Os03g0685700

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0685700| Description = Protein prenyltransferase domain containing protein| Version = NM_001057463.1 GI:115454654 GeneID:4333751| Length = ...")
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Gene Name

Os03g0685700

Description

Protein prenyltransferase domain containing protein

Version

NM_001057463.1 GI:115454654 GeneID:4333751

Length

6551 bp

Definition

Oryza sativa Japonica Group Os03g0685700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28112058..28118608

Sequence Coding Region

28112178..28112180,28112294..28112364,28114775..28114895,28114977..28115020,28116264..28116475
,28116574..28118543

Expression

GEO Profiles:Os03g0685700

Genome Context

<gbrowseImage1> name=NC_008396:28112058..28118608 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28112058..28118608 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttctccatcgcggccatcaacgagagcgacaccggcgggcagtgggagccgctcgcgcctaccaaggaagctcaggaatcagcactctctcagaagtaccacgaggggctcctcaagttgcaagaaaaaaattatgtaaaagctcgtgaacttctggaggatgtcttaaaggacccactaatatcaaaaattcaggctgataacattgtcagtgatcagcatttgctgcagctaaggtttcttacattgaaaaaccttgcgtctgtttttcttcaacaagggtcagcattttatgataatgctcttcgttgttacctacaagctgtagagcttgatgcaaatgattcagttgtatggaaccatctgggaacactttcctgctctatgggtttgttgagcacatcaagatgggcatttgagcaagggcttctatgtagcccaaataattggaactgcatggagaaactcttggaggtgcttatagctatctgtgatgaagttgcatgcctttctgtagcaaagttaatacttaggagttggccatcacatcatcgggctttacatgtaaagaagaccattgaggatgcagaaccagtaccctttgcacctcgaggtatcgacatacttgaacccaagcatgcaaaactcaaattttgtaacaaaagaaaatctggagatgatgaaacgcatcatgaaacagtgacaaagaagagtaggcagaatgctaaattgcagttgactgaagccaaatggatggcccttttagatggtatcctaagcttcttaagttcaaacaacacaaaatctaatgaagatcacggtgccaatacagagagtcaatgtgatactaagaggagtatcaatgggtttgcttataacatgatggatgtctccttatctacggaaacattgaaaactatggaatctgcaggtgggaatgaacatgatttgtaccatgatggtgaaagtgtgctgtctcatgactgcagaactgcagttaaagagaaggacaccaattcagatagagaacatcctcatgaaaggagaagcacacgtcttgagaggctgcgaagtcgtaaatctggtaaagatgaacatgaatccaatggaaaagatatatcacatgctataactcaatttctagattcatttatcttgaagcgcacaagtattccagaaaagatcgattgttctggaaatggtgatgcttctacccctgaagctctaacatatacacctgatcgtgaggcaagtgatgtgaagcaatttctttccaaaatatcaaaaaattgtggacctcttcatattggctatatgttacttgaggaaatagctcagaccaacataccttttcaagattactttgttaagttcattgaactagacaaaattactagaggctgggctcaagatagatctgcacaatgcagcttatttcttgctgaattatactatgatcaagctctttgttctggaagcccattagcatcctcagagttgtccaattcatcttaccatctttgtaaggtcatccaatcagtagctttggaattgccattcagaacctctgatggagcagcaaagtccaccaatttggatttgaatatggaaagccatatggaagaggtgtgttcaagcgataaaactgagaagaatgcctcaaatatgtccagaaactctgtaaattctgtcaactcggtttccagtaacattctttgtgatgaaacatctgaatgtgattcttcttcaaacactaattgtgttttctggattcgcttcttctggctgagtggttgtctgtccctttcatcagactgcaaagaaaaagcttacaaggagttcaacattgccctgtcacttatgagaagtagcaacgaagccaaaatcaatagagagtttgtccttctacctcacaataagcttgtaaaattgcttacagctgataggattcttcgtgaaattaacttggtcaagcttgaatctttactttggcataatgatgaaaacatcaataaaataactcatacagagttcatggaattgcttcctccacttttgctttccaccaaagatgtctatgttggcagtgcatatggtccaccaagagaaagtgagaaagttatttcactagagttaggtgccttggatgttttaatatcagcatgtgaaaatgctaaaccaatgaacatccaggtataccttgactctcatcgaaggaaaatgcaagttctaactgtggcagctggcatggttggatcggttaccaccaatgaggggaaaaaatcaagtgatatagagtttatggaaacaatgaataggaatcgactggaaagtgttgtagaagcagtcaaagatgtttctcgaaatgctagtaaagcgaaagcctttgttgatcagtgtgataaccctgtaagttga</cdnaseq>

