Os03g0692400

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Revision as of 12:53, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0692400| Description = Protein of unknown function DUF966 family protein| Version = NM_001057494.1 GI:115454716 GeneID:4333785| Length = 56...")
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Gene Name

Os03g0692400

Description

Protein of unknown function DUF966 family protein

Version

NM_001057494.1 GI:115454716 GeneID:4333785

Length

5676 bp

Definition

Oryza sativa Japonica Group Os03g0692400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28465778..28471453

Sequence Coding Region

28466326..28466614,28468113..28469046,28469143..28469258,28469342..28469411,28469493..28469649

Expression

GEO Profiles:Os03g0692400

Genome Context

<gbrowseImage1> name=NC_008396:28465778..28471453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28465778..28471453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagccgagggaggcggccgcggagcccggagaggcagaggccggcggcgaggaaggtgccggtggtgtactacctcacgcggagtcgccaccttgagcatcctcacttcgtcgaggtgcctgtctcctcgccggaggggctctatctcagagatgtgattagccaccttaacatggtgcgcggcaagggtatggccgctatgtactcgtggtcctgcaagaggagctacaagaatggattcgtgtggcatgatcttggagaggatgatctcgtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtcttcttcaggccaattttatcagggtaccaatggaaaccaaaagcaacagagcaggctgaaagagggtgcacggctgcctttgcctagagaggcttcctattcctcctcccctcctagtgtgatagttagagaagccaagccgaggcgttcgccttcggttccttctctagaagaggatgactcaccagtgcaatgcagagttacctccttggagaacatgtcgccagagtcggagcctcaaagaactctcttgtcaagggctggttccgcgagtcctgcagaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctcggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcatgactccgtagtccgggaaattactgagtaccggcaaagccaaccacgccggtcagcagagctccaagggatcgccagggaggccatgtcccagtgtcatactccactgagcataccttcatcccgtggcaagtcggagagtttagagtccttgatacgagcagataacaatgcattgaatagttttcggattcttgaagaggatgatatcattatgccaacctgccccaagctgaggccagcgaatgtactaatgcaacttatcacctgtggttcgctttcggtgaaagatcatgagaatatcagacttgttgaaggatacaagccaaggttcccaaacatgaagttcccgtcaccgttaatttctcgtaccatgatgatgggtgagcttgattacctgtcagagaatcccagattgatgggtatgcgtctggaagacaaggaatactttagtgggagccttatcgaaactaagatgcaaagagatgtacccgctgacagatattcagcgcttaaacgttcttcttcctacaatgcggaaaggagcaacgagacgctagattgcgcgagacctgacgaagacaccgtcaacacatctcgcgcaaggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggcaatgaagtcaccgatctccgactgccggaggagctcgtcggccggaccagactgcagccttgcttcatcaggagacggcagcaagaggttcattgacgccacaggagcaccgggcagcaggatagactctttcaggaaggaggagaagctcgtcaagatcgaagaaagttaa</cdnaseq>

Protein Sequence

<aaseq>MESRGRRPRSPERQRPAARKVPVVYYLTRSRHLEHPHFVEVPVS SPEGLYLRDVISHLNMVRGKGMAAMYSWSCKRSYKNGFVWHDLGEDDLVHPATDGEYV LKGSELLDQSSSGQFYQGTNGNQKQQSRLKEGARLPLPREASYSSSPPSVIVREAKPR RSPSVPSLEEDDSPVQCRVTSLENMSPESEPQRTLLSRAGSASPAEFRVYKPTGCVDA ATQTDDLGRRSVRKVPEMHKKSLSTDHDSVVREITEYRQSQPRRSAELQGIAREAMSQ CHTPLSIPSSRGKSESLESLIRADNNALNSFRILEEDDIIMPTCPKLRPANVLMQLIT CGSLSVKDHENIRLVEGYKPRFPNMKFPSPLISRTMMMGELDYLSENPRLMGMRLEDK EYFSGSLIETKMQRDVPADRYSALKRSSSYNAERSNETLDCARPDEDTVNTSRARCLP RTPILSSFLHPKSEAMKSPISDCRRSSSAGPDCSLASSGDGSKRFIDATGAPGSRIDS FRKEEKLVKIEES</aaseq>

