Os03g0722600

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0722600| Description = CAP protein family protein| Version = NM_001057647.2 GI:297601603 GeneID:4333945| Length = 4793 bp| Definition = Or...")
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Gene Name

Os03g0722600

Description

CAP protein family protein

Version

NM_001057647.2 GI:297601603 GeneID:4333945

Length

4793 bp

Definition

Oryza sativa Japonica Group Os03g0722600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30077758..30082550

Sequence Coding Region

30080184..30080356,30080464..30080788,30081424..30081488,30081587..30081758,30082237..30082530

Expression

GEO Profiles:Os03g0722600

Genome Context

<gbrowseImage1> name=NC_008396:30077758..30082550 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30077758..30082550 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggcgctcgtggagcggctggaggcggcggtggcgcgcctcgaggccgccgtggcctccggggcctcgctgtcggcggcgccgcgggacctcggggacgggctggacgcggcggcggcggcgtcggatccggcgatcgtggcctacgacgagttcgtcgccggggccgtcggccgcctcaccgccgcggccgagaagatcggagggaaggtgctcgacgccaccaaggtcctcgccgaggccttcgccgtctccaaggaccgcctcgtccaggccaagcagctccagaaacctgcatcaatggctgatgcacaagacttctttaagccgctgaatgatgttattgcgaaagcaattgcgatgactgaaggaaggaggcctgactatttcaaccatatcaagagtgttgccgacagtctcactgctttggcgtgggttggcttcctaggaaaggattgtggcatgagtttccctacagcacatgttgaagaaagttggcagatggctgagttctacaataacaaggttcttgtggagtacaggaacaaagatgctgaccatgttgagtgggctaaagctttgaaggagctatacatgcctggtttacgggattttgttaagaaacattaccctcttggtccttcctggggtccagttggaggtgcacctgtatcccaaccaaaggctactgctccagctcctaaagcaccaggggctaaggctccccctccacctgctctaccttcggcacccctttttaccacagagaaatctcctaaatctgcacagcctaaagaaggaatgtcagctgtctttcaggagattagttcaggcaaagctgtgaccacaggattgcgaaaggttactgatgacatgaagactaaaaaccggtctgatagaagtggtgttgttagcagcagcactgctgctccggctgctgctcctgagaagacctctcgtgcagggtctttctccttcaagtctgggcctccaaaattggagcttcagatggggcgcaagtga</cdnaseq>

Protein Sequence

<aaseq>MEKALVERLEAAVARLEAAVASGASLSAAPRDLGDGLDAAAAAS DPAIVAYDEFVAGAVGRLTAAAEKIGGKVLDATKVLAEAFAVSKDRLVQAKQLQKPAS MADAQDFFKPLNDVIAKAIAMTEGRRPDYFNHIKSVADSLTALAWVGFLGKDCGMSFP TAHVEESWQMAEFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSW GPVGGAPVSQPKATAPAPKAPGAKAPPPPALPSAPLFTTEKSPKSAQPKEGMSAVFQE ISSGKAVTTGLRKVTDDMKTKNRSDRSGVVSSSTAAPAAAPEKTSRAGSFSFKSGPPK LELQMGRK</aaseq>