Protein Sequence

<aaseq>MFSIAAINESDTGGQWEPLAPTKEAQESALSQKYHEGLLKLQEK NYVKARELLEDVLKDPLISKIQADNIVSDQHLLQLRFLTLKNLASVFLQQGSAFYDNA LRCYLQAVELDANDSVVWNHLGTLSCSMGLLSTSRWAFEQGLLCSPNNWNCMEKLLEV LIAICDEVACLSVAKLILRSWPSHHRALHVKKTIEDAEPVPFAPRGIDILEPKHAKLK FCNKRKSGDDETHHETVTKKSRQNAKLQLTEAKWMALLDGILSFLSSNNTKSNEDHGA NTESQCDTKRSINGFAYNMMDVSLSTETLKTMESAGGNEHDLYHDGESVLSHDCRTAV KEKDTNSDREHPHERRSTRLERLRSRKSGKDEHESNGKDISHAITQFLDSFILKRTSI PEKIDCSGNGDASTPEALTYTPDREASDVKQFLSKISKNCGPLHIGYMLLEEIAQTNI PFQDYFVKFIELDKITRGWAQDRSAQCSLFLAELYYDQALCSGSPLASSELSNSSYHL CKVIQSVALELPFRTSDGAAKSTNLDLNMESHMEEVCSSDKTEKNASNMSRNSVNSVN SVSSNILCDETSECDSSSNTNCVFWIRFFWLSGCLSLSSDCKEKAYKEFNIALSLMRS SNEAKINREFVLLPHNKLVKLLTADRILREINLVKLESLLWHNDENINKITHTEFMEL LPPLLLSTKDVYVGSAYGPPRESEKVISLELGALDVLISACENAKPMNIQVYLDSHRR KMQVLTVAAGMVGSVTTNEGKKSSDIEFMETMNRNRLESVVEAVKDVSRNASKAKAFV DQCDNPVS</aaseq>

