Os10g0335200

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0335200| Description = HNH nuclease domain containing protein| Version = NM_001070907.1 GI:115481557 GeneID:4348343| Length = 3853 bp| Def...")
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Gene Name

Os10g0335200

Description

HNH nuclease domain containing protein

Version

NM_001070907.1 GI:115481557 GeneID:4348343

Length

3853 bp

Definition

Oryza sativa Japonica Group Os10g0335200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:9820775..9824627

Sequence Coding Region

9820880..9821138,9822803..9822925,9823952..9824106

Expression

GEO Profiles:Os10g0335200

Genome Context

<gbrowseImage1> name=NC_008403:9820775..9824627 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:9820775..9824627 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccctcctctccccgccgcgacctcgacggcgaggggaccggcggcgggagctcggcggcgagggagaaggagcggccgaggtccttcgacgagaagacccggtcggcgtgctggcggaaggcggcggtggtgatgggccggcacccggagcggtggcggcaggacgccgccggcaacgtcgtgtgccgccgcttctggagctgccacggctgcctctgctacgagtacgaccacatcgtccccttctccaaaggaggggagtctactgttgacaattgccagattcttcagacaagggtgaatcggtcaaaatctgataaagcatggatagagcaggcagaaatgcagggattttcttgtgatatcaagttcactgataaagaacttgatgtgattgaaatggctgtctatggggatgtcatccgtcctggaaagcaatgtcgctgcaggacagtagctgagatgcttgggaaggtgaagtcaaagaatcagatggctgcttgcgagttgccacataatgatgcctcctag</cdnaseq>

Protein Sequence

<aaseq>MAPSSPRRDLDGEGTGGGSSAAREKERPRSFDEKTRSACWRKAA VVMGRHPERWRQDAAGNVVCRRFWSCHGCLCYEYDHIVPFSKGGESTVDNCQILQTRV NRSKSDKAWIEQAEMQGFSCDIKFTDKELDVIEMAVYGDVIRPGKQCRCRTVAEMLGK VKSKNQMAACELPHNDAS</aaseq>

