Os03g0696000

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0696000| Description = Harpin-induced 1 domain containing protein| Version = NM_001057513.1 GI:115454754 GeneID:4333805| Length = 4406 bp| ...")
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Gene Name

Os03g0696000

Description

Harpin-induced 1 domain containing protein

Version

NM_001057513.1 GI:115454754 GeneID:4333805

Length

4406 bp

Definition

Oryza sativa Japonica Group Os03g0696000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28638373..28642778

Sequence Coding Region

28638484..28639089,28642361..28642432,28642517..28642519

Expression

GEO Profiles:Os03g0696000

Genome Context

<gbrowseImage1> name=NC_008396:28638373..28642778 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28638373..28642778 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaaggcgcagcctccgcctgcgcgggagcccctgctcccctcctccgcctccccgccaccctatctggacgcccgcgccggcgccgacgccaacgcggactcgtacgtcctcctcgtccccgtgcggctccgccggctgcggcgcgggtgccgctgccgctgcctcggcccgctcctctccacgctcgcgctgctctccctcgccgggttcctcctctggcccgccgacccggacgtcagcgtggcgcgcctccgcctcgcgcacgtctccgtctccgcgcgccccaccgtccgcgtcaccatctccgccgcgctcaaggtccgcgtccggaacccggacctcttcgcgctcgactacggccgcctcgacgtcgacatcggctaccgcggcgcgccgctcgggcgcgtcacctccggcggcgggcgcgtccgcgcgcgcgccgtctcctacatcgacgccaacctcagcctcgacggcataagcgtcgtggaggacgcgatctacctcctcgaggacctcgcgcggggatccgtgcccttcgacaccgtcgctgaggtcgagggccacgttcacttgttcttcctcagcatccctgtcaaggggagaatatcttgtgtggtgcatattaacccgcacaatcaaactatagtacaccaagactgctatccggattga</cdnaseq>

Protein Sequence

<aaseq>MAKAQPPPAREPLLPSSASPPPYLDARAGADANADSYVLLVPVR LRRLRRGCRCRCLGPLLSTLALLSLAGFLLWPADPDVSVARLRLAHVSVSARPTVRVT ISAALKVRVRNPDLFALDYGRLDVDIGYRGAPLGRVTSGGGRVRARAVSYIDANLSLD GISVVEDAIYLLEDLARGSVPFDTVAEVEGHVHLFFLSIPVKGRISCVVHINPHNQTI VHQDCYPD</aaseq>

