Os10g0343400

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Revision as of 08:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0343400| Description = Cellulose synthase family protein| Version = NM_001070925.1 GI:115481593 GeneID:4348365| Length = 7218 bp| Definiti...")
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Gene Name

Os10g0343400

Description

Cellulose synthase family protein

Version

NM_001070925.1 GI:115481593 GeneID:4348365

Length

7218 bp

Definition

Oryza sativa Japonica Group Os10g0343400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10437487..10444704

Sequence Coding Region

10437685..10439998,10444488..10444666

Expression

GEO Profiles:Os10g0343400

Genome Context

<gbrowseImage1> name=NC_008403:10437487..10444704 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10437487..10444704 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgtcagcaggcttggccactgagagcttgccggcggcgacatgcccggccaagaaggatgcctatgccgcggcggcgtcgccggagtccgagacgaagctggccgccggcgacgagagggcgccgctcgtccggacgactcgcatctcgacaactaccatcaagttatacaggctcaccatctttgttcgcatcgccatcttcgtgctcttcttcaagtggagaatcacctacgctgctcgcgccatcagctccaccgacgccggcggcatcggcatgagcaaggcggcgacattttggacggcgtccatcgccggcgagctctggttcgcgttcatgtgggtgctcgaccagctgcccaagacgatgcccgtccggcgcgccgtcgacgtcacggcgctgaacgacgacacgctgctcccggcgatggacgtgttcgtcaccaccgccgaccccgacaaggagccgccgctcgccacggcgaacaccgtgctgtccatcctcgccgcgggctaccccgccggcaaggtgacgtgctacgtctccgacgacgccggcgcggaggtgacacgcggggcggtcgtggaggcggcccggttcgcggcactgtgggtgcccttctgccggaagcacggcgtcgagccgaggaacccggaggcgtacttcaacggcggcgagggtggcggtggtggcggcaaggcgagggtggtggcgagggggagctacaaggggagggcgtggccggagctggtgcgcgacaggaggcgggtgcgccgcgagtacgaggagatgcggctgcggatcgacgcgctgcaggccgccgacgcgcgccgccggcgctgcggcgcggccgatgaccacgccggagttgtgcaggtactgatcgattctgctgggagcgcgccacagctcggcgtcgcggacgggagcaagctcatcgacctcgcctccgtcgacgtgcgcctcccggcgcttgtgtacgtgtgccgcgagaagcgccgcggccgcgcacaccaccggaaggccggcgccatgaacgcgctgctgcgcgcatccgccgtgctctcgaacgcgcccttcatcctcaacctcgactgcgaccactatgtcaacaactcgcaggccctccgcgccggcatttgcttcatgatcgaacgccgcggcggcggcgccgaagacgccggcgatgtcgcgttcgtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaaccgcgtcttcttcgactgtaccgagcttggcctcgacggcctccagggccccatctacgtcggcaccggctgcttgttccgccgcgtcgcgctctacggcgtcgacccaccgcgctggagatcgcccggcggcggtgtcgccgcggaccctgccaagttcggcgagtcggcgccgttcctagcctccgttcgggcggagcagagtcacagtcgcgacgacggcgacgccattgccgaggcgagtgcgctcgtgtcgtgcgcgtacgaggacgggacggcgtggggcagggacgtcggctgggtgtacggcaccgtgacggaggacgtggccacgggcttctgcatgcaccggcgagggtggcgctccgcctactacgccgccgcgcccgacgcgttccgcggcacggcgccgatcaacctcgccgaccgcctccaccaggtgctccgctgggcggcgggctccctcgagatcttcttctcccgcaacaacgcactcctcgccggcggccgccgccgcctccacccgctgcagcgcgccgcctacctcaacacgacggtgtacccgttcacgtcgctcttcctcatggcctactgcctcttcccggcgatcccgctcatcgccggcggcggcggctggaacgccgcgccgacaccgacgtacgtcgcgttcctggcggcgctgatggtgacgctcgcggcggtggccgtgctggagacgaggtggtcggggatcgcgctgggtgagtggtggcggaacgagcagttctggatggtgtccgcgacgagcgcgtacctcgccgcggtggcgcaggtggcgctcaaggtcgcgacggggaaggaaatatcgttcaagctgacctcgaagcatctcgcgtcgtcggcgacgccggtcgccggtaaggataggcagtacgcggagctgtacgccgtgaggtggacggcgctgatggcgccgacggcggcggctctggcagtgaacgtggcgtcgatggcggcggcgggtggtggtggccggtggtggtggtgggacgctccgtcggcggcggcggcggcggcggcggcactcccggtggcgttcaacgtgtgggtggtggtgcatctctacccgttcgcgctcgggctgatgggtcgccggagcaaggcggtgcgccccattctgttcctgttcgccgtcgtcgcctacctcgccgtccgcttcctttgtctcttgttacaattccatacggcttaa</cdnaseq>

