Os03g0718100

From RiceWiki
Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0718100| Description = Actin 1| Version = NM_001057621.1 GI:115454970 GeneID:4333919| Length = 2420 bp| Definition = Oryza sativa Japonica...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0718100

Description

Actin 1

Version

NM_001057621.1 GI:115454970 GeneID:4333919

Length

2420 bp

Definition

Oryza sativa Japonica Group Os03g0718100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29835267..29837686

Sequence Coding Region

29835834..29835893,29835977..29836370,29836620..29837233,29837315..29837380

Expression

GEO Profiles:Os03g0718100

Genome Context

<gbrowseImage1> name=NC_008396:29835267..29837686 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29835267..29837686 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacgccgaggatatccagcccctcgtctgcgataatggaactggtatggtcaaggctgggttcgccggagatgatgcgcccagggctgtcttccccagcattgtcggccgccctcgccacaccggtgtcatggtcggaatgggccagaaggacgcctacgtcggcgacgaggcgcagtccaagaggggtatcttgaccctcaagtaccccatcgagcatggtatcgtcagcaactgggatgatatggagaagatctggcatcacaccttctacaacgagctccgtgtggccccggaggagcaccccgtcctcctcaccgaggctcctctcaaccccaaggccaatcgtgagaagatgacccagatcatgtttgagaccttcaacacccctgctatgtacgtcgccatccaggccgtcctctctctgtatgccagtggtcgtaccacaggtattgtgttggactctggtgatggtgtcagccacactgtccccatctatgaaggatatgctctcccccatgctatccttcgtctcgaccttgctgggcgtgatctcactgattacctcatgaagatcctgacggagcgtggttactcattcaccacaacggccgagcgggaaattgtgagggacatgaaggagaagctttcctacatcgccctggactatgaccaggaaatggagactgccaagaccagctcctccgtggagaagagctacgagcttcctgatggacaggttatcaccattggtgctgagcgtttccgctgccctgaggtcctcttccagccttccttcataggaatggaagctgcgggtatccatgagactacatacaactccatcatgaagtgcgacgtggatattaggaaggatctatatggcaacatcgttctcagtggtggtaccactatgttccctggcattgctgacaggatgagcaaggagatcactgccttggctcctagcagcatgaagatcaaggtggtcgcccctcctgaaaggaagtacagtgtctggattggaggatccatcttggcatctctcagcacattccagcagatgtggattgccaaggctgagtacgacgagtctggcccatccattgtgcacaggaaatgcttctaa</cdnaseq>

Protein Sequence

<aaseq>MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG VSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKL SYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGI HETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF</aaseq>

Gene Sequence

<dnaseqindica>568..627#711..1104#1354..1967#2049..2114#ccaaccctaccaccaccaccaccaccacctccacctcctcccccctcgctgccggacgacgagctcctcccccctccccctccgccgccgccgcgccggtaaccaccccgcccctctcctctttctttctccgttttttttttccgtctcggtctcgatctttggccttggtagtttgggtgggcgagaggcggcttcgtgcgcgcccagatcggtgcgcgggaggggcgggatctcgcggctggggctctcgccggcgtggatccggcccggatctcgcggggaatggggctctcggatgtagatctgcgatccgccgttgttgggggagatgatggggggtttaaaatttccgccatgctaaacaagatcaggaagaggggaaaagggcactatggtttatatttttatatatttctgctgcttcgtcaggcttagatgtgctagatctttctttcttctttttgtgggtagaatttgaatccctcagcattgttcatcggtagtttttcttttcatgatttgtgacaaatgcagcctcgtgcggagcttttttgtaggtagaagatggctgacgccgaggatatccagcccctcgtctgcgataatggaactggtatggtcaaggtaagctgtttggatctcagggtggtttccgtttaccgaaatgctgcatttcttggtagcaaaactgaggtggtttgtgtcaggctgggttcgccggagatgatgcgcccagggctgtcttccccagcattgtcggccgccctcgccacaccggtgtcatggtcggaatgggccagaaggacgcctacgtcggcgacgaggcgcagtccaagaggggtatcttgaccctcaagtaccccatcgagcatggtatcgtcagcaactgggatgatatggagaagatctggcatcacaccttctacaacgagctccgtgtggccccggaggagcaccccgtcctcctcaccgaggctcctctcaaccccaaggccaatcgtgagaagatgacccagatcatgtttgagaccttcaacacccctgctatgtacgtcgccatccaggccgtcctctctctgtatgccagtggtcgtaccacaggtgagcacattcgacactgaactaaaaggctgtgaggatgaattttaattttgacattcacatgtagatgagatttagttctgcaatcttcaattgtcatacagcaagactatataatagctttcaaaataaaatcataggcagttctcataaatggaatcatgtttgaacatcctaattctgttggcatggagtgctttgacattttgatgtgctacagttgtgaataactgaatttccttttcccaggtattgtgttggactctggtgatggtgtcagccacactgtccccatctatgaaggatatgctctcccccatgctatccttcgtctcgaccttgctgggcgtgatctcactgattacctcatgaagatcctgacggagcgtggttactcattcaccacaacggccgagcgggaaattgtgagggacatgaaggagaagctttcctacatcgccctggactatgaccaggaaatggagactgccaagaccagctcctccgtggagaagagctacgagcttcctgatggacaggttatcaccattggtgctgagcgtttccgctgccctgaggtcctcttccagccttccttcataggaatggaagctgcgggtatccatgagactacatacaactccatcatgaagtgcgacgtggatattaggaaggatctatatggcaacatcgttctcagtggtggtaccactatgttccctggcattgctgacaggatgagcaaggagatcactgccttggctcctagcagcatgaagatcaaggtggtcgcccctcctgaaaggaagtacagtgtctggattggaggatccatcttggcatctctcagcacattccagcaggtaaatatacaaatgcagcaatgtagtgtgtttacctcatgaacttgatcaatttgcttacaatgttgcttgccgttgcagatgtggattgccaaggctgagtacgacgagtctggcccatccattgtgcacaggaaatgcttctaattcttcggacccaagaatgctaagccaagaggagctgttatcgccgtcctcctgcttgtttctctctttttgttgctgtttcttcattagcgtggacaaagttttcaaccggcctatctgttatcattttcttctattcaaagactgtaatacctattgctacctgtggttctcacttgtgattttggacacatatgttcggtttattcaaatttaatcagatgcctgatgagggtaccagaaaaaatacgtgttctggttgtttttgagttgcgattattctatgaaatgaataacatcgaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0718100, RefSeq:Os03g0718100