Os03g0695700

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0695700| Description = Similar to Chloride channel protein CLC-d (AtCLC-d)| Version = NM_001057512.1 GI:115454752 GeneID:4333804| Length = ...")
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Gene Name

Os03g0695700

Description

Similar to Chloride channel protein CLC-d (AtCLC-d)

Version

NM_001057512.1 GI:115454752 GeneID:4333804

Length

2289 bp

Definition

Oryza sativa Japonica Group Os03g0695700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28622199..28624487

Sequence Coding Region

28622622..28622703,28623120..28623166,28623257..28623358,28623457..28623613,28623696..28623773
,28623857..28623912,28624023..28624100,28624202..28624333,28624409..28624486

Expression

GEO Profiles:Os03g0695700

Genome Context

<gbrowseImage1> name=NC_008396:28622199..28624487 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28622199..28624487 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttatgtgttataatggttgaaattactaacaacttgaaactcctgccgttaatcatgcttgtgcttctgatttctaaggccgtgggtgacttttttaatgaagggctgtatgaagtgcaagcccaattaaggggcatccctttacttgactcaagacccaaacaggttatgagaaatatgagtgcgaaggatgcctgcaagaatcaaaaggttgtgtcccttcctcgcgtttcaagaattgttgatattatttctgttttgcgaagcaacaagcataatggcttccctgttgttgatcgtgggcagaatggcgagtcacttgtcataggtctgatacttcgtagtcacttacttgtacttctgcaatctaaagtagatttccagaatagtcctttcccttgtggacctggtatactcaacaggcacaatacaagtgactttgttaaaccagcatcgagtaaaggaaagtcaattgatgatattcatttgacagaagatgagctagggctgtatttggatctcgccccatttctaaatccttctccttatatagtgccagaggacatgtccttagcaaaggtgtacaatctcttccgccaactaggattgcgacatatatttgttgttccacggccttctcgtgttgttggattaataacaagacaagatcttttacttgaggagaacggcaataatgtgacaactgagctccagtcgactagtgtaaggggtcagctgaatggcaaaatgctcagtggcagcacacatctggggcatcctcttcttgatagtattgtggttgaggagtaa</cdnaseq>

Protein Sequence

<aaseq>LCVIMVEITNNLKLLPLIMLVLLISKAVGDFFNEGLYEVQAQLR GIPLLDSRPKQVMRNMSAKDACKNQKVVSLPRVSRIVDIISVLRSNKHNGFPVVDRGQ NGESLVIGLILRSHLLVLLQSKVDFQNSPFPCGPGILNRHNTSDFVKPASSKGKSIDD IHLTEDELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGL ITRQDLLLEENGNNVTTELQSTSVRGQLNGKMLSGSTHLGHPLLDSIVVEE</aaseq>

Gene Sequence

<dnaseqindica>1785..1866#1322..1368#1130..1231#875..1031#715..792#576..631#388..465#155..286#2..79#tttatgtgttataatggttgaaattactaacaacttgaaactcctgccgttaatcatgcttgtgcttctgatttctaaggtatatatgtgcaacccttgtctcctttgatgaacataattcaataaaatgcatcttctgatttcttttatgtaggccgtgggtgacttttttaatgaagggctgtatgaagtgcaagcccaattaaggggcatccctttacttgactcaagacccaaacaggttatgagaaatatgagtgcgaaggatgcctgcaagaatcaaaaggtttggagtagttatatctatttaagtgggattgagaaatatattctttatcaatagtgttccaatttctaacacttacaatcttctgttttttatgttaggttgtgtcccttcctcgcgtttcaagaattgttgatattatttctgttttgcgaagcaacaagcataatggcttccctgtaagttacaaagacagttcattaaacatgtttctgtggagtctccggcaattgactcttttaggggattaagttgttgaatccataattaatttttatgaggatttcaggttgttgatcgtgggcagaatggcgagtcacttgtcataggtctgatacttcgtaggtaagatacaatgccaagttctctcttgaaattgttgattcgtattaccttgttcagtgacccaaatcatcctcttgttgcagtcacttacttgtacttctgcaatctaaagtagatttccagaatagtcctttcccttgtggacctggtatactcaacaggtttgtgcttttctatcataagtagaaaatatgattatctaatgtagtttccactggtaataatgttttttttgctacaaaggcacaatacaagtgactttgttaaaccagcatcgagtaaaggaaagtcaattgatgatattcatttgacagaagatgagctagggctgtatttggatctcgccccatttctaaatccttctccttatatagtgccagaggacatgtccttagcaaaggtatagtcttcttcttcatcatcatcatttttgcttttaaccatgcctattttattgaggtgtgatgcatgcatgatctttctgctgataattttcaggtgtacaatctcttccgccaactaggattgcgacatatatttgttgttccacggccttctcgtgttgttggattaataacaagacaagatcttttacttgaggtgaaaagcaaactcatgatactgtcgtatagaagttaagaaatattaattgtctggacacccttttaagtgttaatgtcttgattgtaggagaacggcaataatgtgacaactgagctccagtcgactagtgtaaggttttgatgctgctgccctcaaattttgtctacatttagcaaaactcttcagttttcctcattctggttctaactgtatttgcttatagctcaaggtttatttacttggttcctactggcaatttggcactgaactttaggaacttttaattgtagaaattgatatagttatgcccttttcttccttgattttggtgatacgttgacatgtccagggacagagagaaggctatagtattttgtttttcactagctgaacccagtaaatcacttgcatattctgatgacatcttttatgtagtactggatttgcttgcttttatttttgtaaaaaaactgcggggcaaatcaacacattttattcattaagcaagttctgccattttggattgactgggagatattcttttatgcaggggtcagctgaatggcaaaatgctcagtggcagcacacatctggggcatcctcttcttgatagtattgtggttgaggagtaaatacatgtgaccataatctctcaagataattttgaccgcaagcagctaacctgtcactgcatcctggggcatgtttagctcctcgaacaaggcggccctggactctggctgatgcaacatgaattggattctgcaatcctatgcgacagaaagggtagcaatgagctatcctcatgtagtggctaattaggtgatttgccccataccttggatactagttaggtgattgtaagttgtaactcgtagaaatgtttagatgtttatacccatcatccgtgcataccacgagaaaacatctgattatgtttacacaacgattttataggattcatttttctttacaggagtttgcgcatgtaaataccttttttttttcttaacgggaattacagggaagccccagacctgaggcatgagttcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0695700, RefSeq:Os03g0695700