Protein Sequence

<aaseq>MPPSAGLATESLPAATCPAKKDAYAAAASPESETKLAAGDERAP LVRTTRISTTTIKLYRLTIFVRIAIFVLFFKWRITYAARAISSTDAGGIGMSKAATFW TASIAGELWFAFMWVLDQLPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPL ATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPR NPEAYFNGGEGGGGGGKARVVARGSYKGRAWPELVRDRRRVRREYEEMRLRIDALQAA DARRRRCGAADDHAGVVQVLIDSAGSAPQLGVADGSKLIDLASVDVRLPALVYVCREK RRGRAHHRKAGAMNALLRASAVLSNAPFILNLDCDHYVNNSQALRAGICFMIERRGGG AEDAGDVAFVQFPQRFDGVDPGDRYANHNRVFFDCTELGLDGLQGPIYVGTGCLFRRV ALYGVDPPRWRSPGGGVAADPAKFGESAPFLASVRAEQSHSRDDGDAIAEASALVSCA YEDGTAWGRDVGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLH QVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCLFPAI PLIAGGGGWNAAPTPTYVAFLAALMVTLAAVAVLETRWSGIALGEWWRNEQFWMVSAT SAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAGKDRQYAELYAVRWTALMAPT AAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAALPVAFNVWVVVHLYPFALGLMGR RSKAVRPILFLFAVVAYLAVRFLCLLLQFHTA</aaseq>

