Os03g0667500

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Revision as of 12:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0667500| Description = Similar to Metal transport protein| Version = NM_001057388.1 GI:115454504 GeneID:4333669| Length = 5765 bp| Definit...")
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Gene Name

Os03g0667500

Description

Similar to Metal transport protein

Version

NM_001057388.1 GI:115454504 GeneID:4333669

Length

5765 bp

Definition

Oryza sativa Japonica Group Os03g0667500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27046637..27052401

Sequence Coding Region

27046862..27047317,27051678..27052346

Expression

GEO Profiles:Os03g0667500

Genome Context

<gbrowseImage1> name=NC_008396:27046637..27052401 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27046637..27052401 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgccgcggacactggtgcccattctgccgcccgtcgcggcgctcctcctcctcctcgtcgccgcctcctccatccccatcctcgccgccgcgcagccggcggacgcgtgcggcggcgcaccggatcaggcggcggcggacggcgcgtgccacgacgtgccgagggcgctgcggctgaagctgatcgccatcccgaccatcctcgtgtcgagcgtcgtcggcgtgtgcctgccgctcctctcccgctccgtgccggcgctccgccccgacggcggcctcttcgccgtcgtcaaggcgttcgcgtcgggcgtcatcctcgccacgggctacatgcacgtgctcccggacgccttcaacaacctcacctcgccgtgcctgcccaggaagccgtggtcggagttcccgttcgcggcgttcgtcgccatgctcgccgccgtgtccacgctcatggccgactcgctcatgctcacctactacaaccgcagcaagccccggccgtctagcggcggcgacgtcgccgccgtcgccgaccacggcgagagccccgaccagggccaccggcacggacacggacacggccatgggcatggcatggcggtggccaagcccgacgacgtcgaggccactcaggtgcagctgcgccggaaccgcgtcgtcgttcaggtcctcgagataggcatcgtggtgcactcggtggtgatcggcctcggcatgggggcgtcgcagaacgtgtgcaccatccggccgctggtggcggcgatgtgcttccaccagatgttcgaggggatgggcctcggcggctgcatcctgcaggcggagtacggccgccggatgaggtcggtgctcgtcttcttcttctccaccacgacgccgttcggcatcgccctcggcctcgccctgaccagggtgtacagggacaacagcccgacggcgctcatcgtcgtcggcctcctcaacgccgcctccgcggggctgctccactacatggcgctggtggagctcctcgccgccgacttcatggggcccaagctgcagggcaacgtccgcctccagctcgccgccttcctcgccgtcctcctcggcgccggcggcatgtccgtcatggccaagtgggcgtga</cdnaseq>

Protein Sequence

<aaseq>MATPRTLVPILPPVAALLLLLVAASSIPILAAAQPADACGGAPD QAAADGACHDVPRALRLKLIAIPTILVSSVVGVCLPLLSRSVPALRPDGGLFAVVKAF ASGVILATGYMHVLPDAFNNLTSPCLPRKPWSEFPFAAFVAMLAAVSTLMADSLMLTY YNRSKPRPSSGGDVAAVADHGESPDQGHRHGHGHGHGHGMAVAKPDDVEATQVQLRRN RVVVQVLEIGIVVHSVVIGLGMGASQNVCTIRPLVAAMCFHQMFEGMGLGGCILQAEY GRRMRSVLVFFFSTTTPFGIALGLALTRVYRDNSPTALIVVGLLNAASAGLLHYMALV ELLAADFMGPKLQGNVRLQLAAFLAVLLGAGGMSVMAKWA</aaseq>

