Os03g0687200

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0687200| Description = Conserved hypothetical protein| Version = NM_001057473.1 GI:115454674 GeneID:4333761| Length = 4746 bp| Definition ...")
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Gene Name

Os03g0687200

Description

Conserved hypothetical protein

Version

NM_001057473.1 GI:115454674 GeneID:4333761

Length

4746 bp

Definition

Oryza sativa Japonica Group Os03g0687200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28192275..28197020

Sequence Coding Region

28194412..28194471,28195084..28195136,28196153..28196729

Expression

GEO Profiles:Os03g0687200

Genome Context

<gbrowseImage1> name=NC_008396:28192275..28197020 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28192275..28197020 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggagcacctcgcgctgcggagctccgtcgggagccacagctccgcgctgccgccgtcctaccaccaccaccgccgcctcccgccgccgcagcagcagcaccccgacccgctcaactccgtctggatccgccgcctccacctcctcccccaccagccgccccctcccccgcccccgcctccgctcccgcagccgcagcaccaccacgacgccgtctccaccgacgagtcccgcacgccgccgccgccgcctcccccgatgggcgcccccggattcggtcccttccgctggagcccgcgcccgctgcgtggcgcgccgctcgccgcgtgggacgccgcctcccccgtccgcagcggcggcggcggcggcggcggaactggaccacctatgctctcgccgttcttccgcctacccgcgccgtcgccgtcgccgccggtgaccgacttcggggagttctcgcctaccatgccacttttcgaggttggcagcagcagcggcagcggcgggttcccggggccgtcgtcgcggatgattcccggcggcagctcatctccttttgcaatgggagttgcagctgctgcttaccctagccatgctgtggacatggttcccataagaactcttcaggtgagttatatcaagttagatcaaaaggaaggtgtgcaagatctatatgtggtgaattga</cdnaseq>

Protein Sequence

<aaseq>MSEHLALRSSVGSHSSALPPSYHHHRRLPPPQQQHPDPLNSVWI RRLHLLPHQPPPPPPPPPLPQPQHHHDAVSTDESRTPPPPPPPMGAPGFGPFRWSPRP LRGAPLAAWDAASPVRSGGGGGGGTGPPMLSPFFRLPAPSPSPPVTDFGEFSPTMPLF EVGSSSGSGGFPGPSSRMIPGGSSSPFAMGVAAAAYPSHAVDMVPIRTLQVSYIKLDQ KEGVQDLYVVN</aaseq>

