Os03g0699300

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0699300| Description = Similar to Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP-- aspartate ligase) (AdSS) (AMPSase)| ...")
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Gene Name

Os03g0699300

Description

Similar to Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP-- aspartate ligase) (AdSS) (AMPSase)

Version

NM_001057522.1 GI:115454772 GeneID:4333815

Length

3462 bp

Definition

Oryza sativa Japonica Group Os03g0699300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28795933..28799394

Sequence Coding Region

28795974..28796267,28797772..28798464,28798543..28798854,28798994..28799164

Expression

GEO Profiles:Os03g0699300

Genome Context

<gbrowseImage1> name=NC_008396:28795933..28799394 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28795933..28799394 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccattctcccctccgtgcctggaccccgccgccgccgccgccgcctccctctccttcctccccgccgccgccgcgaggccaccggcgccatgcgcggtggcgccgcgctcgcgccgggcgctgagggtggcggcatccgtggccacggccccggagtcggcggccgcgcaggggcggctggagtcgctgagccaggtggccggggtgctgggcacgcagtggggcgacgaggggaagggaaagctcgtcgacatcctcgcgcagcgcttcgacatcgtcgcacgctgccagggtggagctaatgctgggcatactatatataattcagagggaaagaagttttcattacatcttgttccatcaggtatcctcaatgagaagacaatgtgtgtagttggtaatggagcagtagttcatcttcctgggttcttcaaagaaattgatgggttagaatcaaatggaatttcctgtgaaggaagaattttagtatcagatcgtgcccatcttttgtttgactttcatcaaactgttgacgggctcagagaggtagagcttggaaattcccttataggaacaacaaagaggggaattgggccatgctattcaaacaaagttataaggaatggacttagagtcagtgatctgcggcatatggatacatttggtgctaaactcaataccttgctgagagatgcagctctgcgctttgaaggatttgaatacagtaccaagacccttaaagaggaggttgagaagtacgaaaagtttgccgagcgtctaggaccttatattactgataccgtgcacttcatgaatcaatcaatcttgcagaataagaaaatattggttgaaggtggtcaagccaccatgttagacattgactttggtacttacccatttgttacttcctcgagtccctcagctggtggtatttgcactggccttggtattgctcctagaagtatcggtgatctcattggagtggtaaaagcttacacaaccagggtaggttctggcccattcccaacagagctgttgggtaagactggtgatttgctccgcgcttctggaatggagtttgggacaacgacaggtcgaccgaggcgctgtggctggcttgatatagttgcactcaagtactgctgccaaataaacggtttctcatctttaaatctgaccaaactcgacgtgttaactggcctcaaggaagtaaagctgggaattgcatattgtactgaagatggtaaagaaattgaatcattccctgcagaccttgatcttctggagaaaattaaggtcaaatatgaggttctacctgggtgggaggacgacatttcctctgtacgaaactacagcgatctcccagagactgctcgtttgtacgtggagaggatagaagagctggttggtatcccagtccattacatcggcgtaggaccagggcgtgatgctctcatatacaaatag</cdnaseq>

Protein Sequence

<aaseq>MPFSPPCLDPAAAAAASLSFLPAAAARPPAPCAVAPRSRRALRV AASVATAPESAAAQGRLESLSQVAGVLGTQWGDEGKGKLVDILAQRFDIVARCQGGAN AGHTIYNSEGKKFSLHLVPSGILNEKTMCVVGNGAVVHLPGFFKEIDGLESNGISCEG RILVSDRAHLLFDFHQTVDGLREVELGNSLIGTTKRGIGPCYSNKVIRNGLRVSDLRH MDTFGAKLNTLLRDAALRFEGFEYSTKTLKEEVEKYEKFAERLGPYITDTVHFMNQSI LQNKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRSIGDLIGVVKAYT TRVGSGPFPTELLGKTGDLLRASGMEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLN LTKLDVLTGLKEVKLGIAYCTEDGKEIESFPADLDLLEKIKVKYEVLPGWEDDISSVR NYSDLPETARLYVERIEELVGIPVHYIGVGPGRDALIYK</aaseq>

