Os03g0699400

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0699400| Description = Silencing group B protein| Version = NM_001057523.1 GI:115454774 GeneID:4333816| Length = 2959 bp| Definition = Ory...")
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Gene Name

Os03g0699400

Description

Silencing group B protein

Version

NM_001057523.1 GI:115454774 GeneID:4333816

Length

2959 bp

Definition

Oryza sativa Japonica Group Os03g0699400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28799850..28802808

Sequence Coding Region

28800042..28800133,28800229..28800289,28800548..28800617,28801633..28801765,28802394..28802484
,28802563..28802640

Expression

GEO Profiles:Os03g0699400

Genome Context

<gbrowseImage1> name=NC_008396:28799850..28802808 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28799850..28802808 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaccatccgccggttctgctgcgacgacctcctccgcttctcctccgtcaacctcgaccacctcaccgagaccttcaacatgtccttctacatgacgtacatggctcgctggcccgactacttccacgccgccgtcagccccggggaccgcgtcatgggatacatcatgggtaaggttgaaggacaaggtgaatcttggcatggacatgttacagcagtgtctgttgccacagaatttcggaggcagaagctagccaaaaaacttatgaaccttttggaggaaatcagtgacaagatggataaggcctactttgtggatctcttcgtaagagcatctaacatgccagcaataaggatgtatgaaaagcttggctatgtggtttatcgaagggtgctccgctattactcaggggaagaagatggccttgatatgaggaaagctttgtcacaagacgttgaaaagaagtccatcataccactgaagagaccaataacaccggatgaacttgaatatgattga</cdnaseq>

Protein Sequence

<aaseq>MTTIRRFCCDDLLRFSSVNLDHLTETFNMSFYMTYMARWPDYFH AAVSPGDRVMGYIMGKVEGQGESWHGHVTAVSVATEFRRQKLAKKLMNLLEEISDKMD KAYFVDLFVRASNMPAIRMYEKLGYVVYRRVLRYYSGEEDGLDMRKALSQDVEKKSII PLKRPITPDELEYD</aaseq>

Gene Sequence

<dnaseqindica>2676..2767#2520..2580#2192..2261#1044..1176#325..415#169..246#attaggcccggaggagcgcctatctgaagtccaacacccgtccaggcaccggctctccgccgctcgaagcttctctcttctcaccggaatctcgagagcacagcgccgccccgacgacgagatccctcaccggcgccgccgccgccgcggccaggaggccgaggggccatgacgaccatccgccggttctgctgcgacgacctcctccgcttctcctccgtcaacctcgaccacctcaccgagaccgtgcgtccgccctaaaccctcgccgtctcctttttcttctcttgatttcgagcttacccgtcggtatgctcgtcgcagttcaacatgtccttctacatgacgtacatggctcgctggcccgactacttccacgccgccgtcagccccggggaccgcgtcatgggatacagtacgtgttcttgcccttgggggcggctgggtctgtgctagctgttgctagtgattctgcgtctttgtttgtcagattcgctgaaattgtagagtaaaccctgcatttcctctggaaaacatgagaatttagggatcttttgggcgttacagtgcccgattggaatgtggttcgcaggaaatttatgatttgtggaggttccagtggagtctaatgtaatcttggtagtactatttatttgccgattaggacttattatttgcctctttgggaagggtggaacactatgacctgaattgggagcaggcgagcatgttgttcatagtagtgttaagagtaacccttttagtgctgaatgcagtattctatagtggagtattgagatgattcacctgtctgaatagatgagcactgtgcaatattctagtggatatgtataatttttaaaatttatatattttccaagtaatacaaagttcacctgcaaaaggctatggggtcagttgaccccaaatctgcatttccaccattgtgtaatgttatgtctgcaatatttcttcctcctccacattctcctagtttagtttatgtctttgtggccattcatttatttggatgtctgttgcagtcatgggtaaggttgaaggacaaggtgaatcttggcatggacatgttacagcagtgtctgttgccacagaatttcggaggcagaagctagccaaaaaacttatgaaccttttggaggaaatcagtgacaagatgtaagtatctcaactatgactatccctatgattgaaccttcacgccgatttggtgattgtaaactatactgactattattgaattttgtgcttattgtgcataaacaactgttcatttgatatatcatgttcttcaatcattcattttctgaattccttagcaatacagtatttaatctcattgtacttttgtatctgcatgatatcaatattggttgaaacttatatattgtcattctagctttgctaagatcaaggaacttatccctgtttaatgagcttagttcaagtttaaggtcctcttgtatcctgtggtctgtggggctgatgactgaccatgtgagctgtagtagttctgctgttaattgatataggccataattgtccttgcacaagtattaaggaggtgataaaattccccgcaaaaaaaaaaaggaggtgataaaattgagaatgcttactaggaatttagttctgttatgtaccatctcatgattgtttttggaggatgagggaatacttagtagtttgtatgggttttaacgaaagctgcatactgaggaaagataataagcaggggcatggttgggaagctcattccatcgacatgcaggcattataaaatcagaaaatatctcaaatatataccttaaattttcaattgaggactgattatcatatcagattatcagctatgatcataagcattgcaagctagaaattgtagtatggtaagacggtaatgtattactgttctggcctactagttctgtgaacaatttccattcagtaggattctgtagagtttaactgggtatttccttccactaagcacataccttagataaagaattggattcttgaattaaaaatatcagcctgttccattgctctattgtggtatacttgtttttgctaatgtcccatttatttcgactttatgattccataactgttgttgtcatgttatttattatagattctaatattacgctaaaaatggttatcctttcagggataaggcctactttgtggatctcttcgtaagagcatctaacatgccagcaataaggatgtatgaaaaggtaagcttcatacaaatttcatgatcatctagcactctaactcactgatttatatgattacacatttatatatgaatactgaataacaaacgcttgatctttcaaactagtttcttctactgcccctaaacagaattgttttagtgaaaaaaaaaatcatgtatgaaggtttcagcatagagtttattcttgaaaatttgaatccaaaatgacattatttctagtgagcttatcaaattatgttcctggtttccatagcttggctatgtggtttatcgaagggtgctccgctattactcaggggaagaagatggccttggtaagcacttccacagtgccaaatcatcactttgtgtcatattcaaattcattgttctaatggcgttgctcacttctgtccttgtttttgcttagatatgaggaaagctttgtcacaagacgttgaaaagaagtccatcataccactgaagagaccaataacaccggatgaacttgaatatgattgaagttaacttctagttacttccagtgttttgtttgctgttaacttctatggtgatttgccaagtgtcttttgtctccagtagtatcatctagtgatcgtgctgttttcttttctgcatcctgataagattcaacataactctgaaggtgattctatcgttttggaatggaatgcagcacttagtaagtagtct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0699400, RefSeq:Os03g0699400