Gene Sequence

<dnaseqindica>5085..5540#56..724#aagcaagcagcgcgcctgagtacgtagcaaaatccagtgtggtgtacgaacgaaaatggcgacgccgcggacactggtgcccattctgccgcccgtcgcggcgctcctcctcctcctcgtcgccgcctcctccatccccatcctcgccgccgcgcagccggcggacgcgtgcggcggcgcaccggatcaggcggcggcggacggcgcgtgccacgacgtgccgagggcgctgcggctgaagctgatcgccatcccgaccatcctcgtgtcgagcgtcgtcggcgtgtgcctgccgctcctctcccgctccgtgccggcgctccgccccgacggcggcctcttcgccgtcgtcaaggcgttcgcgtcgggcgtcatcctcgccacgggctacatgcacgtgctcccggacgccttcaacaacctcacctcgccgtgcctgcccaggaagccgtggtcggagttcccgttcgcggcgttcgtcgccatgctcgccgccgtgtccacgctcatggccgactcgctcatgctcacctactacaaccgcagcaagccccggccgtctagcggcggcgacgtcgccgccgtcgccgaccacggcgagagccccgaccagggccaccggcacggacacggacacggccatgggcatggcatggcggtggccaagcccgacgacgtcgaggccactcaggtgcagctgcgccggaaccgcgtcgtcgttcaggtaacgtgtctcatgcgttgcagctcactagcaaagctgtaacctcacatcacacacccaactgcgtaattaattaaggctgcgttctaacctcaaggttcccaacctttctctctcgttttccgcgcgcacgcttttcaaactgctaaacggtacgtttttttttaaaaagtttctttacaaaagttgcttaaaaaaattaaattaatccatttttttaaaaaatagctaatacttaattaatcgcacgctaatagactgctccgtttttcgtgcggaagggttgggtcccaacccattctatcacacgcagccttaagaacgcagttgaatatggcaattccaactttttaaccactagttattcttaaataattattgaactaccataaacgaaatcatgtttaaatttacggtgcaatatgctgtgatagcatggtccataatctttttagtatttgcaaaaaagaaattaaaaaaacagacgacaaaatgaatagtgcccacttattaaaaaacaggagtaatcgagtgataattaattgagtttgtttgatctctactacttccagtctataattcttacattttggacattggcacattctttaaaatatatctttgattacattttttctattataatatatgtaataaataaacatatttttatcttttttcttataataccttgtaagacaaatctatacatgttgttttaatgtctttaaactaaatattttaaagttaatgataatcaaagtgataaaagtttaatcttaacgtacactaaaaatcaccctcaatgtgtaatatcctcttaggtcataaggtgggtccagtcattagataaaattgttgctacaatgtatatggaagaggaggcattagctaggtcccactcaatcaaaatccatgttggggggagagggaagaggagagagaaattatactccctccgtctctaaatatttgacgtcgttgacttttttaaacatgtttgaccgtttgtcttattccaaaaatttaagtaattattaattcttttccaaccatttgattcattcttaaatatactactactactacttctcaagtttttgaataatattcacgaaagttttttaataagacgaacggttaaacatgtttaaaaaagtcaacggcgttaaatactccctccgtactcgtaaaggaagtcgtttaggacagcgacacggtctccaaaacacaaatttgacttcttatttctataaaaatatttattaaaaagtgatatatgtatacttttataaaagtatttttcaagaccaatctattcatataatttttacattttcaaacgggagaatagctaatatagtccctcaagtttcatcgaaggctcaatttagtccttcacgttttattttgtccacatagtatttgttttggcttgaaatcatccttgggcccacttaatatgccatatggctatttctagtcaatatttctattagaaaatgtcccttttgcccttaatttgtatacaactataactagaaaagagaaaaccaagatgaataaaataaattgcagatgtactttcggcctattattttaacatgtgcacatgaaacttaagcaattgctattgtatacactttgctagtatataatttatttttattttatacaatttactatgcattatctataaaaaaaatcaagcatgcaattttttctcttatatatgtgaatgatgggggggtataagtgtcatttatgaagagagttgttagttcaaggataagtttgaactaaaatgaaaacttgaaggactaatatggatagattgaaacatcaaggactaaactgagcctcagatgaaacttggaggaccactttaactatttacccttttcaaactcaataacttaaaagttatttatgatttatattcccaaggtttgacttaaacattatcataaacgactttctttacgagtacggaggaagtatctagggacggagggagtatattgttttttttttatatgggtagctcaacatctcgacataaagaccacttgtcttgtagtatatcgtacctcctcagtcaagttaggtaaatcaagaattccaaagcaagagggatctatagtcgttagcctaatctcaaggacgcttccgtacggttcgtaaagaaaatcttcgagatagtaggttagtagtcatgttcagtgaactcatagagtcgagttaattgacaaactagaaggtgcccgtagctttaaattatgtggaacctgcaggagataaccactccatattgactcgatgttttttattcatgaaaatgacacgagcggactagcttgtcatgaaaagtttcaacaacagtcacttttgtagtttcactgtactgtaacatgttacggctggccatcaagatgaattagtcatcggaacttcttaattagttcgagaaaatattgtaatgttgaaagggaacaaattacgttaggttttgctcttaggctgagtttgaaaagagaggtagggagattaagctttttcttgaataaaagatgaaagtcgttagcatacaattaattaattaagtattagctattgtgaacttggaaaatatttttatttttatttgattttaaaataagtttctatataaaagtttttttagaaaaatatagtacaatttaataatttaggaaacatgctatcgttaaagatggagtagctcacttcaactgttcagttgttcagaactcaggcttagatattactccctccatcccaaattgatcattatagtatatgtttatacaccaagactaaggataatttgaatcgcattaatcaagacaccatgcacacattatctcacaatgcatgcatcgattaaaacaccatgccaattatacccttagcatacacacattctcccttgctacattaattgtattccgataaaatccgtatccgtacggttatatgatgatcaatttgagaaattttagattttgttgtatgatgatcaatttggaacggatggagtactacttatctatgatacgccattgtaattcatgcccatttaaaaaataaatttaataaataggttaaacaagtggtataaatcatgtctcagaatttattttaagaaagcatattttaaagtgtagaacaaataatcatctagctggctttcgggctttggtgagtcgtccgagatcctttcgatgagatatctatatgatccgttcaggaaaatgaatatctccagaaaatatttttagttccgtatggcttttttttctcttcactcgaaccaatccacctagattttaataatacgatgaataatctgaaaagaatatgacctcaatcacaaaatattaaattgaggtcctgtaattttccatgtatttcagtagaaagtattcaaactaactgggagatgtttttaatacaaatcatctttcatatcctacacaaaatatttctatgctaagcaatttctctctcatataacacataaaaataacttttaaaatatataaataacaaaacaaaacttgaagcttatataaaaacgttcatgttgtgtaagaacaaaacatacaaaaatccatattaaacttttaatgaaataaatcaattattaaccttgtaattttgggtatttttaaaacaagacctaaactaataatataatgtagagcaatcgatgaactcgtcggtatattataaaaagaagcaatatcaatgataaatcgttaaactaggacatatatagtagattatctcttggaataaaagattgagaatcatacgaaatttgtttggaacaatatattcaatgagattttggagaaaagttaatatgaggttgaatctctccgaagattttcttggactcactcactcactctcattcaattcttgtatttttctgtagcctatccaaattattattactgtatttttttagtgtgtgttttgcataagtatcctaccaaaatcttgtacgtttccttttatatgctttaaaactcctatatttcaaaggaagacatattgttggcaaatagcaagcggacataaaccagatatcttcttttctcctttaaattatatgtagtttcacaagcaaaataagtgatgttttatacttaatttacagccagcttcttgtcgagtactagttgtaaagtactctcgattaagataactttgaggctaattagtcattagatttttttgaaacaatatggtcggtcaaactacaactatgcaacttaaaagcgaaaaaccaaaaaatatactgaccagatttgcacggcttcatatgctgcaggtcctcgagataggcatcgtggtgcactcggtggtgatcggcctcggcatgggggcgtcgcagaacgtgtgcaccatccggccgctggtggcggcgatgtgcttccaccagatgttcgaggggatgggcctcggcggctgcatcctgcaggcggagtacggccgccggatgaggtcggtgctcgtcttcttcttctccaccacgacgccgttcggcatcgccctcggcctcgccctgaccagggtgtacagggacaacagcccgacggcgctcatcgtcgtcggcctcctcaacgccgcctccgcggggctgctccactacatggcgctggtggagctcctcgccgccgacttcatggggcccaagctgcagggcaacgtccgcctccagctcgccgccttcctcgccgtcctcctcggcgccggcggcatgtccgtcatggccaagtgggcgtgagctgacgatgcatcacactctgcggcatcatgcaattcgctgcattgttagattgagcttggtcagactcgatcatcagctgcagacatgttgtacagtgactgtgacttctccatgttgtactgtaattcaggttttcagtgttgtagcgtggttgttcaggttttgttcttcgtgactgatgatgtacttcaatacgagcatctacatattttcatgattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0667500, RefSeq:Os03g0667500