Gene Sequence

<dnaseqindica>4840..5128#2408..3341#2196..2311#2043..2112#1805..1961#atcgtaaagatgaagccttttcgtacaaaggcccctccctccctctccatgttacaatgatggggaccccggacccgaaccctccgtgaacctggtccacgggctcccaacacatataccccgccataataaattctcggatgtagcccgaggggcaaccaacccactgtagggtgggcccgccgtgcgccgtggtccatacgcccggtccatcgctaaatactcgctcgcgtgctcgtactcctccctcctcgatcccggtaatcaccaccaccgtggcgttccgttcgcgtcgcgccgcgctcgcgttgcctccccgccccggcgcgagcgagcgagcaatcaatggcacccaccatgtccgccgccatcaccaccaccatgcccggcgtggcggcctcctcgtacgtgccccgtcctcgccgagcaggcagcagctagctagctaaccgccctcgccgcgcggtgtccgtccacacccccccccccccccccccggcgccgccgccgccgcgttacgcccgggcggctgtacactgcccccctcctcccgctttattcagctgtgctcgcgtcagcgtcgctcgtcgtggttttgacctccgccccctgacacgcgcagggcgcgcagggagctgcgctgcacctgcacctgcacgcacccctgcagggcgagggatgtccctgtcccactgcacggcacgcccgctacctgctcgataaaagttgcgcaagcaaaggtcagttgctctcgccattaacgctcccaaaaacctcggtttacgccatccgctcctcctccatttagttcgattggtcgcctcagcagagcgagccattgccgtgcctctctcgtgcggtgctcctcctcctactcttcctgctcccgttttggccgaaactttttggcaacatatctcgtcgagggccttggagccacctgcttgtccgttgcggcgtcgtcactggctgtagcaaaagtttcaatcttggaggtatactctctgctctgctctctctctctctctctcactcacgcacacgcactcctcatccatcgcttcacgcaatgcttggattttgtccctaggtatccgtttgctcctccttgtccacattcatctcaccttgcactcttgcggcgtgggcgtaaaaaggagataaactttcgcggttcttggagcaagctagctcgctagctaagcacacttcttgtcagtctatctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttcagttcagtcccctcatgtggctggttcactgagagcgaaaagggctttgcattttttcttcgaggtgccaccgcccacctgggaattcttgacctatcgattctctgtctgtctctctccctttatctgtatctgattgctgaaaaagtttcagagtcttgaatgttgtatggccacaaaaatgcagatgttggaggcacgctcctgttgatttctctcaagagctcaagtcttggagaggtgacagctgacaaggtgacccaatttgatgttttttactcgcttggaagttaccacgatttggatacgcccgttcaaccaccctgaatttctggccttgatcttgaattttgtgccttctgatctgatgttgcagcagcagcagggaagactcacagtttttttttttcttgggcgcttcagtctccgcttcttcttcttcttcttcttcttctctctgctgctcacgctgaactggcggtagttttggcggtttaattggagagcttggctgagatggagagccgagggaggcggccgcggagcccggagaggcagaggccggcggcgaggaaggtgccggtggtgtactacctcacgcggagtcgccaccttgagcatcctcacttcgtcgaggtgcctgtctcctcgccggaggggctctatctcagaggtcagtggatgccagcgacagcaacaaagaagtttctttaactctccctgtataatttactcttgtaatttacttttacagatgtgattagccaccttaacatggtgcgcggcaagggtatggccgctatgtactcgtggtcctgcaagaggtactgcagaattgttctcgttggtaataattttgggctgtctgaaatttaatttgatcggtttgagaaatgcaatctttcaggagctacaagaatggattcgtgtggcatgatcttggagaggatgatctcgtccacccggcaaccgacggcgaatatgtgctcaagggctccgagctcttggaccagtcttcttcaggtaagtgatcttccatgaattggcatttgtctctgaactttggactggaaactgcagtgctaagttgctgactattgttgccttttgcctgtttaggccaattttatcagggtaccaatggaaaccaaaagcaacagagcaggctgaaagagggtgcacggctgcctttgcctagagaggcttcctattcctcctcccctcctagtgtgatagttagagaagccaagccgaggcgttcgccttcggttccttctctagaagaggatgactcaccagtgcaatgcagagttacctccttggagaacatgtcgccagagtcggagcctcaaagaactctcttgtcaagggctggttccgcgagtcctgcagaattcagagtttacaagcccactggctgtgtggatgctgcaactcaaactgatgacctcggcagaaggtcagtccggaaagtgcccgagatgcataagaagagtttgagcactgatcatgactccgtagtccgggaaattactgagtaccggcaaagccaaccacgccggtcagcagagctccaagggatcgccagggaggccatgtcccagtgtcatactccactgagcataccttcatcccgtggcaagtcggagagtttagagtccttgatacgagcagataacaatgcattgaatagttttcggattcttgaagaggatgatatcattatgccaacctgccccaagctgaggccagcgaatgtactaatgcaacttatcacctgtggttcgctttcggtgaaagatcatgagaatatcagacttgttgaaggatacaagccaaggttcccaaacatgaagttcccgtcaccgttaatttctcgtaccatgatgatgggtgagcttgattacctgtcagagaatcccagattgatgggtatgcgtctggaagacaaggaatactttagtgggagccttatcgaaactaagatgcaaagagatgtacccgctgacagatattcagcgcttaaacgttcttcttcctacaatgcggaaaggtaagctttatttcttcaatacaaaatttgaacttgtgctcaactattttgaatttgaaggcttcagttttgttctcttatgagttctgagtgcatgtagatatgtgttgggtatttgggtgtctgggactatttaatgctatttgagtctttggcttgtgctattagttgtggaaatggttagatattttatccgtctgaatgtaggctgattctgtagcaatatatatgctatggttttcaattaagacagtgctttagaaaaaatgctctcgtatcgagcagaaatcgaaggctcgtacttttcagttgtataatgccctttttcattgattcattgtgcatttaccatgaaaacccagtttttttaccagacaatgctcaatgcatttaaccaaaatcagttgagcttggtagatctcctgcgtgtttgagaaaaaaaagttcagcttggtggccataagaataagatgcaagtgtatgaaatacatacctggttgagttatattcacggaaggggcttgttaggttaggagcagacaattaataatcagaaaagaaacatgtaccgtagataatttatgaacaaggaccattgcttttatcattccgttgatgtcaatgacaagggcgtttgtacttagcttagcttggtgccaacaccgctgcatgtctccataaaaaaacaaacactgcatccttgtcatattgtgcccagcatgcagctggcaaaccatatagcaaacaaaataagtaaatccaagaattttggagccccattgttgcaaaattgatgaaatatgcttattgagaaatacttgaaattaatttcaaaacggaaattttcactatcaccacaccaggcctttttattccctgcattttacattttcagtttttcttatgccttctacacaacctccacacaaggcctggtttgatgatttgaaaatagtgtaataaggagatattgagagtgaatagtttttctgaagatcttgccaaaaattaaacacagaaagcccttctgtcgcttctttttttttgtcattacttcgcttgtacagttctaattccatgcagctagcctgatttctacattggtacaacacgagccacccgtcagatgtagaggaccacgctagacagttggctggcaagattcttcagttgctcaactgaaatacaacagtcttactgtttcttcttgctcatgaacaatatgttgttatccttacaagctgccaatctagagggaccaacttgttaaatagtaggcactgccaaagccagcgaagttcttgcacagatccttgtcctcaatggaccaatgtttctcccagtttcttgaaatccaaaattttacctgcaaaaaattacagcatggtgaagagtttgttagaagcactgtcatctgcagccattcacaacttagcatgtgaattttcctctctttcttaatgaaacatgttcttacccatgaacaaacaatttgcaggagcaacgagacgctagattgcgcgagacctgacgaagacaccgtcaacacatctcgcgcaaggtgcctccctcggacgccgatactgtcatccttcctgcaccccaagagcgaggcaatgaagtcaccgatctccgactgccggaggagctcgtcggccggaccagactgcagccttgcttcatcaggagacggcagcaagaggttcattgacgccacaggagcaccgggcagcaggatagactctttcaggaaggaggagaagctcgtcaagatcgaagaaagttaagtgctagtggcctctcttaaccctccccaactctttgtcattgctgggtatgcactccatgcttattaccctttacaattagagcagcagaatctgcagaattttgcttctgcaatgaccccatcttggtattgagacctgcatcttttttttctgaaatttgttcctgcaggctgtcgtcaggagctcgagtcgtgattcagtacacggtgccctgcaatggcgacagcgatgaaggctgagcttgcacccatgatcagcgttgagttattcatataggctctgttgatagagagagatcaagttactgacgaaatgaaatgcctctcgtttctttcttcagattgagatgttaagtttggaattatttttcaagcattcagttagcctagagtattcttctctcttcttcctatctttacgttattatcaaaatctcttctccttatcatctgtaagtgcctttaaattaattatagagtataatgtattgttcgttttgtattttgcttctgtccttaaatcaagagagagtagtgatcttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0692400, RefSeq:Os03g0692400