Os03g0699700

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0699700| Description = 9-lipoxigenase| Version = NM_001057525.1 GI:115454778 GeneID:4333818| Length = 4125 bp| Definition = Oryza sativa J...")
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Gene Name

Os03g0699700

Description

9-lipoxigenase

Version

NM_001057525.1 GI:115454778 GeneID:4333818

Length

4125 bp

Definition

Oryza sativa Japonica Group Os03g0699700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28810037..28814161

Sequence Coding Region

28810103..28810289,28810468..28810760,28811202..28811439,28811541..28811876,28811962..28812047
,28812144..28812251,28812344..28812651,28812731..28812994,28813076..28813847

Expression

GEO Profiles:Os03g0699700

Genome Context

<gbrowseImage1> name=NC_008396:28810037..28814161 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28810037..28814161 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgggagggctcaaggacaagctgacagggaaaaatggaaataagatcaaaggcttggctgtgctgatgagccgaaaattactggatccaagggacttcactgcctcgctcctcgacaacgtccatgaggtctttggaaacagcatcacctgccagcttgtcagcgccactgttgccgaccaaaacaatgagggcagggggatagttggatcagaggcgaatctggagcaggggttgacagatttaccatcggtatcacaaggggagtccaagctcacagtgaggttcaactgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctccatgatgtccctggctgtgacactattgtgtttgttgccaactcctggatctaccctgttggaaagtaccactacaatcgtatcttctttgcaaacaattcttaccttcccagccaaatgccagaagcactgaggccataccgtgaagacgagctgaggtacctcagaggggaggacaggcaagggccgtatcaagagcatgaccgcatctaccggtacgatgtttacaatgacctcggtgaaccagacagggacaacccacgccctgtcctaggtggctcgcagaagcacccctacccgcgtcgtggccgtactggccgaattccgaccaaaaaagacccaaactcggagagcagattatcactgctggaacaaatttacgtgccaagcgatgagcgcttcgcgcacctcaagatgtcagactttgctgggtactcgatcaaggcaattgttcagggcatcttgcctgccattcgcacatatgttgatctcacacctggtgaatttgactcgttcgaggacatcttgaagctctacaggggaggcctgaagcttcccagcatcccagcactagaggagctgcgcaagagcttccctgtccaacttatcaaggacctgcttccggttggaggcagctacctgctcaagttccccaaacctgatatcatcaaagagaacgaggttgcttggaggacagatgaggaatttgcacgagagattcttgctggtctgaatcccatggtcatcaggcgtctcacggaattcccaccaaaaagtactcttgatcctagcaagtacggtgaccagactagcacaatcaccccagctcacattgagaagaacctcgaaggcctcagcgtgcaacaggcactggatagcaacaggctctacattctggatcatcatgatcatttcatgccattcctcattgacattaacagccttgatggtatcttcacctatgccacaaggaccctgttgttcttacgtgatgatgataccctgaagccactagcaattgaactgagcttgccacacatcgagggcaacctaacatctgcaaagagcaaggtccatacacctgcatcaagtggcattgagtcttgggtgtggcagctggccaaggcttatgttgctgttaatgactccggttggcaccagcttatcagccactggctcaacacacatgctgtgatggagcccttcgtgatcgctacaaaccgccagctcagtgtgacacaccctgtgtacaagctcctccagccacactatcgcgacacgatgacaatcaatgcattggcacgccagacactcatcaacggcggtggcattttcgaacaaactgtctttcctggcaaacatgctctggcaatgtcttcagcagtttacaagaactggaacttcacggaacagggccttccggatgatctaataaagagaggcattgccatcaaggacccatcaagcccatccaaggtgaagctactgatcaaggactacccttatgcaacagatggcctggcgatctggcaagcaatcgagcagtgggtcactgagtactgtgccatctactacccaaacgatggtgtcctccagggagatgtggagctgcaagcatggtggaaggaggtgcgggaagtcgggcatggtgatctcaaggacgcggactggtggcccaagatgcagagcttgcctgagctcaccaaggcctgcaccacaatcatctggattgcatcagcactccacgcagccgtcaatttcgggcagtacccatacgcgggctatcttccaaaccgtccgaccataagccggcggccgatgcccgagccgggttccaaggagtacacagagctggacgagaacccagagaagttcttcatccgcaccatcaccagccaattccaaaccattctcggtgtctcgctcattgagattctatcaaagcactcagcggatgagatctatcttgggcagcgtgacacgccagagtggacatcagaccccaaggcactggaagcattcaagaggttcagcaggcagctggtggagattgagagcaaagtgttgaacatgaacaaggaccccctgctcaagaaccgggtcggtccagccaatttcccctacacactgatgttccccaacacgtcagacaataagggggcggctgaggggatcactgccaggggcatccccaatagcatctcaatatga</cdnaseq>

