Os03g0672400

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Revision as of 12:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0672400| Description = Conserved hypothetical protein| Version = NM_001057409.1 GI:115454546 GeneID:4333695| Length = 3042 bp| Definition ...")
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Gene Name

Os03g0672400

Description

Conserved hypothetical protein

Version

NM_001057409.1 GI:115454546 GeneID:4333695

Length

3042 bp

Definition

Oryza sativa Japonica Group Os03g0672400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27291742..27294783

Sequence Coding Region

27292057..27292140,27292241..27294369,27294509..27294611

Expression

GEO Profiles:Os03g0672400

Genome Context

<gbrowseImage1> name=NC_008396:27291742..27294783 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27291742..27294783 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcggcgacggcgaggtctccgtcccccggccccggcgcgaggccgggctgcgccgttaggaggagcgccgactccagccccgccgcctccccctgcgatttggcggcgctgaggagctccgtggtgtgcaggaacgcgtcgccgcgggcgtcgtggtgcgcggagaaggagaacagcgggcagcgcgacgcggcggcgagggcggcggcggcgcccaagcccgctcgccccgcggccggcgccgcgaagaacttcatggcgccgaccatctccgcggcgtccaaggcctcgccaaggaagaaggtgctcggggagcgcaacgagcagcagcagctctaccccgtggcctcgtcccccgtcaagcccatggcgtccgaggcgggcgccccgcgacgcctccggctctcgttcgatggggcgcccaatactgccccacccgccgcatccacgccggtcaccgcggcggccggctccaggcactcgttcggcggggaggaggagcggagggtggagaatcccccgtgcaagaaccaccaccacgccacggccttcgacgacgctgcttccgcggaggcggaccagggtgcggctccgtacgatcccaggacgaactacctgtcgccgaggcctcggtttctgcactacaagcccaacccccgcatcgatctgtaccggcaaggcagcagcggtggcgtgaggcggctcgaggacgggttcgcctccgagagcagcgaggaaaccgtcaccaccaccaccaccaccagcagcgaggaggaggtggttcttgtagacgaagaacaacaagcgcatctgtcgtctgagctcggagatggcgccgctgttcccgcggctgatgcttgtgccctgccgctggagcctgcgtcgggttcaccgcgggctcgcgtgctgacgccagagccagcgacgcgttccccgcgcgctcgtgtccagacaccggagccggagcctacggcgagctccgagcgagctcgtcgtcccaggaagaggtcttccctgaggttcctggttgctccccttgcgctggtcgtgttcatggctgctgctctcatctgcgtgccgccgccgccggtggattctccggtcatgccgctaaccgccctgtcgaaggtgtcggactttctgtcagttcaagaattgcatcctgtggagttggctgcttggctgaagcaatggtcaagcagttcgttgaatctggtcacatcctactgggaatcccttgtttgggcgcaagagcaagagttctttggtccgcacttcgcagccaatttgagtgctgcaactgcaagtgcgcacgagggtgttgatctctactgcaactttgttgaaacaaggccagttctaatggaagatatcggtgccagtgcctttgagcaggattccaagatccaggaggctgtttcagcaagtgattctgagttgatttcagagatcagtgatgtggagcaagaagatatcactgataagggagatgtgatcgatgatgggttcttagcagaggagcttaatgttgagatgccggaagaagacgctgagatgtcacaagaagtttcaggtagcaatggtgaagagatggcatccttcagtcaggatctggagccctcccaacctgcaggagaagctgagccactagagaacattgaaactagcacttcttccttgaagcaggatgttcagactgatgattctgagggtgatcgtgctgccgacggagaggagagcccagaggcggatcatggaatgaagtcagaattggggatgtggccaagctacctggacaaaatctcaaagcctgctgctgctggcgcagctctggctgccgtcattgttccagctgcactggccttcctcctcatgagcaagaagcaagatcaggctgtcgcaaatgctgccgctgaggcaccagctgatcaagctgaaccggttgtcgagaagaccctatctggttcggggagcagcgagggtcatcttcgtgtgaagggttcacagcttcagactcctcctgtggcagatgaaaccgagagattcggcggcggctccggcgcttcgatgtatagcagcagcttgtcttctggctatggcaggaggaagagtgccaaggaggacgagagcctgagccttgatccagtgtccaggagggattctgccgcgcaacccacatcgtcctatggtagtttcaccacctacgagaagatccctgccaagaagagaaacaaggatgatgaggcggtgaccaccccagtccggcgttccagcaggttgaggaatcaggttaaatcaccggaggcgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAATARSPSPGPGARPGCAVRRSADSSPAASPCDLAALRSSVV CRNASPRASWCAEKENSGQRDAAARAAAAPKPARPAAGAAKNFMAPTISAASKASPRK KVLGERNEQQQLYPVASSPVKPMASEAGAPRRLRLSFDGAPNTAPPAASTPVTAAAGS RHSFGGEEERRVENPPCKNHHHATAFDDAASAEADQGAAPYDPRTNYLSPRPRFLHYK PNPRIDLYRQGSSGGVRRLEDGFASESSEETVTTTTTTSSEEEVVLVDEEQQAHLSSE LGDGAAVPAADACALPLEPASGSPRARVLTPEPATRSPRARVQTPEPEPTASSERARR PRKRSSLRFLVAPLALVVFMAAALICVPPPPVDSPVMPLTALSKVSDFLSVQELHPVE LAAWLKQWSSSSLNLVTSYWESLVWAQEQEFFGPHFAANLSAATASAHEGVDLYCNFV ETRPVLMEDIGASAFEQDSKIQEAVSASDSELISEISDVEQEDITDKGDVIDDGFLAE ELNVEMPEEDAEMSQEVSGSNGEEMASFSQDLEPSQPAGEAEPLENIETSTSSLKQDV QTDDSEGDRAADGEESPEADHGMKSELGMWPSYLDKISKPAAAGAALAAVIVPAALAF LLMSKKQDQAVANAAAEAPADQAEPVVEKTLSGSGSSEGHLRVKGSQLQTPPVADETE RFGGGSGASMYSSSLSSGYGRRKSAKEDESLSLDPVSRRDSAAQPTSSYGSFTTYEKI PAKKRNKDDEAVTTPVRRSSRLRNQVKSPEA</aaseq>

