Os03g0719400

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0719400| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001057629.2 GI:297601595 GeneID:4333927| Length...")
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Gene Name

Os03g0719400

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001057629.2 GI:297601595 GeneID:4333927

Length

3405 bp

Definition

Oryza sativa Japonica Group Os03g0719400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29911954..29915358

Sequence Coding Region

29912233..29912346,29912429..29912803,29913062..29913154,29913274..29913363,29913447..29913511
,29914476..29914546,29914644..29914682,29914866..29915284

Expression

GEO Profiles:Os03g0719400

Genome Context

<gbrowseImage1> name=NC_008396:29911954..29915358 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29911954..29915358 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggagcatgcaggccgcggaggcggcggggcggatcagcgcgctgctgtcgctgctcgcgctgcggcggctcatcgccttgctccagccgctcgccctgctcctgctcctgcccttccggtggcgcggcgcgcgccccggcgccgccgccgcggcggcggcggcggcggcggacgccgtggccgcctcggtcgcgtcgggcgggaagaaggggaaggccgccgtcgtgctgcgggtccccgccgggtcgccgatcgtcgccgcgaggcgccaggcgtcggcccgccgggagatcgccgcgcggcgggcgcgcgaggccggccgcgagtacgagctcatccccacccaccgcggcgagacgctgttcacgcagtgctggtggcctcacggatcctcctccgccattaagccgagggcgctcgtcgtagtcatgcacgggttgaacgagcacagtgggagatacgatcatctagctaggaggttgaacgacatcggtgttaaggtttatgggatggactggactggtcatggtggaagtgatggtcttcatggttacgtgcaatctcttgaccatgctgtcagtgacttgaaaatgtatctcaagaaaattttagctgaaaaccctggtcttccatgcttctgttttggccactcaactggtggaggcatcattttgaaggctatgcttgatccagaggtagattcttgtgttgagggcatcttcctgacatcaccagctgttcgtgttcagcctgcccatccaatcataaaggtcatggcccctgtgtttgccctcatagccccaagataccagttcacggcttcacacaggaacgggccaccggtatcacgtgacccggaagccctgaaggctaaatattcagaccagcttgtgttcaccggttccatccgagttagaacagggtacgagatcctacgcctgacgtcgtatttgcaacagcacttgcacagaatcactgtcccgatgctggtgatgcatggtgccgatgatatggtgaccgatccccaaggatcacagaaactgtacgaagaagcttcatcctcggacaagtccctcaatctgtacaacggtctgcttcatgatctgctcatcgagcccgagaaggagaagatcatggacaacattgatgagcatcccggcctcccgatggtgatgacgcggtctttgatcatctgcagagccgaggagggcgagcgttgctgcaagcctgcgatgctgctggcctcccggcgttggtaa</cdnaseq>

Protein Sequence

<aaseq>MAGSMQAAEAAGRISALLSLLALRRLIALLQPLALLLLLPFRWR GARPGAAAAAAAAAADAVAASVASGGKKGKAAVVLRVPAGSPIVAARRQASARREIAA RRAREAGREYELIPTHRGETLFTQCWWPHGSSSAIKPRALVVVMHGLNEHSGRYDHLA RRLNDIGVKVYGMDWTGHGGSDGLHGYVQSLDHAVSDLKMYLKKILAENPGLPCFCFG HSTGGGIILKAMLDPEVDSCVEGIFLTSPAVRVQPAHPIIKVMAPVFALIAPRYQFTA SHRNGPPVSRDPEALKAKYSDQLVFTGSIRVRTGYEILRLTSYLQQHLHRITVPMLVM HGADDMVTDPQGSQKLYEEASSSDKSLNLYNGLLHDLLIEPEKEKIMDNIDEHPGLPM VMTRSLIICRAEEGERCCKPAMLLASRRW</aaseq>