Protein Sequence

<aaseq>MLGGLKDKLTGKNGNKIKGLAVLMSRKLLDPRDFTASLLDNVHE VFGNSITCQLVSATVADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMD KHGVPGAIIIKNHHSTKFFLKTITLHDVPGCDTIVFVANSWIYPVGKYHYNRIFFANN SYLPSQMPEALRPYREDELRYLRGEDRQGPYQEHDRIYRYDVYNDLGEPDRDNPRPVL GGSQKHPYPRRGRTGRIPTKKDPNSESRLSLLEQIYVPSDERFAHLKMSDFAGYSIKA IVQGILPAIRTYVDLTPGEFDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLL PVGGSYLLKFPKPDIIKENEVAWRTDEEFAREILAGLNPMVIRRLTEFPPKSTLDPSK YGDQTSTITPAHIEKNLEGLSVQQALDSNRLYILDHHDHFMPFLIDINSLDGIFTYAT RTLLFLRDDDTLKPLAIELSLPHIEGNLTSAKSKVHTPASSGIESWVWQLAKAYVAVN DSGWHQLISHWLNTHAVMEPFVIATNRQLSVTHPVYKLLQPHYRDTMTINALARQTLI NGGGIFEQTVFPGKHALAMSSAVYKNWNFTEQGLPDDLIKRGIAIKDPSSPSKVKLLI KDYPYATDGLAIWQAIEQWVTEYCAIYYPNDGVLQGDVELQAWWKEVREVGHGDLKDA DWWPKMQSLPELTKACTTIIWIASALHAAVNFGQYPYAGYLPNRPTISRRPMPEPGSK EYTELDENPEKFFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKAL EAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARG IPNSISI</aaseq>

