Os03g0663700

From RiceWiki
Revision as of 12:51, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0663700| Description = Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein)...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0663700

Description

Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein)

Version

NM_001057369.1 GI:115454466 GeneID:4333650

Length

4622 bp

Definition

Oryza sativa Japonica Group Os03g0663700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26824531..26829152

Sequence Coding Region

26827201..26827344,26827571..26827764,26827875..26827983,26828102..26828250,26828348..26828576

Expression

GEO Profiles:Os03g0663700

Genome Context

<gbrowseImage1> name=NC_008396:26824531..26829152 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26824531..26829152 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tatagcagatattgcctagttgccagcaagcaaatggttggtgtttttctcatggtttgggtacgaagtgatataagggaacatgtgaagaacttgaaggtttcatgtgttggcagaggtttgatgggatatctcggaaataagggatcgatatcaatcagcatgtctctgcatcagacaagcttctgctttgtttgcactcacttgacctcagggcaaaaggacggtgatgaacttagaagaaatgcagatgttgtagaaattttgaggaagaccagattcccacatgtccatggtgtaggtgacgagaagtcaccggagacaattcttgaccatgatcgtataatatggcttggggatcttaattaccgaatagctctttcataccgttcggtgaaggctctagttgagatgcacaattggaaacagttactagagaaggaccagcttcgaatagagcaaaggtatggtcgggtattttcaggctggaaagaagggaggatttattttcctcccacatacaaatactcctacaattctgacagatacgcaggcgacgatatgcgtccgaatgagaagcgaagaacacctgcatggtgcgaccggattctatggtatgggagaggcctgaatcaactatgttatgttcgcggcgagtctagattctcagatcacaggcctgtatacagcattttcactgcggaggttcagataccgagccaaacccaattttgcagctttgctcgttctacctctctaatgggggtggatgaactaccatacccaacttatccacgcagttacacagatatcaatttttattga</cdnaseq>

Protein Sequence

<aaseq>YSRYCLVASKQMVGVFLMVWVRSDIREHVKNLKVSCVGRGLMGY LGNKGSISISMSLHQTSFCFVCTHLTSGQKDGDELRRNADVVEILRKTRFPHVHGVGD EKSPETILDHDRIIWLGDLNYRIALSYRSVKALVEMHNWKQLLEKDQLRIEQRYGRVF SGWKEGRIYFPPTYKYSYNSDRYAGDDMRPNEKRRTPAWCDRILWYGRGLNQLCYVRG ESRFSDHRPVYSIFTAEVQIPSQTQFCSFARSTSLMGVDELPYPTYPRSYTDINFY</aaseq>