Gene Sequence

<dnaseqindica>112..717#3989..4060#4145..4147#aatcaacctcctcttccttcctaagctacgccaaagcccactccccgcaaccacccccacacccccaccaccggcgaccaccgcccccaccaacctcgccctcgccctcccatggcgaaggcgcagcctccgcctgcgcgggagcccctgctcccctcctccgcctccccgccaccctatctggacgcccgcgccggcgccgacgccaacgcggactcgtacgtcctcctcgtccccgtgcggctccgccggctgcggcgcgggtgccgctgccgctgcctcggcccgctcctctccacgctcgcgctgctctccctcgccgggttcctcctctggcccgccgacccggacgtcagcgtggcgcgcctccgcctcgcgcacgtctccgtctccgcgcgccccaccgtccgcgtcaccatctccgccgcgctcaaggtccgcgtccggaacccggacctcttcgcgctcgactacggccgcctcgacgtcgacatcggctaccgcggcgcgccgctcgggcgcgtcacctccggcggcgggcgcgtccgcgcgcgcgccgtctcctacatcgacgccaacctcagcctcgacggcataagcgtcgtggaggacgcgatctacctcctcgaggacctcgcgcggggatccgtgcccttcgacaccgtcgctgaggtcgagggccacgttcacttgttcttcctcagcatccctgtcaaggtcagcgccgatgaaacctttctcgttgattgcttttgttgtggattgcaaatatcgtgacttagtttatacaatccaaattggtatcgctgctctagtgttcattcttcaaacgccctaattttatcggattagcaggaaggatgtgacacgatgattggaattttttttgttccaaacaaaggcctgatcagtgatcacttgtcatcatctagtcggttcacctttcatctagaggctaatgtcccttattgtggccagtgcaacacaaattctgattctatgaggaaagctgattttttgtcaacttgattgtttattactcaggatctattcgccaaaagactacgtctagatagctttcatgatttccaaaatatggttcagatgttcaaagttttttgtttccaaatactcctggttataatatttgatgtttaggacaagatttgattaaacttttgaaactttgacccgatatagtgtctcaaatgcttagtttttttaaaaaaaacatggtgtgtgtagatttgccttgaaaagtactaatgtaatgtcataaacatattagatctctgtacttattctaatataaaattgatgggcccaaatatcaaaagtttaaccaaattttgtcctaaatgtcaaatactcctatttatgactataaggaacatactcttgtttccaaagtcaggaatcatgatttttactacagtataatatctttttttttgttaagatattcatataatgcatcttatatactatcatgtttctataagattttgattcaggacttcaatgtgttactatatgagtgtgtgggcattgaaaaacaacgccttatcatcatttgtttacttctttaataaaattttaaaaagggagcaacatctgcctagcattatgatgtttacttttatgttttctgatcataattccctaactgaaaatgttaatcctgctgaaaactgtcagcatatccatgaagaaattaaatataaggcaaaaaaatatttttaactttagttatgaagaataaatgttagcaatttataatacttagtatcttgtgctttcagccggttatcacatgaaaaagattataccgatggctctagatgaaatgtgtattctttgctatttaatgtcttgtgtttacggcagattataatctacttttgtcttgaccttgatctcgtattacttgctaaagaggtataccaaattgattatcactaatgaaaattttgctctagaaaagaaaccgaattattatatttattacttgggtgcattcaagtccacctccaaaatcatgagttgaaacttgaaaggtttggttttctgaaaatagttgatttgccgaaggatatatcacacactttcttttcacaactctggtaacatttgggaataggattggttcagggactttcaggtatgcttctggggttgacagatatagcagaaccacaaatcatgatgtattaaaacgttttcttttttggatattttactgtgctcgagcaatttctgccagcatgtgctgcatcggagttggcattacaaaactttaacatttcagtaggcatcatttgatttttgtgtaccaccacagaacctcattatttaaccattccattgccaagaatttctcttatccaatggataatatataattcctgtcaaggtagcatacgccaagaaattttacatttgcccagtattttgtctaggactctctcttgaacttctatatattgggcctagaacccccttatcgaatacatctgcagatctgctattcataacaattcccaacaccttgccttctccatggagacttcggcaattttttccctaagccactaatctatggccttaccccagcatgattgtctaccaaaacactttttgatattttcaccaagtctcatatcagctttttgcatgcttttacagccacttctgatctttcttcttgcatataaagtgatttttgctgcttgtgaagcaaatttgttgatggattaaatatggactgccattcgtagttttgctacatgtcctaagaaatgttgatggatcaatggtaggctgactcttggttaggggtggatatttggttagactgaagaattcagtctcggtcttctgtcatctaaaactggagaccagatttcattgaaaataaatgcagagcaggcaattttgtctcggtcatgactgaaattttaggagactagaacaaatcaccccccccccccccccgccccaaaaaagcagatccaaaacaatcactcaaaacaaaaaatccctactcctggtattgcatttagatatagctgtttgggcatagagttatgatcagaagtggttttggcacgtatttcccctaagagaaatctaatttgaggattaaatggaaagtggtagacatgtaggcatgttggccatgcgatctgtgcgatggctattatttttgttggataagatgttgaccaatgcaaacattgaaaggttttgcagcagaaccttctggtagcagagtaaatcccacggttagccacgcagaaacattttcaaatatctttgtaaacagtattttctgatgctattagtcgacatgctgcctctgccttttacctgctaatttatcatgtcagggcatcatttagcagcatatggctgtatggatacatttctgggttgcaaaatttcaatatgaaaaaaaaggtccttttagaaaatatactttggtgatttcatttatctgatggtcacatgtgtttcatttccagccactgtaatttggtaagtgttttggatatgtgggggttatgccaataaaatgtattaatatcatctcatgtattggcgttctatgtgccatgaccaaataaggatttatttcaatatttttggtctcctgatagatttgttgcacaaaaaaatgactataacaacctaagccaaggtcttttgcctcctgacctttgggctactctaaatttcattggcaaaaatttcttttgacattatacaaagatgacacactgatatgatcacgtgatgtttacctttggtatggctataattacatattctcacctctgactgaacattagcagattagctgctgcttctacggagtatatacattggagacctttactagagaaaaggatgcccaacgttttgcattattggtgctctgctctctgtctgacccataaggactgaaccctttgtattgttgttgcaggggagaatatcttgtgtggtgcatattaacccgcacaatcaaactatagtacaccaagactgctatccggatgtaaatatctgctctctctgacgcataaaatatctgaatgcttattgtaaaattttcagaatctgaccagttgttttgtatcagtgagttgctaatggcgttctagcaatcgtcgcgtgtgaagaggtcattttaaacttcccttggagtgctttcagctgttgtataaatatgatccatttggttatgtaccatggttgtgcacttgaggcaaaacattctttatcttgcactacgctggtagacgggtcgattgtaaatttcttagcaggcctaaataccatggttttaagtcatgtctatacgatcaatcagttacccaaagagaaaaaaattccacattggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0696000, RefSeq:Os03g0696000