Os03g0684500

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0684500| Description = Conserved hypothetical protein| Version = NM_001057455.2 GI:297601484 GeneID:4333742| Length = 3765 bp| Definition ...")
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Gene Name

Os03g0684500

Description

Conserved hypothetical protein

Version

NM_001057455.2 GI:297601484 GeneID:4333742

Length

3765 bp

Definition

Oryza sativa Japonica Group Os03g0684500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28057833..28061597

Sequence Coding Region

28057833..28058087,28058210..28058332,28058602..28058769,28058859..28060268,28061553..28061597

Expression

GEO Profiles:Os03g0684500

Genome Context

<gbrowseImage1> name=NC_008396:28057833..28061597 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28057833..28061597 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtccccgcggccggcggcgacggcggcggcgcaccgccgggggctgatccagcgcccgccctccgcgcaggcctacctctccgccgcggcggcgctcctcgtcctcgccgccgtcgccttctcccgcgccggccaccgcttcccgcacccgcccgccacccgccgctgccgccccgacgccgagggctcctggtccgccggcgtcttcctcggcgactccccgttctccctcgagcccatcgaacactgggggatctcgaaggccgacggcgcggcgtggccggtggcgaacccggtggtgacgtgcgccgaagtggaggacgccgggttccccagcagcttcgtcgccaagcccttcctcttcctccagggggatgccatctacatgttttttgagacaaagaatcccattacgtcgcaaggcgacattgctgctgctgtgagcgaggacgccggagtgacatggcagcagctgggagtagtgttagatgaggaatggcatctttcgtacccatatgtgtttacctacaaaaacaaggtctatatgatgcctgaaagcagcaagaatggagatattcgtttgtatcgtgcattagattttccgctcaagtgggaattggaaaaggtccttttggagaagccattggtagattcggttatcataaatttccagggttcctattggctccttggaacagatttaagttcttatggtgcaaaacgaaatagagagatcagtatttggtacagtaattctccacttagtccttggattccacacaagcagaatctgattcataacacaggtaaaatgttaagcactagaaatgggggcaggccattcatttacaatggcaatctttatcgtgttggtaaaggccaagggggtggatctggccatggtatccaagtgttcaaagttgaaatcctgaagtcaaatgaatacaaagaagttgaagtcccatttgtgatcaacaagcaactcaagggccggaatgcatggaatggggcacgctcacatcaccttgatgtccagcagcttccatcaggtaaaccttggattggtgtaatggatggtgacagagtaccttcaggtgactcagttcaccgtctgaccataggttacatgatttatggagttgttcttatactagttcttgtcactggtgggcttattggtacaattaactgttccttaccactcagatggtctctcccgcatactgagaaaaggagtgggctcttcaatgtagagcagaggttctttctataccataagctaagctctctgatctccaatttgaacaaactgggatctcttatttgtggaaggattaactacagaacctgtaaagggcgagtttatgtagttgtagtaatgttaattttagtggttctaacttgtgttggaactcactacatctatgggggcaacggtgcagaagaaccgtatccaatcaagggcaagtactcacagttcacattgttgactatgacctacgatgcccggctttggaatctgaagatgtttgtggagcattattccaattgtgcatcggtgagggatattgtagtggtctggaacaaagggcagcccccagctcaaggtgaattgaagtcagtcgttcctgttaggatcagagttgaggataggaactctctgaacaacagattcaacatagacagtgaaattaagacaaaagctgttatggagcttgatgatgatattatgatgacatgcgatgacttagagcgtgggttcaaggtgtggagggagcaccctgacaggatcattgggtactatccacgcctttctgaaggcagcccactggaataccgcaatgagaggtatgctcggcaacaaggaggttataacatggtactcacaggcgcagcatttatggaccatggtttggccttcaagaaatattggagcaaggaagctgaggtaaatcaccacctcttgctgaaacaagtacagtatgagggttaa</cdnaseq>

