Os03g0695500

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0695500| Description = Protein of unknown function DUF1517 family protein| Version = NM_001057510.2 GI:297601518 GeneID:4333802| Length = 3...")
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Gene Name

Os03g0695500

Description

Protein of unknown function DUF1517 family protein

Version

NM_001057510.2 GI:297601518 GeneID:4333802

Length

3499 bp

Definition

Oryza sativa Japonica Group Os03g0695500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28615230..28618728

Sequence Coding Region

28615230..28615895,28616368..28616470,28617001..28617056,28617361..28617525,28618123..28618236
,28618636..28618728

Expression

GEO Profiles:Os03g0695500

Genome Context

<gbrowseImage1> name=NC_008396:28615230..28618728 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28615230..28618728 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccgcgacgacctcgctgctcctggaggccaccccgcgcctcctctcgctgccgccgcggcggcctgtgcagccccgtggtggcatcttcctcctcaagccgccgccgccgccgcctttcccctcccgccgcggggtggcagtggcggtggcaccgcccctccgcgcctcccacccggacacggcgcgccgggtgtccgtgtcccccgcggcggtggagccgccgcccaagccccgcgcgctgctcgacgcgatcaagaggtccctcctcgactcgctcgcggcgctcaagaagcccgcgctggcgctgctcctcgccggggcgctgctcgcggcagcggggccacaccacggcgccgcgctggcggcatcgggcggccgcgtcggcgggtcggcgttctcgtcgcggtcgtcgtcgccgccgtcgtcctacgggtacaccgcgccggcgccgaggggcgggtactcggccgcgcccttctactcgccctcgccgttcgtgtccgtcggcccggcggtcggcatcgggttcgggggatccagcttctttttcgtccttatggggttcgccgcgttcctttacctcgccgggttcctctccgattcctccggcggtagcgtgctcaccgagacggacaagaccaccgttctcaagctgcaggttggtttgctgggcatggccagatcatttcagaaagagcttgatcagatagctgagaaggcagatacttctaccccggcagggctgagctatgtgctaactgagacaacattggcattacttcggcatccagattgctgcatctcagcttactcatcagttgatgtgaaaagaagtatagatgatggggagaaacgttttaatcaactatcaattgaggaaagaggcaaatttgatgaagagacacttgtgaatgtgaacagcatcaagaggcagaaagcaggcagccaaagatcgagcggttttagcaacgagtacattgtgataaccatattggttgctgctgagggtgtacataagctacccagtataaatggcagcggtgacttgaagacagctctacagaagcttggtgccataccatcaagaaaaatactggcagttgaggtactatggactccacaaaatgagaatgacacattgtcagaacgagagctgctcgaagattacccgcttttaagacccctatga</cdnaseq>

Protein Sequence

<aaseq>MAAATTSLLLEATPRLLSLPPRRPVQPRGGIFLLKPPPPPPFPS RRGVAVAVAPPLRASHPDTARRVSVSPAAVEPPPKPRALLDAIKRSLLDSLAALKKPA LALLLAGALLAAAGPHHGAALAASGGRVGGSAFSSRSSSPPSSYGYTAPAPRGGYSAA PFYSPSPFVSVGPAVGIGFGGSSFFFVLMGFAAFLYLAGFLSDSSGGSVLTETDKTTV LKLQVGLLGMARSFQKELDQIAEKADTSTPAGLSYVLTETTLALLRHPDCCISAYSSV DVKRSIDDGEKRFNQLSIEERGKFDEETLVNVNSIKRQKAGSQRSSGFSNEYIVITIL VAAEGVHKLPSINGSGDLKTALQKLGAIPSRKILAVEVLWTPQNENDTLSERELLEDY PLLRPL</aaseq>

