Os09g0262000

From RiceWiki
Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0262000| Description = Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44)| Version = NM_001069247.1 GI:115478233 GeneID:4346551| Length = 372...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0262000

Description

Similar to Cinnamoyl-CoA reductase (EC 1.2.1.44)

Version

NM_001069247.1 GI:115478233 GeneID:4346551

Length

3723 bp

Definition

Oryza sativa Japonica Group Os09g0262000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5157131..5160853

Sequence Coding Region

5157131..5157266,5157432..5157506,5157988..5158071,5158332..5158486,5159015..5159194
,5159714..5160069,5160697..5160853

Expression

GEO Profiles:Os09g0262000

Genome Context

<gbrowseImage1> name=NC_008402:5157131..5160853 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:5157131..5160853 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccaattcccctcacccaaaatccatccccatctccacagcttggccggaggtgccatgggtggaggtgcctttggcggagcttggtccggttggtgacaatggatatgggcaagccattgatccggttggagattgtgattttcttcccccatgcgctattttctcgatggatgatgggatagcgtttctgctgggaatgcttgaaggagcaggaggcttcattgggtcgtgggtggtgaaggagctcctgctccgtggctatgccgtgagaggaactgcaagagatccatctagtcaaaagaactcccatttgcaaaaacttgaaggagccaaagagaggctctgtctgaactatgcagatgtgatggactatgatagtctttctgttgcatttaatggatgtgaaggtgtattccatgttgcctcacctgtatctgttgatccgcgacttgtgcctgttgctgttgaaggaactaagaacgtgatcaacgctgcagcagacatgggcgtacgacgcgtggtgttcacatcaaccttcggtgctgtacacatggacccaaataggagccatgatacagtcgtggatgagagctgctggagtaaccttgagttctgcaaacaaaaagactggtactgttatgccaaaacggttgctgagatggtagcagcagagcaggcatcgaagagagggattcagctagtggtggtgcttcctgccatgacactaggccagatgttgcaatcaaccataaaccctagcatcagacatatcgccgatttcttgaacggaagcaggaaaacccaccggaatgctgtcgctgggtatgttgatgcgcgcgatgtggcccgtgcacatgcactggtgtatgaagaccccaaggcgcatgggcgttatctctgcattgctagtgtgcttcaccggtccgagcttattcagatgatcagagaactctttccacagtatccaatcacctgtaacaagtgtgaagacagcaagcagatggtccaacctttcaagttctctaatcaaaggctgagagacttgggcctcacattcacccccataaaagaaagtttgtacaacacactgatatgcctacgggagaaggggcacctaccgccttattcatctctttga</cdnaseq>

Protein Sequence

<aaseq>MTNSPHPKSIPISTAWPEVPWVEVPLAELGPVGDNGYGQAIDPV GDCDFLPPCAIFSMDDGIAFLLGMLEGAGGFIGSWVVKELLLRGYAVRGTARDPSSQK NSHLQKLEGAKERLCLNYADVMDYDSLSVAFNGCEGVFHVASPVSVDPRLVPVAVEGT KNVINAAADMGVRRVVFTSTFGAVHMDPNRSHDTVVDESCWSNLEFCKQKDWYCYAKT VAEMVAAEQASKRGIQLVVVLPAMTLGQMLQSTINPSIRHIADFLNGSRKTHRNAVAG YVDARDVARAHALVYEDPKAHGRYLCIASVLHRSELIQMIRELFPQYPITCNKCEDSK QMVQPFKFSNQRLRDLGLTFTPIKESLYNTLICLREKGHLPPYSSL</aaseq>