Gene Sequence

<dnaseqindica>2550..2609#1885..1937#292..868#gggtcgtgtgttcgtgtccacccctatcccctcatcaccctcttctctcggctctcgcttcacttcctccactccccgcgacgccgacgacgacgaccacgacgccggcgacggcgacctcccggcagcttatattcctccccccgcttgcttgcttcctccccacctcgcctccatcctaggtgagcccagccacacgaccagagctgtgcgagggctagcttaagctagccttcgccttcggggtcctcctcgcggtctccggcgatcccgccctccgccgccgccgccatgtcggagcacctcgcgctgcggagctccgtcgggagccacagctccgcgctgccgccgtcctaccaccaccaccgccgcctcccgccgccgcagcagcagcaccccgacccgctcaactccgtctggatccgccgcctccacctcctcccccaccagccgccccctcccccgcccccgcctccgctcccgcagccgcagcaccaccacgacgccgtctccaccgacgagtcccgcacgccgccgccgccgcctcccccgatgggcgcccccggattcggtcccttccgctggagcccgcgcccgctgcgtggcgcgccgctcgccgcgtgggacgccgcctcccccgtccgcagcggcggcggcggcggcggcggaactggaccacctatgctctcgccgttcttccgcctacccgcgccgtcgccgtcgccgccggtgaccgacttcggggagttctcgcctaccatgccacttttcgaggttggcagcagcagcggcagcggcgggttcccggggccgtcgtcgcggatgattcccggcggcagctcatctccttttgcaatgggagttgcaggtatagatttttctttcttcttccttgcacacatcttcttctgcattgcaattatgtacggaattatatatttgttccaacttattgggtggaattgcagcctgttttttcttttttttcatgcgcaaagtattccattcaaagtgagggtggcgatgagcaattcaacttagaaccttcacttgattttgagaaacataaaaatgaccaagcatgctgggatcatcctatacatgataacgcaatcactggcatgcttttgtttggtctaaattttatactaactggtatggtagcacaagagaggaaagtatagccactcctcgtggttttgtcaatgtataagtcatcattcacgatggcattagcaaatggttttatgcttaactagttaattttgtgtagtaagactagtgagcaactacaaacacattatgcacagactacagagttgtgccatgatgatgaattatttgaggaaaaaaaaaaggaaatatggactgaatattgtggatgtttgtcatgctattgactaagatactaggtcttctgattaacaagtcaccttttcaattgttgtaccttcccattttctcttcaaccttttccttcaactccttatccccccccccccctcatgtcatcagaattttctataaaatttgccatttaagaaaatatatgatgtaaattagttggagcttgaaaatgttacagttacaaaagcaagtatttacggcagaggaagcaatttttttctacatagtcaatatggttcaaatactgtatgcgtttgttcgatacaggtatctgtttttttgttctttctgtgcatccttaggatttctcgctcttctgacttgagatattgtagctctaagcctgtaatagaatccaatgattgtcttactgcaatactatttcagcatgttatccaatttgaatctacgcatacttactgttggttttacagtggatctcaattaattgtgattatgaaatttctcttgtcatagctgctgcttaccctagccatgctgtggacatggttcccataagaactcttcaggtaagtttttcatcttcatttctctcattacatggtgtgatgcaatagattatagttgcacaaaaagtgacgagggcattagttcagacacttcatatctgggcatgtgcatctggtgaaactttgtaagatgcacttatctttacagtactgatttgactagtatcaattccaagttgctaattctgcaacttgcttgcctgggatcatcagatgttacgttacaatgaagctttcaggatgagaacagtgctagcgcagttggcaggggcagtcgtgggatggaatactgttgcttcttaaaataatgaaaatcaaggtttggtgtccaagttttttttttttaaaggaaacctttcaggataaacttaacttcaatacgttatgttgagacttatttagcaatggctatcagcagttttttttttctgttcacttaagtttttacaattcagcttactagatatcaaacatcattatgttgaagtgatgagtaaatttctgtcaggttttgccagctatcaagttaattagaatgccgtaaagctggagtgctgcacaagtgcattacccatagaaatttatttacatagtgattgtgcgtgattgtaggtgagttatatcaagttagatcaaaaggaaggtgtgcaagatctatatgtggtgaattgaagatgttcagtgcttcaagcggtaactaaaatccgaatagacgaaaataaagaaaataggtctaatcgttgacatggtaccataaaaagttaaatatttttggctttaactcgtgtcgttctttcaaaagttcagtttcctagacaccacacgtcttcattctcccatgtcttcaattgtatcttgctaatcattactccctccattccataatataaggcacaaccactttttttttagatgttccataatataaggcatgcatacatgtaggcaattaactatgatccattctccattaaattattacttttttaaatcctacactctcatgttctctaattctattggatgcatgcattgtatttactaggtgaaactccgcgtattgctgcgggaatttagtatgaagatatacattgaaacattatttgaattatgtcggatgataatttaacatgtttgtgtttgaaaagctcttaaattataaaaactataaagatatagcatgtttgcatgatgtttaaatgtgatgattgttagtggatgatgatgtggcatcttgttaattagtggatgatgatgtggcatctttgcatgaagatatacattgaaacattatgtgaattatgttggatgataatttaacatgtttgtatttgaaaagctcttaaattataaaaactataaagatatagcatgtttgcatgatgtttaaatgtgatgattgttagtggatgatgatgtgacatcttgttaattagtggatgatgatgtggcatcttgttagtggatgatgatgtggcatctttgcatgttaagcttaaggagttagtgcgggataactttatagtaagatatgattaggatgatccaaactacaagatgataataattgtttcttggtctttgggttaggggtggttatgccttatattttggaatggagggagtacctagtaactagtggcactcaacttataaggtgacatttcctagaagcatgttgtctaagagtaatcttgctagcaagagctcataattttccattgtcagcaaccaactcttattcatggtccatactcaagtcttaatcttaaattaattgaaccatctaagtgaacagcagattcaccttggatctttctaacgtcagtgcctgtgattgttactcttgagttgttttttcctggctgaagggatggcaggccatgctagttgccataattgtatgttgaattgttggttggtgatttgttccaggataacatatagagatcttatcataaacagaaactgtaggataccaataactaccaattgaattgtagtagtccaaggctggattcatttgtttgtttacaactttacatgttgtattactgcagattaactcttgatctcttgcaggatatccatgaccgacagcaaagtgtgataccaagaaattttgctatgcgttctcctagttctggaagccaacatgatggattctcatattggaacatggggaggtttcggcgaaacaccaccacttccttggtctcaccgactggtgtcacacctagcagttttggcaagaagaggaacgccgattcaagcaatttcctccctctgaagttcaggaaaatgagcggggcaacttgacagccggccaatgcatcattgagggcataaattctctgctctctggaatagcatgcagtaactcaattcacaacgtaatactatagcttaaggaggctggagctggcggcatttttggggcaacctgtaaattgtaaatttgccccatatccgttgcatggtatccaaatccaacacaccgatgtgtttggtcattggtgctgggtgccactactaacctgcatgtttgtagaatctggtggcaccatatatagccgtatagatagggagatgcaatgtgccacatctctcacgatgcttgtatacctcggaaataaagcattgcgtgcacttatacaacagttttgccatgagaaaggctctatgttgctgaacattttttgtttgcccctcttgtatttatgatgtaatcgacttgattaatactctctccggttctgtaattcttcttgttttggataaagttgtggttaaactattagaactttga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0687200, RefSeq:Os03g0687200