Os03g0656900

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Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0656900| Description = NusB/RsmB/TIM44 domain containing protein| Version = NM_001057346.1 GI:115454420 GeneID:4333618| Length = 4016 bp| ...")
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Gene Name

Os03g0656900

Description

NusB/RsmB/TIM44 domain containing protein

Version

NM_001057346.1 GI:115454420 GeneID:4333618

Length

4016 bp

Definition

Oryza sativa Japonica Group Os03g0656900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26387424..26391439

Sequence Coding Region

26387533..26387810,26387900..26387976,26388139..26388273,26388970..26389024,26389150..26389237
,26390494..26390592,26390681..26390812

Expression

GEO Profiles:Os03g0656900

Genome Context

<gbrowseImage1> name=NC_008396:26387424..26391439 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26387424..26391439 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagcgacgggcgccgccgtatccgccttctccaccgcgtcctcgtcgagtcccgcggcgcctagacacggccgtctcctggcgagccccgcggcgtggcgcagcgcacggacgctgccaccacgggccgtcgcctcctcccgcgcgacggtcctcgtctcgaaccctcctccgccgccgctgccgccgacacccgctcctgctgcggtcgcgccctccaaggtcgaccggtccgggcggttctgtagcccccgcgccgctcgcgagctcgcgctgatgatttcctacgcggcttgccttgagggcgccgacgtggtgcggctcttcgaccgcagaatcagcgcgagaagagaacctggctatgttttcgataaggcgtgcgtggtgaactacaaccatatgagcttcggtgggggacctctggaggtcgggacagaggaggaggctgagaagctcatgagtcagaacgagaaggattcagcaaatgaagcagaagttctttcagctcctccaaagctggtgtacaacaactttgtgttacgactggctcgagaaattttagtggctgttgccagtggatgggacaagcatgttgatatcatcaacaaaataactccccagaattggaaggacgaacctgttgcaaggatccttgaactttgtattcttcatattgccatggcagagatgacatcaaaaggaacacctcacaaaattgtcattaacgaggctgtggatttggcaaaacggttctgtgatggtggtgctcctcgggtaatcaatggatgccttcggacatttgtgaaggatcacatgaacattgacaccagtcagccagctccagctgagtcaaaagcgtga</cdnaseq>

Protein Sequence

<aaseq>MEATGAAVSAFSTASSSSPAAPRHGRLLASPAAWRSARTLPPRA VASSRATVLVSNPPPPPLPPTPAPAAVAPSKVDRSGRFCSPRAARELALMISYAACLE GADVVRLFDRRISARREPGYVFDKACVVNYNHMSFGGGPLEVGTEEEAEKLMSQNEKD SANEAEVLSAPPKLVYNNFVLRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARI LELCILHIAMAEMTSKGTPHKIVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNID TSQPAPAESKA</aaseq>