Gene Sequence

<dnaseqindica>3013..3126#2556..2930#2205..2297#1996..2085#1848..1912#813..883#677..715#75..493#gagacccaccaccaacgacctcgcgaccgcgcctgcgtcgccgcgcgcgcgtgtggaggaggaggaggaggaggatggcggggagcatgcaggccgcggaggcggcggggcggatcagcgcgctgctgtcgctgctcgcgctgcggcggctcatcgccttgctccagccgctcgccctgctcctgctcctgcccttccggtggcgcggcgcgcgccccggcgccgccgccgcggcggcggcggcggcggcggacgccgtggccgcctcggtcgcgtcgggcgggaagaaggggaaggccgccgtcgtgctgcgggtccccgccgggtcgccgatcgtcgccgcgaggcgccaggcgtcggcccgccgggagatcgccgcgcggcgggcgcgcgaggccggccgcgagtacgagctcatccccacccaccgcggcgagacgctgttcacgcagtgctggtggcctcacggatcctcctccgccattaagccgaggtgagacaccaccacgacgatgacgaccttccgtgaaagggatgaattgaatgaattcagggggggattccctctcacacacgtgcttgaattttttttttgttcctatctaaatcatttcacaaaaaaaggtctcgtttggtgctagtgtcctcatcagattgtccgttgattcttccgcagggcgctcgtcgtagtcatgcacgggttgaacgagcacaggtaatggatttactccagtttccatctgatatttaaagccggtggattgtattgtccggtagttgatggttggcctaccttttggttcatgtggcagtgggagatacgatcatctagctaggaggttgaacgacatcggtgttaaggtttatgggatggactggactggtgagtcttattgcaacgcttttcgcttatgcaactgcctgtttttgagtgttatgtgttcattttccgtactgaccttagctaactactcatatatttactggcttgagtatacttttttctttgaacgaatggcttgagtatactagaaattaataagtagtcgatagaaaattgggtgactggagcctctcacgaggcttcaaaattcatcaccatttcaaggacattgatgtatcttcaagttctcaatgattttaagcccgaaggcctgctgaaaatattgtctgtgacctggtaaagtaaggatagttggtgcaagttttgccctacaaaactactatgttattgtgagatgaatatatgggttatcaaacttcggtaagatagtattttgatggagttgtttactttggttagttttggtagggtagcaagccaaactagcctaagtcctgattgtgtatcagctcctattcctgcttaattatcttcaaatcccaatggttcaaaactaataggaaagagaggaaattggcacgttgactgattctctcttagggggtacacggtgccatttaaacatcatttaacaattccactttaccaattcctctattgccagttcagtatcagtcctttttgaaaccaaccatataaactgataccttcaattctccactttgtttcatctgtatttcatacctaacttggagcgcatagacatgtaactgcaatattctagtagttaggaaccaatgataatggtattctcagagagttggacaatggaccacctggtattcagaatttgtcaaattttatatgggctaaattgggtgttctgtaatcaatctactatgatggcccttggtaaaatactcactatggactgggctgtaatgtatttggttttttggtataggcccattggtctttctaacctacatacactattatgcaggtcatggtggaagtgatggtcttcatggttacgtgcaatctcttgaccatgctgtcagtgacttggtacgggcaattgaacttattacctttggtgttgtctgagaccacttgtataaaatcttattgaaatgcttctttcaatgtagaaaatgtatctcaagaaaattttagctgaaaaccctggtcttccatgcttctgttttggccactcaactggtggaggcatcattttgaaggtaacttcattggtaccataggaattgtactggtgtggtgttcacttctacattagcatgtgcttgtgagtgcacaaatgcataagcttaaatttgttggtgtgttttgttattggtaggctatgcttgatccagaggtagattcttgtgttgagggcatcttcctgacatcaccagctgttcgtgttcagcctgcccatccaatcataaaggtaagctgattgtaaaaatgcttatctgtaagatctaatcggtgtgcttgttaagataaaacatgatacataatacgtcccaattagctttatgctaactggggcagaaactagaaatgagagctgatgtgttctccattgctctgattggtgagaggagaacagctgctagtttctgtgtagactggagtagcatgcatggaacagtaactggcttttgtagacatctcagaaatattttctgctgtctatttgtaggtcatggcccctgtgtttgccctcatagccccaagataccagttcacggcttcacacaggaacgggccaccggtatcacgtgacccggaagccctgaaggctaaatattcagaccagcttgtgttcaccggttccatccgagttagaacagggtacgagatcctacgcctgacgtcgtatttgcaacagcacttgcacagaatcactgtcccgatgctggtgatgcatggtgccgatgatatggtgaccgatccccaaggatcacagaaactgtacgaagaagcttcatcctcggacaagtccctcaatctgtacaacggtctgcttcatgatctgctcatcgagcccgagaaggagaagatcatggacaacattgtggattggctgagcccgaggatttgacagctgatatccattcataggacgcagtctgatcgtccgcggagcgcgggggcaggatgagcatcccggcctcccgatggtgatgacgcggtctttgatcatctgcagagccgaggagggcgagcgttgctgcaagcctgcgatgctgctggcctcccggcgttggtaacatcataccacgagcattgcttctatctatattacgtgttgctgtagtaccaggcgatgatgggtcggcttactactgtcgcctccccttggtatcccggaatcctttttgtttgcagggatacgcctatgtaagattgttcgtttcgccctgtgtggctgcatgtgtggtgtccaataatttagatgccttttaccctccgatgagaggagacgttttctgcgttgcaatgtaatcagattttgcagcagaatatatttgcctggattgtctgatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0719400, RefSeq:Os03g0719400