Os03g0691400

From RiceWiki
Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0691400| Description = Phenylacetic acid degradation-related protein domain containing protein| Version = NM_001057489.1 GI:115454706 GeneID...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0691400

Description

Phenylacetic acid degradation-related protein domain containing protein

Version

NM_001057489.1 GI:115454706 GeneID:4333780

Length

2868 bp

Definition

Oryza sativa Japonica Group Os03g0691400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28405073..28407940

Sequence Coding Region

28405309..28405461,28407280..28407471,28407565..28407714

Expression

GEO Profiles:Os03g0691400

Genome Context

<gbrowseImage1> name=NC_008396:28405073..28407940 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28405073..28407940 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgccacgtcgtcgtcgtcgcgggcgccgcggcccaagacggaggagctggacgcggcgctccacgccatggggttcgagatcgagcgggtctcccccgcggaggtcaccggccgcctcctcgtcacccccacctgctgccagccgttcaaggtgctgcacggcggcgtgtcggcgctgatagcggaggggttggcgagcatgggggcgcacatggcgtcgggctacagccgcgtcgccggcgtgcagctcagcatcaaccacttccgcagcgccgccctcggcgacaccgtcctcgtccgcgccgccccgctccacgtcggccgctccacccaggtgtgggcggtgaagctgtggaaattggatccatccacgaaggagaagggggctcagatctctgaatccagggtgactcttctctgcaatctgccggtgccggagagcgtgaaaaatgcaggggaggcgctcaagaaatactctaaactgtaa</cdnaseq>

Protein Sequence

<aaseq>MDDATSSSSRAPRPKTEELDAALHAMGFEIERVSPAEVTGRLLV TPTCCQPFKVLHGGVSALIAEGLASMGAHMASGYSRVAGVQLSINHFRSAALGDTVLV RAAPLHVGRSTQVWAVKLWKLDPSTKEKGAQISESRVTLLCNLPVPESVKNAGEALKK YSKL</aaseq>

Gene Sequence

<dnaseqindica>2480..2632#470..661#227..376#ggcctccgccgtccgccggtctgttccggccagtccatctataatagcgacccaacaaaattccgtggcttcctctcctccccccacgccctctgtcgcgctcaggctcagctccctccccgaccccgagagagatagcgtagcttcaattcgctactgctccccgcgcgtgctcctccaagctactagcagtctcccgcctccgtttacccggtccggctccggcatggacgacgccacgtcgtcgtcgtcgcgggcgccgcggcccaagacggaggagctggacgcggcgctccacgccatggggttcgagatcgagcgggtctcccccgcggaggtcaccggccgcctcctcgtcacccccacctgctgccaggtacgtacgcgccacgcccactccccctcccctcccgagccttggattaattcgtgtgattgttatactgatcgatggatggatggggcgcagccgttcaaggtgctgcacggcggcgtgtcggcgctgatagcggaggggttggcgagcatgggggcgcacatggcgtcgggctacagccgcgtcgccggcgtgcagctcagcatcaaccacttccgcagcgccgccctcggcgacaccgtcctcgtccgcgccgccccgctccacgtcggccgctccacccaggtaacctcacccatcatcctcaattcctcttctctgctgctatgctagctacctacctacctcatcatcgcccatcacctaacctaccactccatcggtgacttctcactacactattctccaattggttgcttactagtaccacaagtcaactaactcatccgtccagccagttcatcactaattactagtagtaattacccacacccctagtttaatctgctttaaccacgccgattaattaatcagtaggtgccggattagtaccacttgattaagacaaggcaccaccacctgtcattccgtgcgtgctggccatacctaatgatgcaagcgagccgcctcttaaatccccatacgaagttgttgatgatgggttcctctcgtttcgcatataattcattatgagatatatagaaatatagtaaaaacttttatgtttgagagtatccgagatagatatgaaaagagccttgttttttcgcatacgcttcccgaactgttagacaatatgttttttttataaagttatagaaaagtctctttaaaaatcatattatttcatttttcatgcttaaaataattaatacttaattaattatgcaataatcacctaaatttgcgtatcttcttaatcttttattttcatctcctctcaaacacactcaataatttaaaagccaatgcttaaaatataaactacgatgaaaaagcaccatactccgagagtccgagtaataaacaaaaaaaacgcaaatattatagagtagtatcaaataattagaaggggtgaggctttgaacccaaatcgtttagcccaccaccccaccttgtggagctagctagaataccccagtgcgtttctcagtccaagtaataaactgaagagcaaactatgatgctgctgtttactatagtactcctagatctttgcttactgggcctacctccatcgacaatgtcaggtatcacacagtgctagtacagatttcatcgttatgggaatagcataggacaatgatatataatatttaaccattttaacgccgttgacttttttaaatatgtgaccgttcgtcttattcaaaaacttttgtgaaatgtgtaaaactatatatatacataaaagtatatttaataataaatcaaatgatacaaaaagaattaataattacttaaattttttgaataaaacgaacggtcaaacatttttaaaaaaaacaacggcgtcaaatattttgaaatggagagagtatcatttatggtcaactttgagcccggggaaacaagccggtacagccaaaagcgacaggcaaccaatgtatttttctctcccaagatcggtgaggactgtagactgtttgtgatcaaaattgataagttatgggcacaaatcaatggggtagttgtcagctactacacagctagagatgtgtatttgagaaaaataaatgacattttaatacagaaaaaaagaagttgtagtgacagcaatctggattggttgaccatgttactcttataataaaacactgcaacatgtcgatctgctgatctctcaatcttcttatgaagaggataagatacacacggctaggctgcaacttgtcccagacaagcacagcctcatagacaaaataatttatctccaggctagccaattcaacatgtagcaataaaaattaagtcttctcctccgtacatttcacatgtctagtatttttttaggagctttcagcctgatgattggcagtaattaaaagaataattaattgtgttggaatcataaaatggatctgaagttctgaacttctgaaggtgtgggcggtgaagctgtggaaattggatccatccacgaaggagaagggggctcagatctctgaatccagggtgactcttctctgcaatctgccggtgccggagagcgtgaaaaatgcaggggaggcgctcaagaaatactctaaactgtaaacataataataattaaaagtacaaagcttcatttcgatgctggaaatgaaatggtttgatctcacgataatgtgacatattgtaagtctgttgtaataatgtatatgtcagaggagtcgaggtgtttggtttgggacaattttattgttcttcatgaccaaatttggtcgtgcgcaaaattaaatgtgtaaaaaaaaaaagaaagggtgaatggtgaagtatttggattccaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0691400, RefSeq:Os03g0691400