Gene Sequence

<dnaseqindica>110..387#477..553#716..850#1547..1601#1727..1814#3071..3169#3258..3389#atttctctttctcccacctccaccggcgacgccaccgccgccgcctcctcctcctccgcctctctacggcagcctcgccgccgcgccgcgcagcgcagcgcagagcaacatggaagcgacgggcgccgccgtatccgccttctccaccgcgtcctcgtcgagtcccgcggcgcctagacacggccgtctcctggcgagccccgcggcgtggcgcagcgcacggacgctgccaccacgggccgtcgcctcctcccgcgcgacggtcctcgtctcgaaccctcctccgccgccgctgccgccgacacccgctcctgctgcggtcgcgccctccaaggtcgaccggtccgggcggttctgtagcccccgcgccgctcgcgagctcgcgctgtgagtcctcgccctcgagcccgagaactttgggctgcttgattcggttcgtatttgtcgctaatggctgcctgccaccgtgcttgcaggatgatttcctacgcggcttgccttgagggcgccgacgtggtgcggctcttcgaccgcagaatcagcgcgagaagaggtgagcctcctcctgacgcctcttagcttctttgcactatccttgtgatccactagcagcatcactgtgctgcacaatggcttcaattgtttggccttcgttggatagatgaatttggtttctctttgcctcattctggtcttgttctatatgattttgcagaacctggctatgttttcgataaggcgtgcgtggtgaactacaaccatatgagcttcggtgggggacctctggaggtcgggacagaggaggaggctgagaagctcatgagtcagaacgagaaggattcagcaaatggtaacaacttttttgcaaatgttattctcattgaaactagttctgcatcttgctggatgaaaattggggatatagcactggcacatgatcttacttaactatttcttcaagagctcattaactaatcggctaatcgcaatgactaatcctgcaagttcaatcacttgccattttgcaagagcaaaagtcccctagattaccctaatcctgtccttaatacgaagtcaatgtcacaatcgcaatgctattggttttatggcaatgatattatgcttgccttttataaacatttggaatataatatgtgtttttttgcagtatatttattcaggaaataatgtatccttttttttaaaaaaaaactgtgagtatttttagataatactccctccgtcccataatataagagattttgagtttttccttgtactgtttgaccactcgtcttattcaaaaaaaaaaatggaattactattttgtttgacttactttattatctaaagtacattaagcacaacttttcgttttttatatttgcacaaattttttgaataagacgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggagggagtatgttcacaacatgtctctgtagtatattcttgatgaattatttaatttgacacaagattcattgtcttgtaattcagaagcagaagttctttcagctcctccaaagctggtgtacaacaactttgtgttacggtatttttttcttctctcctctttttggttggtataatcacataatggacactgttgtttaggtaacgtgtttttacgtgcggggtccttgtaggtatttttctaattacatgctttctgaacagactggctcgagaaattttagtggctgttgccagtggatgggacaagcatgttgatatcatcaacaaaataactccccagaattggaaggttggatactttttttcccagtgttgtatatcgatccatcaaatctttgtacttgcttgctaaatcgtgcataagtagaatgcttgttgatttaattgaaaggcgctatatattattagagaacataatccctcagtaatcactagtactgaattatatatgcatcttgttactatattgtgtaacaatctagttggagctgcttttgcctcatcaccgtgctaaattatcgaacatttaggaacagggttatacctgccatttgatcattcctatgatcaatttctcaagtaaaacctgcatcttaggagtaggttacttgccaaataaaaccatttgtcacataatatttttaatacatttttttaacctttaacttacatcccactaaaaaaaagtcaactcatggaatttcagactactatgtatagtttccactttaaacagctgtcaatgtgatggattgggatgttcccaagccccgaagcgagtgcacagttggcctactataatgaccaaaaggtgtagcaccagagccccacaactttgatttatggggatcaaaactgaaagtaaatggtgtgattgagctcacaatgaaactctcagtcacagtaaatgagagttgattgtattgattggttgcatgtaatgattaatgtttgggtagtataagtttattattagcgtagttgttgtgtagcagacaggctgtaaatgaatcattaatagagagggcttagaggggtgggaaaagaggatattgtagttaagtttatactaaaaagaagggtataaaggattcgttaatagtaattaaaagctaaacaaaaattgaggcctctaaatttttcgtgcccgtgcatcttgagcaagccacatttgaaccatgttaggtgcttgttcaccaccttttgctatggctgtaggcatccctcgatgcaaaagccaggatttccctgttatctttgcattgctcacctggttcatttccccttctatggggcttgatttcctacaggcatagttgtcatatagaggtgctagttatttaatacatcagctaccttcttgaaatatctgaaattttccatcaatgttagttgattctacccaaagatccctgtttttctaaacaaaaattttaagaatatgaaagacaataggttgcccaatcacatgcttaattgctgatttaaatgatcatgttttgcttctatttaatttttgctgactcgccaaaattctgtgggcaggacgaacctgttgcaaggatccttgaactttgtattcttcatattgccatggcagagatgacatcaaaaggaacacctcacaaaattgtcattaacgaggttaccattttatcacaatctccttcatattttaagtttgacaaaagaaacatataaatatctatcttgttatgtccattgatgataggctgtggatttggcaaaacggttctgtgatggtggtgctcctcgggtaatcaatggatgccttcggacatttgtgaaggatcacatgaacattgacaccagtcagccagctccagctgagtcaaaagcgtgaagtttttgcaaatatgaaaatatgaatcatcacaaatatgattcaaagaatagaagcacggagaaaatcctgctctctttgtctgatctcctttggttgtttaaagattgattggtgaagttgaaaggaggcaaacatgctggacttgtggagaactagaagtatcttcaatatttagctggtggttagactagatatgttgagccatatactgatgatgcactcttcttgaagaactaaatgacactacttctaacagcttttgccatgctgattcctgtgcttaatgggacaagagaacctgtatcatagtgtatgtgtaaagttgcaaggtaagggttgcatctctcaatttcacaataacgtgcttgagctgctgagtaagttgggagttgggagtttgcagctgatactatggaagatgcattttctccaagatttggatatgatatattgtgtaattctacctgcacacgagttctgttcaaatataaatttggtacacctctaatagtatttgtattgtatatggctgcaaacttttcctacgaaattctttgtaagtagcatgggttgtaacctgcttaacgatccaatgattgctgctttaattaataagtttgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0656900, RefSeq:Os03g0656900