Gene Sequence

<dnaseqindica>106..364#2029..2151#3178..3332#agggtgctgcatcgacgttttcaaatcatagggggtatttggacttaaaaaaaaatgaaaacgcgaatataccagccgaaagtaaagctgcggcggctggggtgaatggctccctcctctccccgccgcgacctcgacggcgaggggaccggcggcgggagctcggcggcgagggagaaggagcggccgaggtccttcgacgagaagacccggtcggcgtgctggcggaaggcggcggtggtgatgggccggcacccggagcggtggcggcaggacgccgccggcaacgtcgtgtgccgccgcttctggagctgccacggctgcctctgctacgagtacgaccacatcgtccccttctccaaaggtgcgtcccctccttcttgcccactcgatttagggagaatcctcaagttttccgtttcttgcttggagaggtggtggtcgatccgtcaagttcgtatctgtaggattctgatgcgtttgcttgccgcggtgtagttgcaatgttggatactcggactatttttgctcgatcaagtattggaggagttgtcgctgagttgagttcatccgcagatgagcactaattttgttttattcagaggaacatttagattaaggttgggatgtttaaaatcggatatgagtacacaggtgagttcagatggagaaattttagcctaatctcctgtgggtcagtagatgataattggaatctgtaatgccgtatgtttttgtttttttactaagtaaatcatttatgtttagttaaattagggggagatgccttctccaatcaataaagatggctgtgcaacaatatcatgtaacatttagcaatccatgttaagcaagaaacatgtatttttctttggatttctatcacttgtgagtattcatatcagtattattgaatattaaactaggcatcgttcgttcctgggcaatctgggggattgagagagaaaagcatctcgttttccgcgcgcatgcttcccaaattgttaaacggtgtgttttttacaaaaaatttctataggaaagttgctttaaaaaatcatattaatccatttttgaagtttaaaatagttaatactcaattaatcatgtgctaatggcttacctcgttttgcgtatcttcccaatctccccaatctccccaatccccttctcctcagacttggttcagatcagttatttgttataaaggctgacacaacttggttttaaatcagcgtacttggtacttatatagcctttgcttgtctaatttaactatgaattgttaacataataccatatatggagcgcacctgtggttttcaaactaatgcctatacaaaactgcaagttttaacagttctacttcactcctttggtaaccgcacacatactccgtactatttattggctttaccgaaataaaatctgatattgatgttggaacagtcccacttcataggctagtttttgggatgaaaagtcattttgtttcaacaaattggcatgagaacattactgtgtgaacgccataaatggtgggtggatatggggtctttgatccgagagtctgtagttgtatggttaaggagaacaaacaaggcgagattgttggacctcacataagttgcggaagggtccaactgaaaaatgggcaagaccctcatcccggaaactatcttttgcggatgagaaaggccctttacgattcaatgcttagaatattgtctttgatgctattaagattccctgctttatactgatatgttttactgttctgctgttagcatcccttagtttataattaccaggtctgaaaattgatgcctattcttccaaattgtgctaaatttgggatcagtgctggccctactttactttgtaggttggacacttggtttgtaacaaagtcatcttccaatcctttgtctatttctctgttatttgtacaatttgttttccattatactcagattttctcatgttgattgttctggaactggaattgaattttttgtcatgctttaggaggggagtctactgttgacaattgccagattcttcagacaagggtgaatcggtcaaaatctgataaagcatggatagagcaggcagaaatgcagggattttcttgtgatatcaagttcactggtgagtatgtcgatattgcgattcatttgctcccatggatctttataatgtatgtgtagtagtccctctgatttcttatgtttaacagaataaacagcttgcaatatgcaatgcatgatttttcataatgtcattggtctgctgtacatgcttatatgtccattggtatgctgctcccttagcaattataaatggtatagatggatggtaatagatgttctgttatgcgttatccacgtattaatggctgtgtatgtttcgatgttctttgaaatagtgaaattaaatttgcagaggtggggatgttgcaccgtactgttatcaatataaaacaagttacctttgagccatctgagaacaattctatggagctagattacaatttttctctagaattgttcattgtacattccattattaacaattgcttcgaaaaattgctttgttactgtgaataattaggatcatgatgcatttgtctataagcaaggtgctataaaattgtactttttgaactagccataaaacttcaaaacaatcatgactttgtaaaaataaacaagtaatttcagataatatctatttcatgcgtttgttttggcaaactatgctgatttggccagaggataaaaagtttcaacaaataacatacatgggacctatttggggtagcttatagctgctgcagcccccaaacagtccagattgttacccagattctgagaatctgtaattgtagaatccggaactagaatccagaagctggaaaacccagcttctccagattctcggaagctagctactaaccagcagattcttagaatcttaagctcccccaaatagggccatggactgctcttatttatttttatatcttaagttgtcttctcattcctgaatcaggagatccaactgaatctctaatcgaacgtaactgttgtgccaactctatttagcatgaaaaacctaccatggtagtttcgtatgacatgcaaatttaatctgatagtgttttttctttgtcagataaagaacttgatgtgattgaaatggctgtctatggggatgtcatccgtcctggaaagcaatgtcgctgcaggacagtagctgagatgcttgggaaggtgaagtcaaagaatcagatggctgcttgcgagttgccacataatgatgcctcctagcataagtcatatcgttctgcacaactacaccagattcattatggtccgcacgggcagcaagcctgagatcactaccctgatttcatgctctattgtgataatgaacatatttgactttaggatctcttacattggttgtaacaccgttacaccaacatggtgtgctaggttagatcagttccgtgttgatttgtgcaattggactggctagttcggttcctttcaccctgggtagtttcaacttacatggtactatctatggttcattagctgggttggtttatctatagttgggtctctagagaattttaggacctaatagaaagagagatcgattttgtaattggtagccacttgccagtttgtgaaacaaaactgaagtggtatgtgagcagtaggaactgaacaagaaatgcattgccgaaatgtcgcagtaactgtagcctgcacgctgcagttaattgctctgtgacatttgccattcctatgttcctggaaaatcaaagaggcacacaagtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0335200, RefSeq:Os10g0335200