Protein Sequence

<aaseq>MASSPRPAATAAAHRRGLIQRPPSAQAYLSAAAALLVLAAVAFS RAGHRFPHPPATRRCRPDAEGSWSAGVFLGDSPFSLEPIEHWGISKADGAAWPVANPV VTCAEVEDAGFPSSFVAKPFLFLQGDAIYMFFETKNPITSQGDIAAAVSEDAGVTWQQ LGVVLDEEWHLSYPYVFTYKNKVYMMPESSKNGDIRLYRALDFPLKWELEKVLLEKPL VDSVIINFQGSYWLLGTDLSSYGAKRNREISIWYSNSPLSPWIPHKQNLIHNTGKMLS TRNGGRPFIYNGNLYRVGKGQGGGSGHGIQVFKVEILKSNEYKEVEVPFVINKQLKGR NAWNGARSHHLDVQQLPSGKPWIGVMDGDRVPSGDSVHRLTIGYMIYGVVLILVLVTG GLIGTINCSLPLRWSLPHTEKRSGLFNVEQRFFLYHKLSSLISNLNKLGSLICGRINY RTCKGRVYVVVVMLILVVLTCVGTHYIYGGNGAEEPYPIKGKYSQFTLLTMTYDARLW NLKMFVEHYSNCASVRDIVVVWNKGQPPAQGELKSVVPVRIRVEDRNSLNNRFNIDSE IKTKAVMELDDDIMMTCDDLERGFKVWREHPDRIIGYYPRLSEGSPLEYRNERYARQQ GGYNMVLTGAAFMDHGLAFKKYWSKEAEVNHHLLLKQVQYEG</aaseq>