Gene Sequence

<dnaseqindica>42..335#1840..2532#2611..2922#3062..3232#agccgccattctctcctcgatttccctccaccgtcgccgccatgccattctcccctccgtgcctggaccccgccgccgccgccgccgcctccctctccttcctccccgccgccgccgcgaggccaccggcgccatgcgcggtggcgccgcgctcgcgccgggcgctgagggtggcggcatccgtggccacggccccggagtcggcggccgcgcaggggcggctggagtcgctgagccaggtggccggggtgctgggcacgcagtggggcgacgaggggaagggaaagctcgtcgacatcctcgcgcagcgcttcgacatcgtcgcacgctgccaggtcggtccgtctcgcgccgtcgcgcgcgcttcttttgctgggtggggctgtttggttcccagccacactttaccattacttgctaataaaagttgtcacaccttgtctaaggtgaggtgatcaaattgttagccacaacttactaagtctaagggaatctgaatcttgccacacttttttgagccattgacacgtgggacccaatttgttagaggggaatcttgccacaactgttgctacaaccaaacacctgtcaaatctgcctaaccttaggcgtggcaaactgtggcaaagtgtggcttgcaaccaaacacacccgctctctgctcctctttgctttgtcagtttgtccggaaggtgttcgattaattggttccttgtggtaggatagtacgagttctcacgttggcgctggtgagtttccagaggcgatcctttagctgagatgtactccctctgtccaaaaaaaccaacatagtaggatgtctcacgttccgtactaggttggtttttttctgacagaggggagtagtaatttgcgttagtttgctttatgatcgttacttgaagggtgtttatcttccggcgccatccacgcagactgcctttaccgtactactgtaagctactgctactttgtactcctttgatcgcaacactatcacagaaagtcgttttatacatgggaaattcaactctagcagaacaggagaaattccgtgttacgaaggaagcttagtagtccaaggctcccttccattttggttcttgcttggttttgatgataagtactgatatcagcatgggttgtacttgtaccattggtccccagttttcttgaattgtgtgaagcccttccgatctcaacgtattcttgatgagactcgagagccttgctgttttctcattcttgaatatatctttaatttttatgatgataatttttatggctgtatcatcattaacgaataaggatagctgaactattctaagcatcagtttaatatatctgcagaaagcattttgtctattcccaatttttctaaacccataaccacaatggatattccttctatatgttcatttttttaatgtcgaatccttcgtactaacaaaatagaattataaaacatcttaaaataccgataacccttccggttatctagtcgaggcagtaatgcagtattgataactaatggtgcatttcctttatggcaaggatattgccttttcactttacacaagcagttcttatgggttaaaaaaaatgattatcctgcttcatggaaaaccttgattacatagtgctcatttctcctactgttctctctgcacttgttgtattgactaatttttataggtttttgcacacctttatgaagttcagttttcttaaggtggcaataagactagacttagttttgtccaataggatttgatcatatatatatatatatatatatatatatattgttttaacttgtagaatgttttatgttattagggtggagctaatgctgggcatactatatataattcagagggaaagaagttttcattacatcttgttccatcaggtatcctcaatgagaagacaatgtgtgtagttggtaatggagcagtagttcatcttcctgggttcttcaaagaaattgatgggttagaatcaaatggaatttcctgtgaaggaagaattttagtatcagatcgtgcccatcttttgtttgactttcatcaaactgttgacgggctcagagaggtagagcttggaaattcccttataggaacaacaaagaggggaattgggccatgctattcaaacaaagttataaggaatggacttagagtcagtgatctgcggcatatggatacatttggtgctaaactcaataccttgctgagagatgcagctctgcgctttgaaggatttgaatacagtaccaagacccttaaagaggaggttgagaagtacgaaaagtttgccgagcgtctaggaccttatattactgataccgtgcacttcatgaatcaatcaatcttgcagaataagaaaatattggttgaaggtggtcaagccaccatgttagacattgactttggtacttacccatttgttacttcctcgagtccctcagctggtggtatttgcactggccttggtattgctcctagaagtatcggtgatctcattggagtggtcggtacagctatctttaaacttcttaacaatccatacttttcctctccctacaaaacttaatatttccatgtgcaggtaaaagcttacacaaccagggtaggttctggcccattcccaacagagctgttgggtaagactggtgatttgctccgcgcttctggaatggagtttgggacaacgacaggtcgaccgaggcgctgtggctggcttgatatagttgcactcaagtactgctgccaaataaacggtttctcatctttaaatctgaccaaactcgacgtgttaactggcctcaaggaagtaaagctgggaattgcatattgtactgaagatggtaaagaaattgaatcattccctgcagaccttgatcttctggagaaaattaaggtgaggaagagcagttgatcctgttccatttactcatattccatgccataattttacaggcagcatatgagagcactaaatcactcaatgtgactcttggtaattgatgaaaattcttatgttctctctgttggtataggtcaaatatgaggttctacctgggtgggaggacgacatttcctctgtacgaaactacagcgatctcccagagactgctcgtttgtacgtggagaggatagaagagctggttggtatcccagtccattacatcggcgtaggaccagggcgtgatgctctcatatacaaatagggggacttcaggaagcacgtatcctatcaaattcgttgtttagggcaataccaattttgttattccctaataagaaagacactggttgattggactgtataaaggcctggagggtgtaggaattccaaaatctttttttgccctaacaagattaaatacggtccccgctgctgtccaatggatattctttttctagctattgtcaatatattagtggaattttgagcacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0699300, RefSeq:Os03g0699300