Os03g0719900

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0719900| Description = Similar to Peptide transporter 1| Version = NM_001057633.1 GI:115454994 GeneID:4333931| Length = 5273 bp| Definitio...")
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Gene Name

Os03g0719900

Description

Similar to Peptide transporter 1

Version

NM_001057633.1 GI:115454994 GeneID:4333931

Length

5273 bp

Definition

Oryza sativa Japonica Group Os03g0719900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29946917..29952189

Sequence Coding Region

29947125..29947947,29948279..29948835,29949231..29949448,29949542..29949647,29950386..29950463

Expression

GEO Profiles:Os03g0719900

Genome Context

<gbrowseImage1> name=NC_008396:29946917..29952189 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:29946917..29952189 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaggtgacggtggtccgtgcggagcgcgaggaggagtccaccctggagcagggtctcctcgccatcccggaggaatccaaccaacttacatacactggagatggatctgtcgacttttctgggaatcctgttgtgaaggagagaactggtagatggagggcatgcccatttatcttaggtaatgagtgctgtgagcggttggcctattatggaatctccacaaaccttgttacatacttgacaaagaaactgcatgatggtaatgcttctgctgctagcaatgtgactgcatggcagggaacttgctacttaactccccttattggagctatactggctgatgcatactggggaaggtattggactattgcaacattctccacgatatacttcattgggatggctgtactgactctttcagcatcagttcctacattcatgcctccaccttgcgaagggtccttttgcccaccagcaaatccattgcagtatactgtcttttttcttggactttacctaattgctcttggtactggtggtattaagccctgtgtctcatcctttggagcagatcaatttgatgatacagacccagttgagcgaatccagaagggatctttctttaactggttctatttctcaataaacattggtgctctcatatcaagcagttttctggtttgggtgcaagacaatataggatggggaataggctttggcattccaacaattttcatggggctggccatcataagtttcttctctggaacatcactttatagattccaaaagccaggcggcagtcctattacacgagtatgccaggtggttgttgcctcctttcgcaagtggaacgtacatgttccagaggatagctctcgcttgtatgagttgcctgatggggcttcagcaattgaagggagtcggcaattggagcacaccgatgaactcagatgtctggacaaagctgctacaattactgatcttgatgtgaaagcagatagctttacaaacccatggcgaatatgcactgtgactcaggtggaagaactgaagatattggtaaggatgttccctgtctgggcaacgactattgtgttttctgctgtctatgctcagatgtccaccatgtttgttgagcaagggatgatgcttgatacatcagtaggtccattcaagattcctccagcatctctatctacctttgatgtggtaagtgtcattatatgggtccccctctatgatagtatcttggttccaatagctaggaggttcactggcaacccgaggggctttacagagttacagaggatggggattggtttggtaatctcaatcttttcgatggcggcagctgcagttcttgagattaaaaggttggacattgcaagggctgaacatttggtggatcaaaatgttccagtaccactgaacatctgctggcaaattcctcaatatttcttggttggtgcctcagaggtcttcacatttgtcgggtcacttgagttcttctatgatcaatcaccggatgccatgaggagcctctgcagcgcactgcagcttgtcacaacagctcttgggaattatctcagtgcattcattttgacattggttgcgtacttcacaacaagaggaggaaatcctggatggattcctgataacttgaatcaaggtcacctagattatttcttctggcttcttgctgggctcagttttctgaactttgtgatatatgtcatctgcgcaaacaaatacaaaagcaagaaagcagcttga</cdnaseq>

Protein Sequence

<aaseq>MAEVTVVRAEREEESTLEQGLLAIPEESNQLTYTGDGSVDFSGN PVVKERTGRWRACPFILGNECCERLAYYGISTNLVTYLTKKLHDGNASAASNVTAWQG TCYLTPLIGAILADAYWGRYWTIATFSTIYFIGMAVLTLSASVPTFMPPPCEGSFCPP ANPLQYTVFFLGLYLIALGTGGIKPCVSSFGADQFDDTDPVERIQKGSFFNWFYFSIN IGALISSSFLVWVQDNIGWGIGFGIPTIFMGLAIISFFSGTSLYRFQKPGGSPITRVC QVVVASFRKWNVHVPEDSSRLYELPDGASAIEGSRQLEHTDELRCLDKAATITDLDVK ADSFTNPWRICTVTQVEELKILVRMFPVWATTIVFSAVYAQMSTMFVEQGMMLDTSVG PFKIPPASLSTFDVVSVIIWVPLYDSILVPIARRFTGNPRGFTELQRMGIGLVISIFS MAAAAVLEIKRLDIARAEHLVDQNVPVPLNICWQIPQYFLVGASEVFTFVGSLEFFYD QSPDAMRSLCSALQLVTTALGNYLSAFILTLVAYFTTRGGNPGWIPDNLNQGHLDYFF WLLAGLSFLNFVIYVICANKYKSKKAA</aaseq>