Gene Sequence

<dnaseqindica>1..136#302..376#858..941#1202..1356#1885..2064#2584..2939#3567..3723#atgaccaattcccctcacccaaaatccatccccatctccacagcttggccggaggtgccatgggtggaggtgcctttggcggagcttggtccggttggtgacaatggatatgggcaagccattgatccggttggaggtaggagttcttgggcgagtcatcgatccaactagaggcgggagctcactccggatgtaggcggttgtaatatggcatgagaaaagaggaataccaaatttgacgcttttctctctcgaatggtggacgcgctaaatttggtggtaacaatgacatatattttagattgtgattttcttcccccatgcgctattttctcgatggatgatgggatagcgtttctgctgggaatgcttgaaggtcattttgatttggcgttgcctggtggtccgaataattggttctgaaccgtctattttgaatgtcctcttagttattcccgtactattctggatcctttcctggattaatttaaaagaataagtaaatctccaccagaatttaatagcacgatttgaagaacttgacatacctcatacttacatgtgggcccatatgtacatactatgactagctagttgtaggacaacaagagtgtgtcattcctataactggctagtcattgtataccaaattcaaatttttattatgacgacgattacctcctccgtacgtgccagctaacttgtttgttctcttatgtgtggctttaaattgaagtcaggctgcacagcaggctgaagagtgaagaccacaaaatcaagcagctttattgtgcatttctctagctagctgtcgatgatggctaaggctgaagggggcaaaatggtatgtgtgacaggagcaggaggcttcattgggtcgtgggtggtgaaggagctcctgctccgtggctatgccgtgagaggaactgcaagagatccatgtaaagactacaaatcctttactgtgttttgatctcttttcagtgatacataaacaagtatatgcaaattatataaagccctagtctatttatgagtttgacgtaccatatatatgaattgtatttgcaagcatgaccttcataatttttttctccatttttacatttgaacttctccttatttagttcaaattatgatatatagtcaattattattattaatattatttttcattttgctgtattttctggatgcaaagctagtcaaaagaactcccatttgcaaaaacttgaaggagccaaagagaggctctgtctgaactatgcagatgtgatggactatgatagtctttctgttgcatttaatggatgtgaaggtgtattccatgttgcctcacctgtatctgttgatccggtgagtctctcaatttcatgccagcaacatcattgtttaggctcatgcttaccggtcataaatattttataaacttcgttttgaaaaataagattaggattcaaaatgcattcctgtatcaattctcatgattcctattacttcaataatttcaaatctaatcagataattcgaagggaatctaagctattcaaaatctataaattaataattaaagtgactaaaactgaatcttttgactaaccttatatttattactaccaacctgaaatatagggagtaatttagaacaatattgaacaaatcttttaattctataatacataaataagtttatacgatactatttttcaaggctaatctaggcatagattttttttctaaaactaatcatttgagatattactgatggtaaaaaaattaaaagtttgataacatcttatactaaaaatcaaatatacttatgacagtagggagtaattggtaattttgttgattctgagtgtagttaaattcatatgtgtgcagcgacttgtgcctgttgctgttgaaggaactaagaacgtgatcaacgctgcagcagacatgggcgtacgacgcgtggtgttcacatcaaccttcggtgctgtacacatggacccaaataggagccatgatacagtcgtggatgagagctgctggagtaaccttgagttctgcaaacaaaaagtaaagtagatttaatttccttattaaagcagcatgctctatgttagctaatactacattcgctccaaaacatagcaatatagaatacgatagaacatatacgtactacaaatcgaatttgcataggctccgtctaaattcctagtattaggaatgcatcctattttatcctgaattgttatattttgaacgtagagaatagtatatcttttctctaacgatctaatagtacatttttgaaaatataatagttataatagacttatttatttatcgtaagataaattaagccagatatatgcatgctggataattgcaacctgaagaaccacacataattatttatgtgttgtgcattaaacaaatgcagtttccttcattccttggccatcattattatgtactaccccctcttaatcttctgaaacataaacatatctagctataaattcggataaccgcatgttgaaatcatattttgataaggatgtagtactaattttttaatttcaaatataggactggtactgttatgccaaaacggttgctgagatggtagcagcagagcaggcatcgaagagagggattcagctagtggtggtgcttcctgccatgacactaggccagatgttgcaatcaaccataaaccctagcatcagacatatcgccgatttcttgaacggaagcaggaaaacccaccggaatgctgtcgctgggtatgttgatgcgcgcgatgtggcccgtgcacatgcactggtgtatgaagaccccaaggcgcatgggcgttatctctgcattgctagtgtgcttcaccggtccgagcttattcagatgatcagagaactctttccacagtatccaatcacctgtaacaagtaagaaactatactccctctattttttcatacatattaccgttgacttttaataagatatttgactatttgtcttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatgttatttattttgttgtggcttatttcatcaccaaagaaactctaatcttatatttgtgcatatttacactaaatttgaataagacgaatgattaaacattacgcgaaaagtcgacacccccccacacacacgtatatatggaaaatgttatttattcttaatgaaatggtttatataactagaattaatattgctccaattattttagaacagtaaagctgaaatgcatcaacgttccatggaaaaaaacaaataatacatggacattgatattcttttttgttagagtcataagatagtatacatccatgcattatcttattatttagtaaaagtatgagtaaagaaatagcatccattttggcttgtttattttacatatatatatatatatatattttcaaaaatgacatgttaattatttccatagaaattttgcaattatcaattgtgtgtgtttgtgtgttttctttgtttcataactaggtgtgaagacagcaagcagatggtccaacctttcaagttctctaatcaaaggctgagagacttgggcctcacattcacccccataaaagaaagtttgtacaacacactgatatgcctacgggagaaggggcacctaccgccttattcatctctttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0262000, RefSeq:Os09g0262000