Gene Sequence

<dnaseqindica>4707..7020#39..217#gaatgcattaggaatatatttgaagctagagagagcacatgccgccgtcagcaggcttggccactgagagcttgccggcggcgacatgcccggccaagaaggatgcctatgccgcggcggcgtcgccggagtccgagacgaagctggccgccggcgacgagagggcgccgctcgtccggacgactcgcatctcgacaactaccatcaagttatacaggtgagggtatatatacatatatgagtgtaccatcaagttgtaggtgccttaaatttgtagtagtgcacctacgacacacgaatgttgtgtttcagatcatcatgtttatggtgaaccaaaaacttatacatatttatacaacttaattatatcttagcaaagtgctacgaaaaccaacaaataattaaagtggttgttttcggttcatgaactttggcctcgtctaaaaagaagtcctttaaaaaactagagaaattatgttcgtcgttggctgttttgagtatgattttgtgtgatgtggcgtttgtggtgatttcgacactattaacatatatattgatccaatctttgaaggtgctcgtagagttagatatgtgtcgtgtgtatgtatatgtttataagggttattatatatgtatctatataacctatagaattgatctcttagtgttattattacaattttcctctcatgtggtgcttccacatcaccttaattatatatctatgtccattagatccaaacttaacgtataacaaatcatcccaaagtcactctactattgaccattggatttattttggttggctcaaatttctcttagtgatacatgactcatcccgtacatttatttctccccattatgcacaaccatgcaaccctcaattaaccaagcaaacaatagactaccaaatgccatgcatgaagctaaacggtatggtaccaaatcatattctttttaattttgtgtacatatattcttaattaatgaacatatatcatatatagactagcatatacatttatggttgtctctaaattatattaaagaaaaatgaactatgcctatatagggcatgtctgtttcgatcacaagacaagacagttcaataatcgattattcacgctatcaacatatatactatcataatatcatctttgtttttctatatgtcaagttttttttataaattataatcttgtgtatttctattttgacttaagttatagctagcatttttatatatacccaatgccttctaaatttcttatcatgaaatttgcaaacaaaagttttataccaattcccgcagcagcgtgggggaatcatctagtttatatgagtgtcttcatcacgattgtgtttcattaataaaaattcataggcccgtttgctcaagctttttggttgagctgatcaatgaaatggaaaaaagtcattagcatataattaattaaatattttttaaatgattttttattttctaagaacttttatatggaaagttttttaatgcattatttagctgcttgttggcatgttgactatcctgagtcatccatggaccagcctcaccgttattaaggcccacttgtcaccacctctttctcccccctctctttgtctctcgttcacgcatgctgaggatttgatgagggtggtcggcgaggccaaaacgttagtggtagtagtgatggaactcttgggacgcgccaatactagaggtgtgcttctggagagggagtgggtggatgaggcactagaggacgagaggaggaaggggccagagagagcgggtgtactaggaggacctcatcctcaaggacattgcagccgtcgcctcctcctcacttacttacagctttcatgttcggttcagagagcacttttttagttgagaataaatcattcccttttatgtgaattccccagcggcgaattaacaatttgtgaggccctatctattcaatctctcgagccccaagaaaacccccctctccctcagactcaatctctcttttgcagtagatgccgaacctgctactcagtgggcgggcgcagcaactacatggacccctttatttatgttgttgccaatgctttcctgggccgagccggaattctttattagaacgtcggcaggcaaagtctgaaggaaggcagctatccccttggccttcttccttttcgatgaaaaacaaatcaacatctcaatatctctaaaagtccccttcatcgagccggaaaatctcccacccacccccacccccttcgtcgagcctttcctttagtggtaagggatatgcactttatctgaacgttggcaggcattccggaattctcctttttgggccccgggtgaacataggctcaaacatgattggagaggtcctagctacaccatgcgttcaataaaaaaaagcctttgggaagctgcagggattacaaaaagagggtgctttcctatgttgcactgaaaaaggacaaaggagaagacactcttcgactttatttcttcctcccgcgcccgcctaagcctggctcggcccacgttagaggggaatattagcaaagcggaaaaagacagagggagagggagctgcatcttattctcttcgcgagaacttcaggatcgaagaagcattcggaaggggcgaggccttcatttcgttggcagaagcagaaacgatccaatccatttggggcttcggggaacccaaaaacgaactctgtttacttttttcatagatagatgatatatataggaatactatatacatccctttactttagatttagatgtctatgtatctattttttaatcatctcccgattatctttttttttctagttcgtactgctctttctctctaaattgcatcaaagaaaatagagagagagagagagcagatagatcctatcccctataacgaatactcatttctatctattgatagaaaagaaagatcttcgtcacggacattgcctttgttctattttttttttagatttgaggaattcctcatatccaaggcagctccccacaaacaccctacccatacgactatgccctctcttgaatcgagagtagattgggcttcatagctactttcattctaaagacgaatattagtcaatacgcaggcttcttcttcttcttctgcaaccatcctcgtcctcccgcggccacaaacgttgaaaactattgttgccgccattgatgccatcccatgctccaccctcgtcgatctctctgtagtgagttttctcgtaaaacctactgtgtcacaacttgttcctcctagcttgtgtccgttaccctccataatggcggtgatcaatgtagtggttcaccatgaacttgagcttcctctcatgtacaactgtttgcttcttaccgtcgcgttttgcaccaacaagagcacctccacaatcactgtcttccctgttggattcatgcggccacaatctacttccacgacattttgccctcactggattcaatcgagtcaccatcgcgctatacgcctgcccgacaccatcatctaattcgctgccaccggccacccctctctctctaccacagtgcaggtgccctcctttcccccgccgctcaccgaccgaatgacagagttaagcctaaacaacttgttgctgttgattccctcacctcgatgatgtgttcttgttgcacgcaaagtgtttctagacatgcttgacagagaaaaaaaaagaagaatggatcccctatgttactaacatgtgggacccactgtattctttgctttttttttctaattataatgtcatgcaagttaaaatgtctcagggaggcaaagtgcactgctattaaaaattgatggcaactccaattctgggagttttgacaaatgttggatccttgcatttcagatcaatgagcgggtcactgacggactaagggcaaccacagtgtacatgaaaactaatcttatcaaataaagtagtaatttttgttatacttttatacattgggagatgagctaagaagagaatagtgctaagggtaaccttaagcttaaagctagaccataagaattaaaaaaaaataaggctttgtagcatgcatgtacacttcaattctgagtggatgaaggtttttttttcttagtgggcccatcttatagttatgaagagaccatatacattgtaatatgcattataaactaaagaatatagaaacgtgggtttcatcttgttgctctattaaatataaagcattgaggatgccctaaggctatgtttcatacttctatttcccaactcctactctctttttcttgagcaaactcttttcgaatttttgaattgttaaattgtgcttcttttataaaagttttcaatacgattgtctatttaacaaataattttaatctattatttttaaaaaaataaactaatatttaattaatcatagtctaattagctactccctccgttttacaatgtaagtctttctagcattgcccacacatatatagatgttaataaatctacacacatacatatgtctagattcattaacatttaaatgaatatggacaatgataaaaagttttacattgtgaaacggaggaagtacatcgttttcatgcagaagaaatgatcagttccgaacttggagtacgaactcaccgtaatcacatctattgacaatgcacttgtaggctcaccatctttgttcgcatcgccatcttcgtgctcttcttcaagtggagaatcacctacgctgctcgcgccatcagctccaccgacgccggcggcatcggcatgagcaaggcggcgacattttggacggcgtccatcgccggcgagctctggttcgcgttcatgtgggtgctcgaccagctgcccaagacgatgcccgtccggcgcgccgtcgacgtcacggcgctgaacgacgacacgctgctcccggcgatggacgtgttcgtcaccaccgccgaccccgacaaggagccgccgctcgccacggcgaacaccgtgctgtccatcctcgccgcgggctaccccgccggcaaggtgacgtgctacgtctccgacgacgccggcgcggaggtgacacgcggggcggtcgtggaggcggcccggttcgcggcactgtgggtgcccttctgccggaagcacggcgtcgagccgaggaacccggaggcgtacttcaacggcggcgagggtggcggtggtggcggcaaggcgagggtggtggcgagggggagctacaaggggagggcgtggccggagctggtgcgcgacaggaggcgggtgcgccgcgagtacgaggagatgcggctgcggatcgacgcgctgcaggccgccgacgcgcgccgccggcgctgcggcgcggccgatgaccacgccggagttgtgcaggtactgatcgattctgctgggagcgcgccacagctcggcgtcgcggacgggagcaagctcatcgacctcgcctccgtcgacgtgcgcctcccggcgcttgtgtacgtgtgccgcgagaagcgccgcggccgcgcacaccaccggaaggccggcgccatgaacgcgctgctgcgcgcatccgccgtgctctcgaacgcgcccttcatcctcaacctcgactgcgaccactatgtcaacaactcgcaggccctccgcgccggcatttgcttcatgatcgaacgccgcggcggcggcgccgaagacgccggcgatgtcgcgttcgtccagttcccgcagcggttcgacggcgtcgatcccggcgaccgctacgccaaccacaaccgcgtcttcttcgactgtaccgagcttggcctcgacggcctccagggccccatctacgtcggcaccggctgcttgttccgccgcgtcgcgctctacggcgtcgacccaccgcgctggagatcgcccggcggcggtgtcgccgcggaccctgccaagttcggcgagtcggcgccgttcctagcctccgttcgggcggagcagagtcacagtcgcgacgacggcgacgccattgccgaggcgagtgcgctcgtgtcgtgcgcgtacgaggacgggacggcgtggggcagggacgtcggctgggtgtacggcaccgtgacggaggacgtggccacgggcttctgcatgcaccggcgagggtggcgctccgcctactacgccgccgcgcccgacgcgttccgcggcacggcgccgatcaacctcgccgaccgcctccaccaggtgctccgctgggcggcgggctccctcgagatcttcttctcccgcaacaacgcactcctcgccggcggccgccgccgcctccacccgctgcagcgcgccgcctacctcaacacgacggtgtacccgttcacgtcgctcttcctcatggcctactgcctcttcccggcgatcccgctcatcgccggcggcggcggctggaacgccgcgccgacaccgacgtacgtcgcgttcctggcggcgctgatggtgacgctcgcggcggtggccgtgctggagacgaggtggtcggggatcgcgctgggtgagtggtggcggaacgagcagttctggatggtgtccgcgacgagcgcgtacctcgccgcggtggcgcaggtggcgctcaaggtcgcgacggggaaggaaatatcgttcaagctgacctcgaagcatctcgcgtcgtcggcgacgccggtcgccggtaaggataggcagtacgcggagctgtacgccgtgaggtggacggcgctgatggcgccgacggcggcggctctggcagtgaacgtggcgtcgatggcggcggcgggtggtggtggccggtggtggtggtgggacgctccgtcggcggcggcggcggcggcggcggcactcccggtggcgttcaacgtgtgggtggtggtgcatctctacccgttcgcgctcgggctgatgggtcgccggagcaaggcggtgcgccccattctgttcctgttcgccgtcgtcgcctacctcgccgtccgcttcctttgtctcttgttacaattccatacggcttaaaggcattcttaatttcgaccctacaattacagaattactacttttcactcactaggaattaagctggaattcacgaagctaaatggtatagatatttggggtgttacacttttaacccatgttgctcattgtttcttttctctatggtgttacaagatgttacgagcaagtttaatagtatagcaaactactagcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0343400, RefSeq:Os10g0343400