Os03g0685100

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0685100| Description = contains InterPro domain(s): IPR001537| Version = NM_001057459.1 GI:115454646 GeneID:4333747| Length = 1897 bp| Def...")
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Gene Name

Os03g0685100

Description

contains InterPro domain(s): IPR001537

Version

NM_001057459.1 GI:115454646 GeneID:4333747

Length

1897 bp

Definition

Oryza sativa Japonica Group Os03g0685100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28074706..28076602

Sequence Coding Region

28074734..28075014,28075113..28075392,28075570..28075620,28076145..28076555

Expression

GEO Profiles:Os03g0685100

Genome Context

<gbrowseImage1> name=NC_008396:28074706..28076602 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28074706..28076602 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctactggcgcgcgctccgccgccgccggcgatgccctcggcggtcagctcgccgccgcaacgggagagcatactccgcccatactgcgttccctggacccgcggctccgttgcgacggccgccgtggcgaaggctgctcctttccggggcgagcaaaaccacaagcaggtagcgagcgtggcgaaccccctggtgaagcactgcgttaggctcaggctctcctccgcgtaccgccgctcctgccgccgcattctcctcgtcggactcatccccatcctggagatgtgtagcttcgaattctccaccatcgaaaccttgcttctcttggacggcatagagctaccggaggaattgtacgggttctctggcaatgtcgtgtatgtcagcgccgctgtgatgaagaaagtttctgggatgcaatcagttgattcaactgaggcaatcgctatcattcacatgcctaagtatttccgcgaccttgacagcgaccagggtggagctgttcttgatgagtggctcggctctgcaaagaggattttggttctggatgggattcaggaccctggtaaccttggaacattgataagatccgcttgtgctttcagatgggatggggtatttcttcttccagcttgctgtgatcctttcaatgaaaaagctcttcgtgcagctcgtggagcctcattgcagcttccagttgtttctggtaactggtctgatctgcatgctttgatggctaaatctgatatgaagatgctggcaggtcatccagaaagcagcagtaatggatctgaaagaacacatgttctatctaaagaactagcggattcactgatgagtgaatcagtgtgcttagtgttaggaagtgagggcaatggcctttcggcagatacccttcaagcctgtgagcttgtaaacattcctatgcaaggtacatttgaatctcttaatgtttcagttgcaggtggtatcttcttatttatgttacaaactaaacagcaaaaaatggcagaacgttaa</cdnaseq>

Protein Sequence

<aaseq>MLLARAPPPPAMPSAVSSPPQRESILRPYCVPWTRGSVATAAVA KAAPFRGEQNHKQVASVANPLVKHCVRLRLSSAYRRSCRRILLVGLIPILEMCSFEFS TIETLLLLDGIELPEELYGFSGNVVYVSAAVMKKVSGMQSVDSTEAIAIIHMPKYFRD LDSDQGGAVLDEWLGSAKRILVLDGIQDPGNLGTLIRSACAFRWDGVFLLPACCDPFN EKALRAARGASLQLPVVSGNWSDLHALMAKSDMKMLAGHPESSSNGSERTHVLSKELA DSLMSESVCLVLGSEGNGLSADTLQACELVNIPMQGTFESLNVSVAGGIFLFMLQTKQ QKMAER</aaseq>

Gene Sequence

<dnaseqindica>29..309#408..687#865..915#1440..1850#gacacgcgcctcgccgccgcccgccgcgatgctactggcgcgcgctccgccgccgccggcgatgccctcggcggtcagctcgccgccgcaacgggagagcatactccgcccatactgcgttccctggacccgcggctccgttgcgacggccgccgtggcgaaggctgctcctttccggggcgagcaaaaccacaagcaggtagcgagcgtggcgaaccccctggtgaagcactgcgttaggctcaggctctcctccgcgtaccgccgctcctgccgccgcattctcctcgtcggactcatccccatcctgtaaacttttctctattctaagctgcgaaattcccttattttgttttattctgagatgaatttttttcctaattctgcactcgtacgccttggtgcagggagatgtgtagcttcgaattctccaccatcgaaaccttgcttctcttggacggcatagagctaccggaggaattgtacgggttctctggcaatgtcgtgtatgtcagcgccgctgtgatgaagaaagtttctgggatgcaatcagttgattcaactgaggcaatcgctatcattcacatgcctaagtatttccgcgaccttgacagcgaccagggtggagctgttcttgatgagtggctcggctctgcaaagaggattttggttctggatgggattcaggtaaaaagaagtgtgcaatattccgttattatccatagtaaatggatgtcattttgtgcataagacggcacataatatgttgtttattgtttattttaagtttgaactagtccatttgattcctcttaagcaagggttctaaatttttactgtgtccataatggttctatcctgcaggaccctggtaaccttggaacattgataagatccgcttgtgctttcagatgggtatgtcatttactactaattgttgaagcgtctctgattgcatttctcaaaacttgatgtttcatggtctcatggatcacaccatcctattgtttcatataaagtagttatcacagcttgttttacttctcaataataaggtagaacttaagtgataaaaaagctaatactactggtagtatgtagaattattaggtttgcacttgtttttacatctaaggatgatagtgtaatgctattaatgacattttgaaagcaaaaggttagtacattctgggttagaaggctagaaaccccatacgtgttctacatttccacaaaaaattatgctcctattatacagcatcagatgaagtttagttagcagttagcacatgccaatatgccatcacacaaaaatatctgcatggtgtgtagcctaccagaaatttatactaactcttcaagtgctttcagtagtgttgttcggttagtctttaccaatttctatgcttctaacagcatttaaaaccaactaccaacaggatggggtatttcttcttccagcttgctgtgatcctttcaatgaaaaagctcttcgtgcagctcgtggagcctcattgcagcttccagttgtttctggtaactggtctgatctgcatgctttgatggctaaatctgatatgaagatgctggcaggtcatccagaaagcagcagtaatggatctgaaagaacacatgttctatctaaagaactagcggattcactgatgagtgaatcagtgtgcttagtgttaggaagtgagggcaatggcctttcggcagatacccttcaagcctgtgagcttgtaaacattcctatgcaaggtacatttgaatctcttaatgtttcagttgcaggtggtatcttcttatttatgttacaaactaaacagcaaaaaatggcagaacgttaactgtttaagtcatccttgattttttaataattttattgttcttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0685100, RefSeq:Os03g0685100