Gene Sequence

<dnaseqindica>2644..2727#415..2543#173..275#atctctccgcccttccccccacttgtcccctagctccgccgcgataaagtcttgtagccgttggagatcaaaatcaccaagcaatcccatcccccgcggcgccccttcccccccaattctccgcctcgaattcaccctctctctctctctccccccgaatccacagatcgagatggctgcggcgacggcgaggtctccgtcccccggccccggcgcgaggccgggctgcgccgttaggaggagcgccgactccagccccgccgcctccccctgcggtaacgtctcgttttgatttgtttccggtttcgttttcgaacaagctttccgtttctgcggcgagcggatctgatctgatggtttcgtggtgattttgatcgagtcgtgtttttttttgtttttggttggatgcggcagatttggcggcgctgaggagctccgtggtgtgcaggaacgcgtcgccgcgggcgtcgtggtgcgcggagaaggagaacagcgggcagcgcgacgcggcggcgagggcggcggcggcgcccaagcccgctcgccccgcggccggcgccgcgaagaacttcatggcgccgaccatctccgcggcgtccaaggcctcgccaaggaagaaggtgctcggggagcgcaacgagcagcagcagctctaccccgtggcctcgtcccccgtcaagcccatggcgtccgaggcgggcgccccgcgacgcctccggctctcgttcgatggggcgcccaatactgccccacccgccgcatccacgccggtcaccgcggcggccggctccaggcactcgttcggcggggaggaggagcggagggtggagaatcccccgtgcaagaaccaccaccacgccacggccttcgacgacgctgcttccgcggaggcggaccagggtgcggctccgtacgatcccaggacgaactacctgtcgccgaggcctcggtttctgcactacaagcccaacccccgcatcgatctgtaccggcaaggcagcagcggtggcgtgaggcggctcgaggacgggttcgcctccgagagcagcgaggaaaccgtcaccaccaccaccaccaccagcagcgaggaggaggtggttcttgtagacgaagaacaacaagcgcatctgtcgtctgagctcggagatggcgccgctgttcccgcggctgatgcttgtgccctgccgctggagcctgcgtcgggttcaccgcgggctcgcgtgctgacgccagagccagcgacgcgttccccgcgcgctcgtgtccagacaccggagccggagcctacggcgagctccgagcgagctcgtcgtcccaggaagaggtcttccctgaggttcctggttgctccccttgcgctggtcgtgttcatggctgctgctctcatctgcgtgccgccgccgccggtggattctccggtcatgccgctaaccgccctgtcgaaggtgtcggactttctgtcagttcaagaattgcatcctgtggagttggctgcttggctgaagcaatggtcaagcagttcgttgaatctggtcacatcctactgggaatcccttgtttgggcgcaagagcaagagttctttggtccgcacttcgcagccaatttgagtgctgcaactgcaagtgcgcacgagggtgttgatctctactgcaactttgttgaaacaaggccagttctaatggaagatatcggtgccagtgcctttgagcaggattccaagatccaggaggctgtttcagcaagtgattctgagttgatttcagagatcagtgatgtggagcaagaagatatcactgataagggagatgtgatcgatgatgggttcttagcagaggagcttaatgttgagatgccggaagaagacgctgagatgtcacaagaagtttcaggtagcaatggtgaagagatggcatccttcagtcaggatctggagccctcccaacctgcaggagaagctgagccactagagaacattgaaactagcacttcttccttgaagcaggatgttcagactgatgattctgagggtgatcgtgctgccgacggagaggagagcccagaggcggatcatggaatgaagtcagaattggggatgtggccaagctacctggacaaaatctcaaagcctgctgctgctggcgcagctctggctgccgtcattgttccagctgcactggccttcctcctcatgagcaagaagcaagatcaggctgtcgcaaatgctgccgctgaggcaccagctgatcaagctgaaccggttgtcgagaagaccctatctggttcggggagcagcgagggtcatcttcgtgtgaagggttcacagcttcagactcctcctgtggcagatgaaaccgagagattcggcggcggctccggcgcttcgatgtatagcagcagcttgtcttctggctatggcaggaggaagagtgccaaggaggacgagagcctgagccttgatccagtgtccaggagggattctgccgcgcaacccacatcgtcctatggtagtttcaccacctacgagaagatccctgccaagaaggtatacaattaagcggttgctgtttatatcctgaattcatcctttgaaagtttgtttgtgctaggttgcatgcttaattaatttaactttgtttgtgcagagaaacaaggatgatgaggcggtgaccaccccagtccggcgttccagcaggttgaggaatcaggttaaatcaccggaggcgtaaagatgggcagccccagtgctaactacgatctgtaggggacctaactatcagcttgattttagcacttgctgctttagcttaactgctcctcagctttcattgacattgctttagcacttgaattcgactgatgtatgatgataaataacagctctctgctgttcttttcatcgaaaaatggattacgatttctgttttttccccccttctttttagttgtgtctgttgagatgactgctttcgtgcagctttgttatgtttgctacctgaatatgaatgtattaatccaggacatcgctttgttaccattctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0672400, RefSeq:Os03g0672400