Gene Sequence

<dnaseqindica>121..123#237..307#2718..2838#2920..2963#4207..4418#4517..6486#gtaattattcgcaggaagcatcacttcgccgcaagacggcggcgaccaccgctcctcggctggagggagccctcgtcgccggcgaagcccgcgcggccacctcccctgccggagttggccatggtgagctccacctctctctctgcgtgtggctgcgcgcctcgctccatgttccggtcggcttattccttactcgcttcctctctctcgcgcgcgcgtctccgcggcgctcgcagttctccatcgcggccatcaacgagagcgacaccggcgggcagtgggagccgctcgcgcctaccaaggaagctcaggcaagtctcctccccccttgtcgccccgagcattctctcttcctgcgtatctatctaatgcttcgcctccgtagcttgtgattttgggccccgttagggttttcggttcttcgagcgcaatgtgatggattgattggttttaagtgggtaaacgcagcttaatgttgtggcaagcagactctaggagatgtagaattcgatcaccctgttctttgatgtgatgtgatgtaaggtaccatgtgttctttagcttgtgttttcgacaatttgggagcttgaagtggggtttttactatctatggtttcttccgattctgcgacttgcgaattcaaaataactgttttttgttcctttgatttgatgtttgcttatcccctaataaaaggataatgtaagatttcggttttcattatcggttgtaggtgtaggagggcactcaggttagacctttcaggttaaggggcagtattcttgatgttgagctatacatgctcaattgctcatgatgtagacgaatgcgtgatagcatagtactacattttttttccaaaaaataaaattgttaggaggttaaggtcgttttgaaagctagctgttggtaaagattttggtgtcatctttagttatgctaggaaccgatttaattgaaatacggaataaatatcttctaaactgctttacgagaatcggaagattaacacagacaattattataagtaaataactttgggatggaaatttttaggattactagctaattaccaatcctccttgacatattttgaattaacataagttataaactttatgaaaagttgtatatgtttctcagaaggaaaacacgtatatctatatcatgtgcctagattatctattatctagaaaacatctcaccaactcaatccataggagccttttgatttagatgttctaatgctccttctctattcggaaggagagatatgcccccccccccaacccaaaaaagaaaaaaaaaaccctgaactaaacttggtttggtgcaagtctttttcatttttaattaaatggttaagaaggatatctcagggaaattccaagttattattgttaatagccctttattgaacatgctgccatctgattatatatgtggaactttgtttagttagaggcatgatcataaaaaggtgctccaacggaacaaaagggaatcttccaggggcagatttctactttattttactcttttttaatccttgaataacattggttctattatgtaaacattaatttaggatgattcattgaccactctgattgtcttgatgttgctctgctggtcctggattacaatggaatgcatgtattaatttatagtttgataggtaatatacttgttcatctgcccttttattgatgtgttgatgtgttgggatttgggattggggatggtgttctctgtgctggatttttatggacggatacatgattggtaatttaatgcattatgtatacatatctactccctccttccacaaaagttagacctgttacttttttcaccaagaccaagagaaattaactcatttgcatgtaacaaagatcaaggagtatatgcacgcatgcaaccaatgaacattaagatggctcatcgggttctgattaaacatcaaatttacctctccgtttaagtcttggatgcatagagactataaataggaacaacttatttggattttggaaaaactaaaatatgaaataggtcgaactcttgtggatggagagagttctggctggtacacatttttatttaattttagatttgaagataattatttcggtatctttaaaattagaatatgtgatctgtattgtttcgagaattgttgcgatgcacagtcagtcagtcactgtgctagtacttcctccatatcaatataaggacttttagagttgggcacagttattaaggagaaatgtaaaataaaatggatggttgtgattggttcagatgaggaagtaggtggagaaattaaatgggagatggttgtgattggttgagaggtggaaaggtagctatattttgggacaaattttgaatgctaaatgtgctatgttttgggacggagggagtatatcataatataccagttctgatgtagttttacctgcaccaactagatgtgcgtggctatcatatcatgtctgtccaaggaattgattctgccagtcttgtgcaataggtaggtcactgtaattgatctgagaacacgtttagtagttaattaacagtatttaactgaaggattcttttgtaaatctcttcctgtgctaaggtcattttttttagttttacaacttacaagctctcaattttgttgccgcaatattactgtgttattgaaattacttttcaaaatgcttcaggaatcagcactctctcagaagtaccacgaggggctcctcaagttgcaagaaaaaaattatgtaaaagctcgtgaacttctggaggatgtcttaaaggacccactaatatcaaaaattcaggcaatctctataagaacatttcagatatcagtttgtttagacctgtgctctctataacaccaagttgtttattttaaacaggctgataacattgtcagtgatcagcatttgctgcagctaaggttcttttctccatacctcatttgtaatgttcatgatgtaattccatttttatttgttggttaaaatcattgacatagcgcgaagaattataccaagtggaataaacactcataaaataatgaaatttcttagaactacaacagctcttaatttaagaaagatgcatttgtgtcatggggtaaccacacccccatcatctaattcaccatgttgcaatgattcataaaattccaaaagagaaacaaactcatgtgtagtacacataaagttatacaagcctgcaaaaattcattccagatatcgaggaacaaaaaagagaagcaatcaattggaactattcatcatgtgctagcattacaacttctcttttttggatctcagctctcttttttggatctcaacttgtaggatgaatctgtcattaaatttgtgcagatttataaacattatgtttatattaatttgtgaagcataggaatgtgttggattcaacatatatttgccgtggagatggtcgttccttaggacaccatattttttagaaccatattttttggtgggacaattctctctcatataaggaagcataatttgagtgacgagttgcaatggcactgcttgtatactactccctccgtccctaaatataagggattttggtgggatgtgacacatcctagtacaacgaatctggacaaattactgtccagattcgttgtactaggatgtgtcacatcccaccaaaatcccttatatttagggacggagggagtattataactaaaaagtaagatattgataatatatcacaagaacgtaaatatacattactattacattgcatacagtatgcaatgaggataaaaaaagaacttgggatacaaatgactcagattgaattgcaagcatcaactaaatcaattctatgctgaattgcaacaagcagaacctttcaaccacatcccatcccaatttaccccaatctgattaatcatggttttggtttgatcatgttttgtggatagatctcttcttttaagtagctaatatcatatggatgatataatataatcataggcaactgtttgtgtgtcacgatttcttgaaggttgtgctatactacacatgtgcataattgggtgtgttgactcttcaatcagatataactgactaaatttcaatggctgataggtttgaaatctgcaacattaatttttaacgtgaggcttcttaatttcacaggtttcttacattgaaaaaccttgcgtctgtttttcttcaacaagggtcagcattttatgataatgctcttcgttgttacctacaagctgtagagcttgatgcaaatgattcagttgtatggaaccatctgggaacactttcctgctctatgggtttgttgagcacatcaagatgggcatttgagcaagggcttctatgtagcccaaataattgtatgatgtcttttttcattattcccttctagtttattcccactgccttttagttcatctattgttcctaaaatccatgatttttttctggttttcagggaactgcatggagaaactcttggaggtgcttatagctatctgtgatgaagttgcatgcctttctgtagcaaagttaatacttaggagttggccatcacatcatcgggctttacatgtaaagaagaccattgaggatgcagaaccagtaccctttgcacctcgaggtatcgacatacttgaacccaagcatgcaaaactcaaattttgtaacaaaagaaaatctggagatgatgaaacgcatcatgaaacagtgacaaagaagagtaggcagaatgctaaattgcagttgactgaagccaaatggatggcccttttagatggtatcctaagcttcttaagttcaaacaacacaaaatctaatgaagatcacggtgccaatacagagagtcaatgtgatactaagaggagtatcaatgggtttgcttataacatgatggatgtctccttatctacggaaacattgaaaactatggaatctgcaggtgggaatgaacatgatttgtaccatgatggtgaaagtgtgctgtctcatgactgcagaactgcagttaaagagaaggacaccaattcagatagagaacatcctcatgaaaggagaagcacacgtcttgagaggctgcgaagtcgtaaatctggtaaagatgaacatgaatccaatggaaaagatatatcacatgctataactcaatttctagattcatttatcttgaagcgcacaagtattccagaaaagatcgattgttctggaaatggtgatgcttctacccctgaagctctaacatatacacctgatcgtgaggcaagtgatgtgaagcaatttctttccaaaatatcaaaaaattgtggacctcttcatattggctatatgttacttgaggaaatagctcagaccaacataccttttcaagattactttgttaagttcattgaactagacaaaattactagaggctgggctcaagatagatctgcacaatgcagcttatttcttgctgaattatactatgatcaagctctttgttctggaagcccattagcatcctcagagttgtccaattcatcttaccatctttgtaaggtcatccaatcagtagctttggaattgccattcagaacctctgatggagcagcaaagtccaccaatttggatttgaatatggaaagccatatggaagaggtgtgttcaagcgataaaactgagaagaatgcctcaaatatgtccagaaactctgtaaattctgtcaactcggtttccagtaacattctttgtgatgaaacatctgaatgtgattcttcttcaaacactaattgtgttttctggattcgcttcttctggctgagtggttgtctgtccctttcatcagactgcaaagaaaaagcttacaaggagttcaacattgccctgtcacttatgagaagtagcaacgaagccaaaatcaatagagagtttgtccttctacctcacaataagcttgtaaaattgcttacagctgataggattcttcgtgaaattaacttggtcaagcttgaatctttactttggcataatgatgaaaacatcaataaaataactcatacagagttcatggaattgcttcctccacttttgctttccaccaaagatgtctatgttggcagtgcatatggtccaccaagagaaagtgagaaagttatttcactagagttaggtgccttggatgttttaatatcagcatgtgaaaatgctaaaccaatgaacatccaggtataccttgactctcatcgaaggaaaatgcaagttctaactgtggcagctggcatggttggatcggttaccaccaatgaggggaaaaaatcaagtgatatagagtttatggaaacaatgaataggaatcgactggaaagtgttgtagaagcagtcaaagatgtttctcgaaatgctagtaaagcgaaagcctttgttgatcagtgtgataaccctgtaagttgactgttctattttctgtggattttcttgactgtcattttaattcaagtctttcatacttggaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0685700, RefSeq:Os03g0685700