Gene Sequence

<dnaseqindica>4243..5065#3355..3911#2742..2959#2543..2648#1727..1804#gttgatggtagtagacggcttcagaatttgagtgcaggactgttaacattagggagcttctgtacacgacgaagcatgtatctccccatctgagacagacaattcttcgagtgcgaagcatccgtggcacttctatgtgcacgattcctcgagtgctacaaacggtttcgctaccaacaacggctcgtgttcttctgaaggaatctgacgtgacgtgcagcggcagggcacttgactgaccgatgagttcgttgctttcccggcccgtttgccactcctggtacgcttcctccttggataatactactcctactactactatattttggtttctactaatgactattataatttttttgtgaaccgtagactttggtgttggctggcgttctaatcaatcaccaaacgttctactactgcatatactactcctatacctcttaaatattgcaccactagtactatataaaaatggttatgaaatgacactgatatgtactcagtaaaagggtgtttggaaactagggactaaatttagtccctctcataaaagcataaggtggtgtttggttggagggactaaagtggagctaaactttagtccctctcacaaaaaatttagccccactttagtccctccaaccaaacaccacctaaagtgaccaacattttacttttatagtactccgtattaagcctcttgcagaaagtagggatctgctcggttactactgtagtaaggttgtgtttagatccaaagtttggatcctccttttccatcacatcaacctgtcatacacacataacttttcagtcacatcatctccaatttcaaccaaaatctaaactttgcgctgaactaaacacagcctaaacaaatctatttctataggttaacctactccctccgtaaagaaaaataaatcaaaacccaaaatcggttttttttacgaagtacgtgttttccaaaagactattatgatataacttgtcacgcatttattcccaaatacgaccatagctaaaattttgattgagagaaacaaatttactcatgataacatggataaatctatattagtttatttttaattttacggtattctaaatttattctaaattctactactagcttaaaaattaaaatatcatatataataaccaacctaatagcccacccacacaacagtcaattatagatctatattacatcattaatatctaacttactcacctctcacataatagtagtttattagagtacgtattacagcttatgaatctattcatttcttctctcattcatgtgtcatttacatcatctttgttatactcagctttaagatgtacactacatattttttttctcacaaatttgttatactcactttaggatttacactgcatatttttcccacaaaaaaactctgataccctcaccaactaccagtcagaacccgtttctatcacagaacaatcgtagcgaggggaggggaaaaagacgaccccgaatcgccttaagacagtgggtgttcttgtcgtgcgcttcaccgtttgtcttgttggacccggagaccccacatatccagatctgcaagcttcctcctcctccttcctcctgatcctttagcttcctatatacgattccaccatcgaaggccagggcccagacttgcttgccgcaggttactgatccaccgaaggagggaggcgcccgcccgccgccatggccgaggtgacggtggtccgtgcggagcgcgaggaggagtccaccctggagcagggtctcctcgccatcccggaggtgagtttgaatccgccctctgtttctttggcgcgccggcggtgaatcagcgatcgtgcttgtgaatcgtgttgagaatttttttttcgttcttttttttgggaggtgaatcgctgttttcgatttcagtgaggagtgaggaatatgttagggttgtttgtttaggtacaccaccttaagtcttcggctgagcggaaaattggaagggaaatatttctcttctatgtattcgatatcgattcgtggaagttaactttgctgaacaatcgtccctacttatagctttttttttaaaaaaaaaacaactaatatctgtttgttctatttttcttaatttttaagcaaaaaaaaattctggcttgtggattattcaactcctgtactgcgcaatatgggaaaatggcatccttgtcctggaaggacttacgataattttggctgccgcatgccaacgcaactacctaggaaccagcatagtgctgcagcagtacagctgcttcctttgcgtctgaactctgaatgttgaagtcaagtatacagtttagatttgtggtcttactgaattgatacattattcagtcagcaatgcacatttaaacttaagttactctgtgacgactgtcaatgcacattgatttcttaccgagttaaaagttctctatagtcattataagctgttcagttattgcccaacaaaaattgtttgatgagatggcactgtaaatatctttattccaggaatccaaccaacttacatacactggagatggatctgtcgacttttctgggaatcctgttgtgaaggagagaactggtagatggagggcatgcccatttatcttaggtaattttctaacactaatctacaaggtatcaaggtctattattatgtcggcatctgcaatgatatataattaactaccatcactgaccacaggtaatgagtgctgtgagcggttggcctattatggaatctccacaaaccttgttacatacttgacaaagaaactgcatgatggtaatgcttctgctgctagcaatgtgactgcatggcagggaacttgctacttaactccccttattggagctatactggctgatgcatactggggaaggtattggactattgcaacattctccacgatatacttcattgtaagtcatctttctcctgatattttatggtgtaccatgtatcagttcttttatggactcctcaaaatgaaagaagaaacatttattagctatgaatgtagaaatggtttgtgaatgtggtatatatatatacgctctcagattagtgagtatgtgatgcagcttctcaaacttaagatggcctgctgtactctttcccaattcttaaatgaactgctaggaagggtagagctgagtagatctgtttctttactgtctactgaataggcctgtaattcttgtgtacaagctctcttcataggctcatagctgtccgtatttgaactgctgaaccgaactgattctataatttgaccgggttacattgttatatttacatcatattttgattgtaggggatggctgtactgactctttcagcatcagttcctacattcatgcctccaccttgcgaagggtccttttgcccaccagcaaatccattgcagtatactgtcttttttcttggactttacctaattgctcttggtactggtggtattaagccctgtgtctcatcctttggagcagatcaatttgatgatacagacccagttgagcgaatccagaagggatctttctttaactggttctatttctcaataaacattggtgctctcatatcaagcagttttctggtttgggtgcaagacaatataggatggggaataggctttggcattccaacaattttcatggggctggccatcataagtttcttctctggaacatcactttatagattccaaaagccaggcggcagtcctattacacgagtatgccaggtggttgttgcctcctttcgcaagtggaacgtacatgttccagaggatagctctcgcttgtatgagttgcctgatggggcttcagcaattgaagggagtcggcaattggagcacaccgatgaactcaggtgtgttcctctctgagctaaaattgcagcagcagcagaccatagctcagtgcacaattcctagcagctcttggcccttgaagaactaggaaaatatattttctgaaagttattaggtgtagtgtttctcttcttctttttgtgatggttaacattttagttttgataaattgcgacttaaatattatagatactggccttttggcctagcgctttagaaaaaatagctaaatatttatgtttgacttttgatatctgctcgtcctctatttccatatttgccgagaaactaacgacctaacatatatactctcaatgatattcatttcagatgtctggacaaagctgctacaattactgatcttgatgtgaaagcagatagctttacaaacccatggcgaatatgcactgtgactcaggtggaagaactgaagatattggtaaggatgttccctgtctgggcaacgactattgtgttttctgctgtctatgctcagatgtccaccatgtttgttgagcaagggatgatgcttgatacatcagtaggtccattcaagattcctccagcatctctatctacctttgatgtggtaagtgtcattatatgggtccccctctatgatagtatcttggttccaatagctaggaggttcactggcaacccgaggggctttacagagttacagaggatggggattggtttggtaatctcaatcttttcgatggcggcagctgcagttcttgagattaaaaggttggacattgcaagggctgaacatttggtggatcaaaatgttccagtaccactgaacatctgctggcaaattcctcaatatttcttggttggtgcctcagaggtcttcacatttgtcgggtcacttgagttcttctatgatcaatcaccggatgccatgaggagcctctgcagcgcactgcagcttgtcacaacagctcttgggaattatctcagtgcattcattttgacattggttgcgtacttcacaacaagaggaggaaatcctggatggattcctgataacttgaatcaaggtcacctagattatttcttctggcttcttgctgggctcagttttctgaactttgtgatatatgtcatctgcgcaaacaaatacaaaagcaagaaagcagcttgagctaatcaggagttaaaagactgtcgtcatgggaatttcacttcaaaattctgtatatatgtgcacaaagtacatgttgaagcagcgaccgtaacaagagaactttaaccatcctgtactctgtatttgatgctactatacattttatactttttgttctgtagatattaatttattgaagctacttgtggaatgtagctttgcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0719900, RefSeq:Os03g0719900