Os03g0708400

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Revision as of 12:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0708400| Description = Protein of unknown function DUF1295 family protein| Version = NM_001057571.1 GI:115454870 GeneID:4333864| Length = 3...")
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Gene Name

Os03g0708400

Description

Protein of unknown function DUF1295 family protein

Version

NM_001057571.1 GI:115454870 GeneID:4333864

Length

3699 bp

Definition

Oryza sativa Japonica Group Os03g0708400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29321536..29325234

Sequence Coding Region

29321619..29321669,29321816..29321885,29322021..29322088,29322791..29322852,29323525..29323606
,29323692..29323925,29324244..29324372,29324464..29324525,29324813..29324930

Expression

GEO Profiles:Os03g0708400

Genome Context

<gbrowseImage1> name=NC_008396:29321536..29325234 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29321536..29325234 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaaccgtgctggactcccacttcctggcgctcacggccatcgtcactgtgggatatcagctggtgttcttcatcatcaccgcgctcctgcggttcgataaagtcactgatttcgcaggaagtacgaatttcatcatacttgcaatcctcacgctagctttgaagggagcatggcatttccgtcaggttgtattgactgtgctcgttgtgatttggggtcttcgcttaggactattcttattaatgaggattcttcaatggggagaggacaaacggtttgatgaaatgcgcgataacttgggaaaactagcagttttctggattttccaggctgtttgggtatggactgtcagcttgcctgttacaattgtgaacgcaagtgacagcgatccctcaattgaagcccgtgatattattggttggatcatgtggctgatcggggcaggtatggaagcaatagctgatcagcagaagcttacgttcaagaattctccgagcaatcgtggaaggtggtgtaatgtgggtctttggagttatactcgccatccaaattactttggcgagatattcctttggtggggaatatttgtagcatctactccagttctctcaggagctgaatggctcgtgatcctcggacctgtattcctgacgctcttgcttctcttcgttagtggaatcccacttctggaggcttctgctgataagcgctttggacagaacgaagaataccgcacgtacaagaacactacaagtcctcttatcccactaccaccagctgtgtatggagccctgcctggatggttcaagatgggcttcctcttcgagctcccgctctacaatcgtgtaccgcaacgtgatcctgtcagctga</cdnaseq>

Protein Sequence

<aaseq>MGTVLDSHFLALTAIVTVGYQLVFFIITALLRFDKVTDFAGSTN FIILAILTLALKGAWHFRQVVLTVLVVIWGLRLGLFLLMRILQWGEDKRFDEMRDNLG KLAVFWIFQAVWVWTVSLPVTIVNASDSDPSIEARDIIGWIMWLIGAGMEAIADQQKL TFKNSPSNRGRWCNVGLWSYTRHPNYFGEIFLWWGIFVASTPVLSGAEWLVILGPVFL TLLLLFVSGIPLLEASADKRFGQNEEYRTYKNTTSPLIPLPPAVYGALPGWFKMGFLF ELPLYNRVPQRDPVS</aaseq>