Gene Sequence

<dnaseqindica>2671..2814#3041..3234#3345..3453#3572..3720#3818..4046#agtactcctactgctgctactctactccctcctctctccagctgctcgtctccttgggcaacggagagcgcaagcacactagcacagctgcacaggcacagctgcacagctcagtgtgtccttccttgcactgtcctctgcgccagccaccttgcatctcctccctctttccctctccggtccttcaaatcctgagctgagctgccccgggttgggttcttgcattgcttgaggtggtcgcatccgtgtgtgtgtgtcctcggcaccgcgtgttttccttggattcaggtgctacggccatttactactgctgcccccctggtcgtttcagcaggccggaggcattaacttccactggcattgatttgatccctgtcatggtgagcttgttggctactgcgtggggctgaccattcccggagtctctcggctatctttgatcctactcctggtttagttcctgaaatcttgcggtttttttcttcttcggtggctgccgttcttgatgttcctgcccaagtgactggtttatcttgctctccatcaattcggttttgggttgctgcggtggattctttgctccccttcgagatactgcttggatcattagttcattacacggttagcagaggaactcttggagttggggattcctttgttcttcttttcacagtttggaatatcaggagctggcttggaatcttccaagcaaggggaaaaagttctctgggatagggagaaacagaatcctgttcttccccctttcattccactagtatatactgctctgagaggagcaattggaggcatggtttggattttggtggtttgaggagggaagaagcatccctggagctgtatgaggaggcattgagacaatgagagatgagaattcaatcaagaccaaggtaagggtgccacagagcaagagctagtctgttcataatatctatatttatattgtttttgtcctgattgtttctgatcttgtttttgttctgaactggcctggaagaagctatcctggtccaagacctttgttaggaagtggttcaacatcaaaacaaaagccaaggacttccattcagattatgcagttgaagaaggtacaacttattgacttaataccaccactctcacttctgaattaatgagcttgagttaccaggtgtttgtttttctccttatattctttggtatccttttcacagtcgtaaattgttgtattttggtgttcagtactaacagtgtgtcgaattccagaagcaagtctgagcacttgcttccagttctcttgtatagtgagatattatttattgtttcagaaacagccatagcatgcttgagacctacagaaagaattttgttttggcgtggtggtgctaaaaacctctttctgatcatttcagtaggtgtccagtggagaaccagtttctcagagagagatgtatgcaaatccaagaaaagcagaacaggtacattttgcttgcctcatcacagtaaatattgtattctcacatctcttacctttgtatttgagtaaaaactgaactggaacctccagtcaacattgtcctatgcttgactgtattagtgatgtgtttactcagagaggttgcctaggaagagtgtggatcgagattcccgggtaggaaatggatttgaccgtgcttatatcacaaatacacaagactacaggtaaatagattgtgcctttttagaacttaatcgatccagtagtcgttgttagggaatttctctgatttgacattccgtatgctcgtatgcacagggtctttgttgcaacatggaatgtgggtggaaggtcaccatcgagtcatttgaatttggaagactggcttcatacttctccggctgctgatatatatgtcattgggtacaatccagattcatgcagtgacttaaatcatattgtgttttctttacaaaatattgttcatctaaaaaagatctagcatgcataaaaagaaaactattaacacttttttatcgtaccaggttacaggaaattgttcctttgaatgctggcaatgtcctattgaccgaagacaatggtccagcaaagaaatgggtcgcacttgttagaaaaacgctaaacaatatagaccaaggctctgttgtgtacaactaccacaccccttcgccggttccagatcctattgttgagctcaatgttgattttgaacgatcatcaagaagaccaaggaattcatctttcttccatcgacgttcattccagtccttcaaccgaagctcaagaattgacatgatggatccccactcattagtggatcgtcgtttcagtgtttgtgaccggattagctttgggagtaggccaagtgatgttgacaccagtatgagatatggtgggtcatctgatgatgagaatattgacgaggaatcacctagtggtatatacatctcaccaatgccatacggttatggtgctccactatgctatgatgataacaaaagacagttgataaacactaggtaggtttccatgagactctgaagatacagtcgttctgaaacttgctagctgttgtagctggcacttctatactattaacatttcactgaaattccttccatccttcatcactggaatgatacaaatatttgccctgaaaatagagttttctgtaatatagcagatattgcctagttgccagcaagcaaatggttggtgtttttctcatggtttgggtacgaagtgatataagggaacatgtgaagaacttgaaggtttcatgtgttggcagaggtttgatgggatatctcggaaataaggtatcgttttccgcttttccatttctcgtaattgtgtgctacttaaatcttatactcatcaatctttgcagatacgttagtcttttctgtcaagaagtgtagatgatttatcatttatgcttattgaatttcacctgacatcctgtttgcatgtgcatccatatgtttgtttacatatgattatgtagctccatttgtcctcactttcttctcttatattaattagggatcgatatcaatcagcatgtctctgcatcagacaagcttctgctttgtttgcactcacttgacctcagggcaaaaggacggtgatgaacttagaagaaatgcagatgttgtagaaattttgaggaagaccagattcccacatgtccatggtgtaggtgacgagaagtcaccggagacaattcttgaccatgagtaagtctcatgttgcaatagtttcagcttggataaacacgttgaatagaacaaaatttgaaattattggatataacaatcttagcctatcatttattttgttttttcagtcgtataatatggcttggggatcttaattaccgaatagctctttcataccgttcggtgaaggctctagttgagatgcacaattggaaacagttactagagaaggaccaggttagctattcttacaaaaactgctaacagtgtcatgcctcttacaataaactagtgtagctacgaaaaatgtggtctccttttctttttcttctcatgtagaacatttttgtaacagcttcgaatagagcaaaggtatggtcgggtattttcaggctggaaagaagggaggatttattttcctcccacatacaaatactcctacaattctgacagatacgcaggcgacgatatgcgtccgaatgagaagcgaagaacacctgcatggtaagttaaaatattattacagcaaaccattcacccttcttcagagtttacaccttcacctttttggcttgtgcttattgtaatggtttttctgaaggtgcgaccggattctatggtatgggagaggcctgaatcaactatgttatgttcgcggcgagtctagattctcagatcacaggcctgtatacagcattttcactgcggaggttcagataccgagccaaacccaattttgcagctttgctcgttctacctctctaatgggggtggatgaactaccatacccaacttatccacgcagttacacagatatcaatttttattgattgtgtatctcgatggagccaaggttagtgttctttatcccatgtagtcgcattgtttgggcttgttggtctgaccacttctctgaattccatgccaaagtgctctattcatcataacttccatctgttcattgcagacattcttcagtcccagaatacaccagatgaacttcatttctcccaagattccagcaattggaatattgtcagccaacaggtgattcctgaactattgtttcttttgcccccttcagtgtttgtgcctcatcatgtatcctagtacatccacaatgtatgatgaacatgatatgttttttaattatcttttggcaaatttactgcgactgatacgtcaattccgaccttttgtgtgcatgcagatactcaaggagatgctttctaattgtaaaattaggtatgttctacaagactgcttgtacatcactaccatatgtgtgattagtacagataaattgaatgactaagatatctttgcacttgtcaacaggaagatttgcgcagtcaagcaaagttttgaatctaacaatccgcgagtaccagtttacaacagcaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0663700, RefSeq:Os03g0663700