Gene Sequence

<dnaseqindica>1..666#1139..1241#1772..1827#2132..2296#2894..3007#3407..3499#atggcagccgcgacgacctcgctgctcctggaggccaccccgcgcctcctctcgctgccgccgcggcggcctgtgcagccccgtggtggcatcttcctcctcaagccgccgccgccgccgcctttcccctcccgccgcggggtggcagtggcggtggcaccgcccctccgcgcctcccacccggacacggcgcgccgggtgtccgtgtcccccgcggcggtggagccgccgcccaagccccgcgcgctgctcgacgcgatcaagaggtccctcctcgactcgctcgcggcgctcaagaagcccgcgctggcgctgctcctcgccggggcgctgctcgcggcagcggggccacaccacggcgccgcgctggcggcatcgggcggccgcgtcggcgggtcggcgttctcgtcgcggtcgtcgtcgccgccgtcgtcctacgggtacaccgcgccggcgccgaggggcgggtactcggccgcgcccttctactcgccctcgccgttcgtgtccgtcggcccggcggtcggcatcgggttcgggggatccagcttctttttcgtccttatggggttcgccgcgttcctttacctcgccgggttcctctccgattcctccggcggtagcgtgctcaccgagacggacaagaccaccgttctcaagctgcaggttcatcccgtccctcggttaacattttatttatcgaagcaatttacattagcgaggaccaattgctatgatcatttcttatgttagcaaagaagagatgcaaatgaattgctgttagattggttagttatacagtatacttaatccacttcttgattagcacggagtgacattgtaatcgagcatggcctgatagactggtctaccgtgaggcttgattagaattgatatttgaagctagtatttggttgtgagttgctttctgaagtgctaaattcttctcttagggcttgttcggttcatacctttgcccacaaagggattaaaggggatttggaagggatttattccacacctattgtggtgtcgaattattcctcttcaatcccctccaatccttgggattggaggggattgaagaggaatcagtttttttttttttttactttctaacctataagtatgttcctaggttggtttgctgggcatggccagatcatttcagaaagagcttgatcagatagctgagaaggcagatacttctaccccggcagggctgagctatgtgctaactggtaaaaccaaagctatcagatcatatatgctgcttcattctacttcagagtaattttatggtgtagatattttgaaatggcatagttctgtttcttttggctcttattgctgtcacttgatgtcaatataccgcttttattttgagtgccttattttgagtgctatgtttgagtagcagatgactgagtttatctaccttggtttgttcagaaagatcattttcatattggccggcaaagtttcatctataatggatatcaggagggggttttggttttggagagcaatatgtaaaaataaaaagaaaatggtggttttttactagttgtgtttgttggcggttatacatgctcctgaaataaaattgttagtgataatgtagctatgtagtcaaagtgtccaacctgcattacactgcaattcattttgaatgaaaaataccaagatatgatattatgatattttcttaagattttttactattgcgttgaaatcatctgaactatggttcttttcttctgttttgcagagacaacattggcattacttcggcatccagattgctgcatctcagcttactcatcagtatgcatactttgtccttgagtttttatttatcacttacccttcactcttccaatgtattattactgaaatcatcttattcttctattcatccttcaatagaatgtaattaagttttactatcgctcccagaaaaatgaaaagaaatgtttgaaatgttatatgtgttctttatataatctataggcataatgtataacatgcgcggccactatatcatgtagtaatcatttgttgccaggtcatatagatttgaattttgacaagctccttactgtatatatttttaatatttgttctaaaggttgatgtgaaaagaagtatagatgatggggagaaacgttttaatcaactatcaattgaggaaagaggcaaatttgatgaagagacacttgtgaatgtgaacagcatcaagaggcagaaagcaggcagccaaagatcgagcggttttagcaacgagtacattgtggtatgtttttttctttaggaaaaggtgatcaggtgatcagatcaaggcgttcccttttatgtgatacttgacatcatgcaatggccggtaacatgggaacttcattagtgatatagcccccattactgatgagtgattgatattttgtatattttcacctagtagaataaaaataatggatggcattggaagattctgtcatgatatagcccctattagtgatattgccttacccatactgttctttacttcttttgtactttaatatcaatattttgaactgctatgaagcacaaattgttgttactcaagaactttcatttataatggagtagtgatttattggctagcaatctagcattagtagcaaattctttttgagctactacgatgataccatgtaggatcccttttatcatttcaatttacatttaaagaacactataattccagtcatatagcactattctggtgttcctggggttttcatgttctaattccagcatttgtaggtttgatcgataaaatgtttctgattacctgtgttgctagcaatcatcatgcaatatcttatatgcttttgcttcttatccgtagataaccatattggttgctgctgagggtgtacataagctacccagtataaatggcagcggtgacttgaagacagctctacagaagcttggtgccataccatcaagaaaaatactggtaccctgcttgttcctttgatgttcttattcttctgttcatggcattccaatttcattgaaataaaacataaatataagcagcgatctgctgacactacaaacttgttccacattgacgtaatgggctgagttcaataaagcttttattatcgaaaaggaaaaatcttgttccacttcagtatgcaatatatttatctagtacattaaccttgaagaacgctggtagactgaaactctgcaaatggaagttgcagcaaatctttatctcgttgtaatgaacattcaatgagcattatgattaaaaaaccggttgattaactgattatctacctctgttgatatgattacgttgtaatattgacgtttcttatttttattctcttgtttttctctgcaggcagttgaggtactatggactccacaaaatgagaatgacacattgtcagaacgagagctgctcgaagattacccgcttttaagacccctatga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0695500, RefSeq:Os03g0695500