Os03g0701200

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Revision as of 12:54, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0701200| Description = Similar to Sugar-starvation induced protein (Fragment)| Version = NM_001057534.1 GI:115454796 GeneID:4333827| Length...")
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Gene Name

Os03g0701200

Description

Similar to Sugar-starvation induced protein (Fragment)

Version

NM_001057534.1 GI:115454796 GeneID:4333827

Length

3158 bp

Definition

Oryza sativa Japonica Group Os03g0701200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:28903528..28906685

Sequence Coding Region

28903614..28903662,28903781..28903944,28904076..28904113,28904252..28904339,28904429..28904653
,28905176..28905241,28906255..28906455

Expression

GEO Profiles:Os03g0701200

Genome Context

<gbrowseImage1> name=NC_008396:28903528..28906685 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:28903528..28906685 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccaccgccgccgcttcctcccctttcgactgcgtcctctttgacctcgacgacacgctgtacccgggaagcgcgggcatcgggctggcgacgaagcgcaacatcgacgagttcctcatggcacggtgcggcgtcacggcggagcgggccgccgcgctccgcgtcgagctcttccgctcctacggcagctcgctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcggagcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgaggcgccgtgcgcctccggcgatgaccgccccggcgtgatcctcaaaccgtcccccgatgccatcgtcgcggctctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagcaaggaggccgactacgctcttgagagcatcggcagcctccggcgagccatcccggagatttggggcggcgtcgccgtcgccgtcgccggcgaacagctcgaccacggcgccgcggagaagacgaagggaatgaggtccgatctggactccatcatccagccaacgtcagtcctggcgtaa</cdnaseq>

Protein Sequence

<aaseq>MASTAAASSPFDCVLFDLDDTLYPGSAGIGLATKRNIDEFLMAR CGVTAERAAALRVELFRSYGSSLAGLIALGYDVHPDEYHSYVHGRLPYDRIAADPQLA GLLRSIPQRKILFTNSDRAHMRKALQRLSVDEGCFDAVVCFETMNPHLFGEAPCASGD DRPGVILKPSPDAIVAALRIAGTNPHRTLFLDDSERNIAAGKALSLRTVLVGKRVRSK EADYALESIGSLRRAIPEIWGGVAVAVAGEQLDHGAAEKTKGMRSDLDSIIQPTSVLA </aaseq>

Gene Sequence

<dnaseqindica>87..135#254..417#549..586#725..812#902..1126#1649..1714#2728..2928#tcccctccttctccccgcgttacaatcagcacacgctctctgctagtctgatcgctctcgccatcgcacctctgtctcgtcgaacaatggcctccaccgccgccgcttcctcccctttcgactgcgtcctctttggtaaccacgtttgtctctcgattctaggctcctctcatagcgtgatcactttcaattctccgtctaaactctgcctttcccgggctgttttttttttctttctttcttttctatgaagacctcgacgacacgctgtacccgggaagcgcgggcatcgggctggcgacgaagcgcaacatcgacgagttcctcatggcacggtgcggcgtcacggcggagcgggccgccgcgctccgcgtcgagctcttccgctcctacggcagctcgctcgccggcctcatcgtacgtccaattcccaatccccccacgcacgcacgcacggcacactcgaacaatccaaattcgcctctgttttcgtcctctgtttccgtttctaactttggctttcggatttgggtttccgcgcggcaaaggctctcggctatgacgtgcacccggatgagtaccacaggtcagcacaacacatcacatcacttacctttgcagctttgcttaaccaattcgacaagccaattagtaattattaagcggctaattttctgtctaatccgaatgctgacgctgcttggttgatcgattatcgtcgcagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcggagcatcccgcagcgcaaaattgtaagctcacgcatcctctttttttcctgtgaaattcctgtggttttccggacttaattggaggcagctaattcgtgttcgtgtttcagctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgaggcgccgtgcgcctccggcgatgaccgccccggcgtgatcctcaaaccgtcccccgatgccatcgtcgcggctctgcgcatcgccggcaccaatccacaccggacggtaagccaccacaccctgctcgacatttttcagtaggattttttggagcttgttgcaatgtaaatgtagttaaccatatgggcaattttatcattcttaaaaatatactgggaagtaactcattttctggtgaaaagtttagtatctccagtcgatataggtaactcgaagtaccaaattttttttatctaaccatgtacatttaacagcaggtctatcctctaatgataccgttaatttacaaacccaaaatgtattaatcactcttccatttttcttatcacaacaaggaaatagaatgtctatggaccaaagagtgtattatgcatcttggaaagtgacatcgagtgtaaacccaaaaggcttagaaagtaacgagtagtaatagggtctttgtcagcgtatccttttccatcgaaacaaacatatcgcacacatatggtatatgtgattttacgtgcttcgtttgtgctcttgtcaatgatcacgaagctagtaaataactcgttcttgctctgtcagctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcaccgtcctggtaattaaccaccacaacttaattgtgtgtttcagttttcttcgtaccgcactgttggtttaagctactataaccaagtgacagtattttccttgttttgaaatctgaatctttttctccactaccataaaatccttactagctccaaacgggacatagatgtgttcaaaacacagtaaaattaatttcaccaaaaatttacatgattggtagatatcgattcaattcctatagtaattatcgggaaaaatacacaaaaatcaatgaggcatataagttgctgtctctgcctgtccatttgtcgatgggttggtcgatcaggtggccggtgcacacagcgtccctgcagctgatgcatcgctgatggtgttggccttgtcggattagaaaagcatatatcccaatttcttcattgccgtgatgccaagagtttggtttatgcactcaaactgtgtgtgcattattggttaatcctgcttttgcacatggacgcttagtcacataatttagtgctctcgcatttgtggctggcaccaaattggccatgtcgtcgacacggctctggtcggtgtgattgatatatctggcatatatgatcccccatgattggttgaacaaattgcctcttgatactacttgagcagggaaaatttataattttaaatatagagactttttaaatatatggtttcgatgtgttctttgctggattcggtttcaacaaccaatttctaaaaagaaaaatagcacttatatatagtcctttcctactagtacaacaaaagctagtgaaaaataatggcaaaaaaacaggagacacacacaaaaaatctcctctgccagtgtacagccgttaacccatcgcatcgatgaacagtatccatgacgtgccaacgtttgataacaggggccatagcccattgagacccaactaatttgcatactttgcggctaagtttcctgcatgaacacgaatttacgttagctaattaatcttctcaattaatattcaggttggcaagagggtgaggagcaaggaggccgactacgctcttgagagcatcggcagcctccggcgagccatcccggagatttggggcggcgtcgccgtcgccgtcgccggcgaacagctcgaccacggcgccgcggagaagacgaagggaatgaggtccgatctggactccatcatccagccaacgtcagtcctggcgtaatcggttcctaatccattcgcacataaacaaatcgccactaataaaagcaagtactgtccattaattatcatgtaaattattctgattcctgatgctgagtgcgtgtgcagtgtatttgtatatgggcctggctgacaaggaaatatgcatgtgtatatcagttctgatgatcagcttttgtttgctgtaaaatgtaaatggcactatgagcaaggaatttgtctttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0701200, RefSeq:Os03g0701200