Gene Sequence

<dnaseqindica>1..255#378..500#770..937#1027..2436#3721..3765#atggcgtcgtccccgcggccggcggcgacggcggcggcgcaccgccgggggctgatccagcgcccgccctccgcgcaggcctacctctccgccgcggcggcgctcctcgtcctcgccgccgtcgccttctcccgcgccggccaccgcttcccgcacccgcccgccacccgccgctgccgccccgacgccgagggctcctggtccgccggcgtcttcctcggcgactccccgttctccctcgagcccatcgaacacgtaactgctccctagaacacgcgagagctcctgcttattaggtttcggtgtgcgatgcgtgggggggggggggtgccgatcgaacgacgccagatgacttggctgatctccgtgccttgcagtgggggatctcgaaggccgacggcgcggcgtggccggtggcgaacccggtggtgacgtgcgccgaagtggaggacgccgggttccccagcagcttcgtcgccaagcccttcctcttcctccaggttcttcgaaccagcttttcactgtgttcccatctcaattttgaagtatcccttcgcattggcaatctcggcaggaatgtcacgattcgattacttcagtgggcattaaatcattcaaatctctaactcacctgtctggagtatctgatatctgaggatgtaaatttattggttttcatgtcacttttatgtgtatttactgcgtcctcgctcacgatcatggtggtctgtatccagccctgatggatgtgcaactgaattgttttcagggggatgccatctacatgttttttgagacaaagaatcccattacgtcgcaaggcgacattgctgctgctgtgagcgaggacgccggagtgacatggcagcagctgggagtagtgttagatgaggaatggcatctttcgtacccatatgtgtttacctacaaaaacaaggtgaaatatttcactcacaggttggagaaaactgctattgcaatcattctcacatagtcacatatgcttttacttgactaactgcacaggtctatatgatgcctgaaagcagcaagaatggagatattcgtttgtatcgtgcattagattttccgctcaagtgggaattggaaaaggtccttttggagaagccattggtagattcggttatcataaatttccagggttcctattggctccttggaacagatttaagttcttatggtgcaaaacgaaatagagagatcagtatttggtacagtaattctccacttagtccttggattccacacaagcagaatctgattcataacacaggtaaaatgttaagcactagaaatgggggcaggccattcatttacaatggcaatctttatcgtgttggtaaaggccaagggggtggatctggccatggtatccaagtgttcaaagttgaaatcctgaagtcaaatgaatacaaagaagttgaagtcccatttgtgatcaacaagcaactcaagggccggaatgcatggaatggggcacgctcacatcaccttgatgtccagcagcttccatcaggtaaaccttggattggtgtaatggatggtgacagagtaccttcaggtgactcagttcaccgtctgaccataggttacatgatttatggagttgttcttatactagttcttgtcactggtgggcttattggtacaattaactgttccttaccactcagatggtctctcccgcatactgagaaaaggagtgggctcttcaatgtagagcagaggttctttctataccataagctaagctctctgatctccaatttgaacaaactgggatctcttatttgtggaaggattaactacagaacctgtaaagggcgagtttatgtagttgtagtaatgttaattttagtggttctaacttgtgttggaactcactacatctatgggggcaacggtgcagaagaaccgtatccaatcaagggcaagtactcacagttcacattgttgactatgacctacgatgcccggctttggaatctgaagatgtttgtggagcattattccaattgtgcatcggtgagggatattgtagtggtctggaacaaagggcagcccccagctcaaggtgaattgaagtcagtcgttcctgttaggatcagagttgaggataggaactctctgaacaacagattcaacatagacagtgaaattaagacaaaagctgttatggagcttgatgatgatattatgatgacatgcgatgacttagagcgtgggttcaaggtgtggagggagcaccctgacaggatcattgggtactatccacgcctttctgaaggcagcccactggaataccgcaatgagaggtatgctcggcaacaaggaggttataacatggtactcacaggcgcagcatttatggaccatggtttggccttcaagaaatattggagcaaggaagctgaggtaggaagacagattgtagacagtttcttcaattgtgaggatatccttctaaatttcttgtttgcaaatgcaagcttgacaagcacagtggagtatgtaaagccagcttgggcaattgatatgtccaagttctcaggagttgccatcagccgaaacacacaagcacactatcatgttaggagcaaatgcctggctaaattttcagaaatatatggaaatttaactgctaagaggttctttaacagccgaggtgatggctgggatgtatagtgacacatattagtggatagctttattcctgagactcaaatagactgattagccaagtatataaggtggggaagcagggggaggactagtgcaggaggaattatgtaattaagttattcagcaatgtatcctgttgtggttctactccctccgttccataatataagggattttgagtttttgcttgaactgtttgaccactcgtcttattcaaaaaaatttggaattattatttatttttttgtgacttactttactatccaaagtactttaagcacaacttttcgttttttatatttgcacaaatttttgaataagactatccaaagtactttaagcacaactttttcgttttttatatttgcacaaatttttgaataagacgagtggtcaaacaatacaaacaaaaactcaaaatcccttatattatgggacggagggagtattagtttagcgtgcccctgctgtaggttttccatagatggtttttggtgttcctgcgcttccacttatatttcataattttaattccttttgaattctagttgcctcacatgtgcaatctgtaattattgcaactgtacatgcaattgcaatcgtgccccaggagccaggataaatagttcaatctccctcagattaacagaggtgaacttccttcctcccttttttctttttgtgcaaaattgtatattacatgaagaaagcaattatgaatcacaaaagaaggaattttatttgtacacttatcagatttcattaaatgagatattggtatgtacttcatatttgcatgttctgcactgtgatcacaaattcacaatcaggtatcgatcaatctgctttttctcctcttcctgtttagtaaataagaccaaggaaactaaatctgcatttcctccatttctccccaatgcagttctagcaaattgtggtacaatcttgaattttagtcatgtcattgctacgagaagtaatgcaccgcttgaatcaaaacttgaaattcttcttcaggtaaatcaccacctcttgctgaaacaagtacagtatgagggttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0684500, RefSeq:Os03g0684500