Os03g0678400

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Revision as of 12:52, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0678400| Description = Zinc finger, RING-type domain containing protein| Version = NM_001057427.1 GI:115454582 GeneID:4333714| Length = 190...")
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Gene Name

Os03g0678400

Description

Zinc finger, RING-type domain containing protein

Version

NM_001057427.1 GI:115454582 GeneID:4333714

Length

1905 bp

Definition

Oryza sativa Japonica Group Os03g0678400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:27623464..27625368

Sequence Coding Region

27624345..27625046

Expression

GEO Profiles:Os03g0678400

Genome Context

<gbrowseImage1> name=NC_008396:27623464..27625368 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:27623464..27625368 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccaatgttggggaatctacaagcagcggcaccaatggcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaatagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctgacattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaacaacaattttgcccatgccaatcctaatgctaatgccaatccatggttcatgggcactggagtaccattggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattccctatgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggtttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgcccacggtgtccctcgacaaggaccactggagcaaccgcagcaggcagacatctacctgaaggccctgctaatcatggttggatttcttgtggttgcaagccttcttgcattttaa</cdnaseq>

Protein Sequence

<aaseq>MAANVGESTSSGTNGDAAGGSFECNICFELPQEPIVTLCGHLFC WPCIYRWLHIHAHSPECPVCKAVVEEDKLVPLYGRGKDRVDPRSKNIPEADIPNRPTG QRPATAPQADPNNNFAHANPNANANPWFMGTGVPLANARWGNYAFSAAFGGLFPMLSF QVHGFPDANPYAQPAGFHYGYGHGHGFHGGHMGHAAHGVPRQGPLEQPQQADIYLKAL LIMVGFLVVASLLAF</aaseq>

Gene Sequence

<dnaseqindica>882..1583#aggtcatcgtcgtcgcctcgcctcgcctcgccttcccccgcgtggcctcgccgtcggatcgagccacgccgccgccgccgccgcgtcgcggatccccacgctcgccgagaggaggaggaggtgatgccgcttcccgcttgcccccaccctctcctctcgtctcgcggttgcttgggtgcttgtatgctgggtttgtgcgattcggatttgggttcggggccggtggtcgattcggagggggcactggccgattcaggcgtagatttggtttgtttgtttatggcgatctgttgtttgctagttgttcatacgcgggttggttttcctagagaattgggattttttttaattgttctgcgattacggtagaaatagatcgggcttatggataatcccgtcttcttctagcgtgtgattttatcctccaacgtgggagatattcctagatgttttatttccttgtgttgtttatttatgcttagattgttgattccatccttgtggatcgtcagcatcttattctagatgatcctatataattgtgtgaaacaaaattgaggttgttgggagggtttctgatcatcagctgtcctctttaccggcacgaatttggggaatctttcttggttgtgttcttgttggcttataccttttttatgttttgctcaaactcatgagatttttatcgtttaatgctggatccttatgtatgaccacatgctagtagctggcggagcaacttcgtaattgttgctagtagccattatattacatagtactcctaatatattctatcagttttgcatagctatttctagcattgttggtgattgtagtttcattggcaattgcagcttcttgcactttgaagaaacagcaagatggcagccaatgttggggaatctacaagcagcggcaccaatggcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaatagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatccacgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttcccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctgacattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaacaacaattttgcccatgccaatcctaatgctaatgccaatccatggttcatgggcactggagtaccattggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattccctatgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggtttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgcccacggtgtccctcgacaaggaccactggagcaaccgcagcaggcagacatctacctgaaggccctgctaatcatggttggatttcttgtggttgcaagccttcttgcattttaagattgttaacagattcacctggtgatagaagatggtaaaagaattgccagcatatccctgtggcgttgtggtgcgtgcagtttcttcctgccaaatgtggcataagttattttgcgtatttacatgaagtgttcatagaatatttgcatgtagatgtaggataagcatctggctttttatagcctcatatgtagtactataattaggaggagccattttattttcttttctttttttagttttgactgttttgatggatatgatgtacaattattgggatgttgtctccatgtgttgtatacatgtaagaatagttcttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0678400, RefSeq:Os03g0678400