Os03g0684700

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0684700| Description = HPP family protein| Version = NM_001057456.1 GI:115454640 GeneID:4333744| Length = 2263 bp| Definition = Oryza sati...")
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Gene Name

Os03g0684700

Description

HPP family protein

Version

NM_001057456.1 GI:115454640 GeneID:4333744

Length

2263 bp

Definition

Oryza sativa Japonica Group Os03g0684700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28061156..28063418

Sequence Coding Region

28061529..28061570,28061663..28061769,28061912..28062059,28062661..28062794,28063074..28063395

Expression

GEO Profiles:Os03g0684700

Genome Context

<gbrowseImage1> name=NC_008396:28061156..28063418 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28061156..28063418 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcattgcagcaacgaccggggatgctcggcattggctgcagcaacgtcttggcacgagcaagggtgcagcaatgtctagcagcggcgtcccactccaatatgccatgtctacccgtcctcctgcatgtcaatggcagcaagaagcagggtagcagcttcctttcttctcagaggatcggcttaagtaggaggaggaggaggagggacctgagcggcgtcgttgtcgcggaagtgagcgccgccgccggtgtcacgccggcgtcgtcgtcgtcgtcgcctggcggcatcagcgtcagcgatgttctttggccctccgccggtgcattcctagcaatggccgtgctgggaaggatggatcagatgatggcgtacaagggagtatcattgacaattgcccctctcggagcagtctgcgatgtgcttttcaccgctccaggctcacctgctgccaagaaatacaacatgtttgttgcccagattggttgtgcggcatttggtgtgttagccctttccttatttgggcctggatggttggcaagaggtgctgctctttctgcatccatagcattcatgacaattacaggcgcctcacaccctccagctgcaagcttgcctctcttgtttattgatggtccaaagtttcaccacttgcaactctggtatgccctttttcctggagctgcaggctgcataattctttgcttgattcaagaggtggtgatttacctgaagaagaatttcaagttttga</cdnaseq>

Protein Sequence

<aaseq>MALQQRPGMLGIGCSNVLARARVQQCLAAASHSNMPCLPVLLHV NGSKKQGSSFLSSQRIGLSRRRRRRDLSGVVVAEVSAAAGVTPASSSSSPGGISVSDV LWPSAGAFLAMAVLGRMDQMMAYKGVSLTIAPLGAVCDVLFTAPGSPAAKKYNMFVAQ IGCAAFGVLALSLFGPGWLARGAALSASIAFMTITGASHPPAASLPLLFIDGPKFHHL QLWYALFPGAAGCIILCLIQEVVIYLKKNFKF</aaseq>

Gene Sequence

<dnaseqindica>1849..1890#1650..1756#1360..1507#625..758#24..345#ggggagagagagagagagagagaatggcattgcagcaacgaccggggatgctcggcattggctgcagcaacgtcttggcacgagcaagggtgcagcaatgtctagcagcggcgtcccactccaatatgccatgtctacccgtcctcctgcatgtcaatggcagcaagaagcagggtagcagcttcctttcttctcagaggatcggcttaagtaggaggaggaggaggagggacctgagcggcgtcgttgtcgcggaagtgagcgccgccgccggtgtcacgccggcgtcgtcgtcgtcgtcgcctggcggcatcagcgtcagcgatgttctttggccctccgccggtgagtctgaaacttgaaacttgtcttcttcgtcggccttcgttggctgggtctctgaatctccgtgctttttcgccaagtgaattcagcgagggcttggtttcctctctgtgatatatttttgttgaatggttgtgcagagaaaaaaaaagactatttcttgcatatagtagtggcaaaaccacaaaagccgtcgagagtttgatggttttgccaataaattttatagaaaagaaggctcacctgacatatttttcctcaaataatgataacgtgcaggtgcattcctagcaatggccgtgctgggaaggatggatcagatgatggcgtacaagggagtatcattgacaattgcccctctcggagcagtctgcgatgtgcttttcaccgctccaggctcacctgctgccaaggtatgaatagcttaacagttaaatattttagttacaacatcgacagtgactcttcaatactacaagaaaaattttctatgcataatgctaccttttattttttttatgggaaacaaatgttctattatccttttctaagatttttgggcaagtcggaaaccctaagatgcacagatgaattaatcgctgccacttactgtactgactgaatctaatggacacccagattatgttgatttgcaaactagtttctcaaattagaaaaaagatctactaaaaaatctgcagcatgtagtagcaatataatgcttctaaatttcagggtgtccatgttgtcgtcgactgaaaaactatggctcatagaactcagttgaaggcttggaaccatacctctgttttcctttctgtagtcatgactgaaccacaaaagtagttatgtacgatttttcggtgtagtaaaaatcattaggtgtttccatttgggttaattttttgagattggatgaacacattccagttggagtcctacaacaaatctaaaaacattcttagatcatacgtgaaatcaatactaatactagcaggtgacaaaatcttgcagaaatacaacatgtttgttgcccagattggttgtgcggcatttggtgtgttagccctttccttatttgggcctggatggttggcaagaggtgctgctctttctgcatccatagcattcatgacaattacaggcgcctcacaccctccaggtatataatctttctttcaacagggatgtggtgctttagatgtgctcagcaggatttaaaaaaatatttctgattgacatctgtttttgtactctacttaaatgcatcatagcaaagctcaccatttccatgatgattgcagctgcaagcttgcctctcttgtttattgatggtccaaagtttcaccacttgcaactctggtatgccctttttcctggagctgcaggctgcataattctttgcttgattgtaagtatatttcccctcccagcttccttaaagtaaatgagattatcaaaaagagaaatatagcattaaccctcatactgtacttgtttcagcaagaggtggtgatttacctgaagaagaatttcaagttttgattcaagcggtgcattacttctcgtagcaatgacatgactaaaattcaagattgtaccacaatttgctagaactgcattggggagaaatggaggaaatgcagatttagtttccttggtcttatttactaaacaggaagaggagaaaaagcagattgatcgatacctgattgtgaatttgtgatcacagtgcagaacatgcaaatatgaagtacataccaatatctcatttaatgaaatctgataagtgtacaaataaaattccttcttttgtgattcataattgctttcttcatgtaatatacaattttgcacaaaaagaaaaaagggaggaaggaagttcacctctgttaatctgagggagattgaactattt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0684700, RefSeq:Os03g0684700