Gene Sequence

<dnaseqindica>84..134#281..350#486..553#1256..1317#1990..2071#2157..2390#2709..2837#2929..2990#3278..3395#gagcccgattggcagtttggcaccagcaccagcagcaggagcagagacaggtgagaggaggaggataaacggaggaggccgcgatgggaaccgtgctggactcccacttcctggcgctcacggccatcgtcactgtgagcaaatccctcgtcttttcctcttcctctctctcgccggtgcggtgctcatggatgtggttggaggttccaggagacgtgattggtgttcttgggattttttttttaatttcttgttccaatttttgtggtggtggtggtaggtgggatatcagctggtgttcttcatcatcaccgcgctcctgcggttcgataaagtcactgatttcgcaggtaattttggcaattgtttgtgtacaacttttcatgggaaactgcttatattattcttgaatataagttctcctcaacaaggaaattgccttttaaatttttggtaatttctgttactgcgttgttgtcttacaggaagtacgaatttcatcatacttgcaatcctcacgctagctttgaagggagcatggcatttccgtcaggtaaatagttgtctgaagtaaaacgtgcccaccttgttattttcttgttgtaaacatggtcccaatgtcttctcagtcacagcagaatgaaagcaagctgttcatttgagaattaattctcattctgccttcggattattcattctttggacttgccatgattttgttgtttgttcggtttaggatgacataacatcattaatatgttgatgaattaggttgggaatggatgtttctgttgacagatactgtagaatttgcagcaatgttacctgtttatttcttcattgtctattattgagtaatactgttcatgaaacgggataaaaatgcctcacttataacaaaagtgcaaacctgcaaatggtaacatgcctataaaagaaaggatgaaaagaaaatgggtagattagtacgaaaattagtggcatgcatgtgtttttctgataaaatctaatatttccaggttgtagaaaaaaatactgcaaattaacctgaaaaaattcctttcaagtgattttgtttcaagcgatgttgcatcaaagagttaaagataacctcgttccattttacatggaaatctaccgacggatagtagctttagccaactctacagtccatttgtttgtatattcttttataattgtaacaatacatgctttttttaatttgtggatttcttaactttcatccctttatcaggttgtattgactgtgctcgttgtgatttggggtcttcgcttaggactattcttattaatgaggtatattattataaaacagcaaagtttgttcaaatatgaaatgcattactaaactttctactatcttaaatgcttcatgccttcacgcatatattctgtgttgttggtctgatgtaggttattgttatcttttttatgagcaacaaaaggatcttatcagtcaaacctgataattaatattggttccattttggaatttcactatggtgctatctctgaaggctgttgctcagcccatcacataactcatttcacttatgaactggttaatgaatttgatcaataagcatgctcaatatgcaaccaccaaagcacagatgcagatggatactgtgaagagaaggcatttatcatcttcacaatatgcttatgcagatggatgcagatgcagatgcacaatatgcttcttactacttgagtccaggactgatgtggtgtcttgataattctagcagtttctcagttttcaggaaacaagcctggtttttcaaggaaatcaactttattttgacgttattattcatgactatgatgttgtagggctgttacatggcctatatatactttatgtaacttccttacttgctacattgcttatccttagcttgagccaaaacattcgatgttatccaaaatgacttactaatgcttatattgtctaaatttgtctaggattcttcaatggggagaggacaaacggtttgatgaaatgcgcgataacttgggaaaactagcagttttctggattttccaggtaaccttttgtaactttttttgcctgcttaatttgttagtggcttaagagagccttaccgggccttctgtcctgatttgggcaggctgtttgggtatggactgtcagcttgcctgttacaattgtgaacgcaagtgacagcgatccctcaattgaagcccgtgatattattggttggatcatgtggctgatcggggcaggtatggaagcaatagctgatcagcagaagcttacgttcaagaattctccgagcaatcgtggaaggtggtgtaatgtgggtctttggagttatactcgccatccaaattactttggcgaggttagtcagtttattttgcacgaacaagcttggttttcactaacctgtaagcgaaaagtatttgcctatgcagtttgaccttgaaaaataaagtaaaacataggtcaatagtttgctaaaaaaaactgttgaaaacttggaccttctcattctctgccattcatcttgcatagctatctgtttctaccaattgcagatattttgttgtgcactgctggttatatatattctgcacacactttatatgatataatctatttaattttacagtgttttgaacaaatactgacatttgtttgacaatttaattcgacacagatattcctttggtggggaatatttgtagcatctactccagttctctcaggagctgaatggctcgtgatcctcggacctgtattcctgacgctcttgcttctcttcgttagtggaatcccacttctggaggttaacaaccacaacttctctttgaaattatatactttgttacttgcaaaaatgctaacacatcacaccattttatgctcctgttttgaaggcttctgctgataagcgctttggacagaacgaagaataccgcacgtacaagaacactacaaggtaaggaagaactcctagacatgacacttttcatggggaaattttgggaaatacaatcgcagagatttctgagttgtaaagtaccatcctacatgagaatgacatatgggacttggacccgtatatcaatgacacatatgatagtattttctaactctgtgatttttgcgattgtattaagcaaattggcccgttttcatatccccactccaagggtccaagcatttctttgcagatttcaacagcaaagggtgactagcttatgcatttgtattttttatctgcagtcctcttatcccactaccaccagctgtgtatggagccctgcctggatggttcaagatgggcttcctcttcgagctcccgctctacaatcgtgtaccgcaacgtgatcctgtcagctgatgatatcagtgatctctagcgattgttgtgtacaatgtgtgtagtataagatacttcctccgtttcacaatggaagtcattttagcattttccacattcatattgatgttaatgaatttagatagatatatatgtctagatatattaacatcaatatgaatatgaaaaatgctagaatgacttatattgtaaaacggagggaggacattgttattgtcgataagtgatttcttttcgctttggttattagggcagtgaaattgtatccacgtgaaaacattacgttcccttcagctctgtttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0708400, RefSeq:Os03g0708400