggactggtttgctacatacgagctcatcaatgaatgtgaatacaataacatatatggcattctgctttcctagtgttagattctagttgtaaattgtaacgcttctgttttgcaattcaactcatggagctcagaaaaggaaacagtggacgatgcaattcgatgcgaatttgtgattctgttttgttctaagagaagacaatgccccaaacgcagcctcaaattacccaccaaatggcgatgttggctcttttcaacaagcaaagataagcactattggacacctcaattttgcactattggaaatctcattttgcgctggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttcacctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgtcaagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgggggagtggatgtcatacacaccctcgcggaagacggacaggagcttctcatcggttcgggagttctcgatggagctcctggataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0656000, RefSeq:Os03g0656000