Gene Sequence

<dnaseqindica>67..253#432..724#1166..1403#1505..1840#1926..2011#2108..2215#2308..2615#2695..2958#3040..3811#gcaacggcaacatacacacaccaccaccaacatagcttcttttgtcactgactacagtatcacagaatgctgggagggctcaaggacaagctgacagggaaaaatggaaataagatcaaaggcttggctgtgctgatgagccgaaaattactggatccaagggacttcactgcctcgctcctcgacaacgtccatgaggtctttggaaacagcatcacctgccagcttgtcagcgccactgttgccgaccaaagtactgatctttctccatttcttcctcgcttactttgcatgagtttgtacatgtttgctatgtagaaagaatcaaggatcagtactcagtactcagcacagattgaacggaaacaaggtgaaaacggccagtgacacaaatgaagtgactaacctattgtcttatatgctatgtgcagacaatgagggcagggggatagttggatcagaggcgaatctggagcaggggttgacagatttaccatcggtatcacaaggggagtccaagctcacagtgaggttcaactgggagatggacaagcatggtgtgccaggggccatcatcatcaagaaccaccacagtaccaagttcttcctcaagaccatcaccctccatgatgtccctggctgtgacactattgtgtttgttgccaactcctggatctaccctgttggaaagtaccactacaatcgtatcttctttgcaaacaatgtaagtcaggagtgattagcaagtctaaataccacaacgcctccctttctgttcttggcagatcttcttatcctgtttaaggttatcgtgagtaatttaacatcttgtaagtgcatagtttaaacgatagtgaatgactatattatatttaattaatcatcgatcatatacttagtaaaaagttctgcaattaagctcctaaactacatgcagaacatccaaagtgaagtagtaatagggagcaacagtttctgtgaaatcacgaacaccaaaattaatgactagacacaaatggaaagtttgtggcaactgcaagagtgcatcagatgcatctattatgccaataattaagagaatgaagtctgtgatgcaaagtgaggacttctctagttctggaatctggatattaattcctacagttttatcttccattggatgcagtcttaccttcccagccaaatgccagaagcactgaggccataccgtgaagacgagctgaggtacctcagaggggaggacaggcaagggccgtatcaagagcatgaccgcatctaccggtacgatgtttacaatgacctcggtgaaccagacagggacaacccacgccctgtcctaggtggctcgcagaagcacccctacccgcgtcgtggccgtactggccgaattccgaccaaaaaaggtacagtgttcctcttggttctgtgcatctagagagcacttcttgacagacaagttcataaactagtaagatctaatttgcgtgaatatccatggctgcagacccaaactcggagagcagattatcactgctggaacaaatttacgtgccaagcgatgagcgcttcgcgcacctcaagatgtcagactttgctgggtactcgatcaaggcaattgttcagggcatcttgcctgccattcgcacatatgttgatctcacacctggtgaatttgactcgttcgaggacatcttgaagctctacaggggaggcctgaagcttcccagcatcccagcactagaggagctgcgcaagagcttccctgtccaacttatcaaggacctgcttccggttggaggcagctacctgctcaagttccccaaacctgatatcatcaaaggtaccatgatttagccattgtgtcaattgccatagtcgatgagcagtggacaattagcgaactgttgtactatgcattgttgcagagaacgaggttgcttggaggacagatgaggaatttgcacgagagattcttgctggtctgaatcccatggtcatcaggcgtctcacggtgaactatccaacattacatagtctttgatgttttgtgctcctagcaagcatgaacaaaacaagctgatgctaatgtataattctctgttcataggaattcccaccaaaaagtactcttgatcctagcaagtacggtgaccagactagcacaatcaccccagctcacattgagaagaacctcgaaggcctcagcgtgcaacaggttaggcagtgatccatttcatttacagtgcaatcgatagtcatttgacaaactgccaaagttgatttgttgtcaattatggctctgcacaggcactggatagcaacaggctctacattctggatcatcatgatcatttcatgccattcctcattgacattaacagccttgatggtatcttcacctatgccacaaggaccctgttgttcttacgtgatgatgataccctgaagccactagcaattgaactgagcttgccacacatcgagggcaacctaacatctgcaaagagcaaggtccatacacctgcatcaagtggcattgagtcttgggtgtggcagctggccaaggcttatgttgctgttaatgactccggttggcaccagcttatcagccactggtacgtactggcagtggcaaactgtagttctttcctgaaagcagtaagctaacctcatcattgatgtaaactcttgtaggctcaacacacatgctgtgatggagcccttcgtgatcgctacaaaccgccagctcagtgtgacacaccctgtgtacaagctcctccagccacactatcgcgacacgatgacaatcaatgcattggcacgccagacactcatcaacggcggtggcattttcgaacaaactgtctttcctggcaaacatgctctggcaatgtcttcagcagtttacaagaactggaacttcacggaacagggccttccggatgatctaataaagaggtaattaaacaccgagagccacatcacaacaagaaccaacaataacataactttgaataacatcctaattttgtaatgcagaggcattgccatcaaggacccatcaagcccatccaaggtgaagctactgatcaaggactacccttatgcaacagatggcctggcgatctggcaagcaatcgagcagtgggtcactgagtactgtgccatctactacccaaacgatggtgtcctccagggagatgtggagctgcaagcatggtggaaggaggtgcgggaagtcgggcatggtgatctcaaggacgcggactggtggcccaagatgcagagcttgcctgagctcaccaaggcctgcaccacaatcatctggattgcatcagcactccacgcagccgtcaatttcgggcagtacccatacgcgggctatcttccaaaccgtccgaccataagccggcggccgatgcccgagccgggttccaaggagtacacagagctggacgagaacccagagaagttcttcatccgcaccatcaccagccaattccaaaccattctcggtgtctcgctcattgagattctatcaaagcactcagcggatgagatctatcttgggcagcgtgacacgccagagtggacatcagaccccaaggcactggaagcattcaagaggttcagcaggcagctggtggagattgagagcaaagtgttgaacatgaacaaggaccccctgctcaagaaccgggtcggtccagccaatttcccctacacactgatgttccccaacacgtcagacaataagggggcggctgaggggatcactgccaggggcatccccaatagcatctcaatatgagactgctgcacgcgtcacgcgctgctgagttggtgtaggtttgtggctgttatcttaggccctagggcacaagcaatgaagctgcatagtactatttgctacaaattatgcaagaataaagttttagtgctaataataaagttactgttgtagtgtttgtcccatttttaagcagcttcacatagcaagctcaaatgaagaggcaatgctgcaatatggatgattaattatgcagctttactcctatgatgttagggaggcagcttctgtggtcaaatttgcagcaataaaattcttcaaatttcctcaaatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0699700, RefSeq:Os03g0699700