Gene Sequence

<dnaseqindica>2195..2367#1763..2087#1063..1127#793..964#21..314#agcttgttgattccgccgccatggagaaggcgctcgtggagcggctggaggcggcggtggcgcgcctcgaggccgccgtggcctccggggcctcgctgtcggcggcgccgcgggacctcggggacgggctggacgcggcggcggcggcgtcggatccggcgatcgtggcctacgacgagttcgtcgccggggccgtcggccgcctcaccgccgcggccgagaagatcggagggaaggtgctcgacgccaccaaggtcctcgccgaggccttcgccgtctccaaggaccgcctcgtccaggccaagcagctccaggtacggggcgcggcttctctcatgtgttcctgccttgatctcttagattttgggtgtgctcggcgcgtagatctcccggcgttccgtactgtttgggccaatctgatgtgcgtcccggggaggaatctcgcgggaatgactgatcaacccgagatttggaggcgaattcaggattttggtattttgtttatcgagatggccagggccattctgctggaggttcattgtgcgatgacgtgcttacatgtttattgataacatttatgtacaaaattattgataacatttatgtacaaaattacttcagccattgtgagatctgaaaaatgcgatgtccattcttattgctagcctgaactttgattggttctaagttgggaacattacacatagtcattcagttactaagggcgagggggggtgaagaggtgcccattcttgcatcagtaatcagcttttttttcctaatgttgcgcagaaacctgcatcaatggctgatgcacaagacttctttaagccgctgaatgatgttattgcgaaagcaattgcgatgactgaaggaaggaggcctgactatttcaaccatatcaagagtgttgccgacagtctcactgctttggcgtgggttggcttcctaggaaaggattgtggttagtaaatttgttatgtttggattttagcattggtgtcttgccgactaccatatatatcattctgtaatatttctcccattcttcttctctgcaaggcatgagtttccctacagcacatgttgaagaaagttggcagatggctgagttctacaataacaaggtacactttttttattcgaccattttctatatttgctttactaacaatttgccacttttagatttagcatttaacaatttgccacccatagacatgtgggtccagctggcaaattgttaaacgccacatgtaagagtggcaaatagttaaatatctccatattttatacctacagtatgtaaagtcacaaaatgcgtcaattgtgaagcctggtcagaatgctcaaagttttctccttttagaaagggatgctagacaatcattctcgcgatgagaatggctttcgtatggtgagaagtagggctgttttgtcacctttcattattccttcagtctgtgtatctctcaagtttctgggaaataatgcattttgttatatgcatatcataaagtgtttcacataataaaatgtgcgcgacatccaacaatttctttcaccattagcctgacaagtaagaaaccaactactcctatgaaaaacatagtagtagttttttttacctgtttttccagtattccttatagctgagtacgcgatgatgatattaatcattgacctgagttatctcattcaattgcagaaccatacacataattatactgttttgaagaatgctcattaatcttcctcttaggttcttgtggagtacaggaacaaagatgctgaccatgttgagtgggctaaagctttgaaggagctatacatgcctggtttacgggattttgttaagaaacattaccctcttggtccttcctggggtccagttggaggtgcacctgtatcccaaccaaaggctactgctccagctcctaaagcaccaggggctaaggctccccctccacctgctctaccttcggcacccctttttaccacagagaaatctcctaaatctgcacagcctaaagaaggaatgtcagctgtctttcaggagattagttcaggcaaagctgtgaccacaggtagatgaaaacacgtgattcatctattttgtgacatttttttcccttttgtttttgttatcaatactgaaaaacagacctgtgacagccctattactgttttgcaggattgcgaaaggttactgatgacatgaagactaaaaaccggtctgatagaagtggtgttgttagcagcagcactgctgctccggctgctgctcctgagaagacctctcgtgcagggtctttctccttcaagtctgggcctccaaaattggagcttcagatggggcgcaagtgagcttcaccctgattattaaacaaaacaccaaatagattactatctaagactctagtatatactgtcaattggtacagtatgggtttgattgatggcctgcatggctgcatgaacaccaaccaggtccaacaatgaggattatctgggaagcctcgtttctggttagctaggttgcattagtgagttggtacagaagttgcaagaatgggggctttggtagacaaatagcttgaaaccatacatttctatatagttaaattatatgtacaagataagtattgcaaatagaattaattacatacatctagttaatttcaaatttgagtagtatgttatatgccacaaattcatataattccacatgattgaagcttcccaagacacaataaccatttattttattatggtggcaccgtggcagtctgaaggaccttgcatcatttactcatttagacatatagtcagaaggacgccatataattttcttgttctgataaaatgtgcttatattatatattgttgattattctgttcatatttccctgagatataaaaaaaatggcagatgggtggtcgaaaatcaagttggtaaaaagaaccttgcaatcgatgattgtgatgctagacaatctgtatatgtgtatggatgcaaggattctgtccttcaagtaaatggtaatatacacctttatttgggatatgtaacgtattacatatcacgttctcccatattatttggtgtcataacaattataaaacattttgcaggtaaagtgaacaatatcactgttgacaaatgcaccaaagttggaatcgttttcaaggttagtgggttagtttaaactgttgagaccaaatttaaccctgagctaaattttattctattactgtggcaaaactaaattctgtttaccgaatgtttcagcatgttgtagcagcttttgaagttgtcaattgcaatggtgttgaggtgcaatgccaggtattcagttttggaatgctatactcataactgtaaatgtgtgaacagtgttaaggagtattctatctggttacattactgctcttccctctctaaaaggatgtcgcttttgtgtgtgttctggattgcttgtcatacttttaggatttgacctttatctaattttagaaatatcaagcttgggcatgcccagaatcatctaggtttaagcaatctgccgatctcctaatctcctttgcttggtcagttattattatacgatgtcataaaatcactattggatggtcaggtcgaaagactgaaatgttggacattcaccctcatcatgctgccagcagatgaggcgcaaagtctggcacaaaagaatgcgagggactagataattgcttgtttttgaacttaatgttttatcgcctttccttttgaatttagtacttataaatttcaacaaattattctgtctagaagctatttttatttgtgttctgttgtcctgacccctgagtgtgagttttcattgccattcggtacgtaagctttaccatcaccgtgtttagttgcaaacttttttttcaaacttccaacttttccatcacatcaaaactttcctacacacataaacttccaacttttccgtcacatcgttccaatttcaaccaaacttccaattttagcatgaactaaacacacccttgtctgtgttgctgtcagagactgaagttctttaacttgcagggtacagcaccaacaatatcaatcgacaacacatctggatgtcaattgtacttaagcaatgattcacttggagcctccatcacttcagctaaatctagtgaaatcaatgtgatggttccaagtggtgctactgatggtgattgggtaagatctgatcttctgtctatgtgtttaccatgacccaattgggaattctttaaatctgttgtgggtgatgttagttgttgccttgttggtgtgcacattaactgggcaatataatcaaacacctttgatgatgcagacatctcttttgagtacaaacagtaccattaggggcttacagtcgatatcctcttgcttctagagacaatctatatacagtctggcgcttaagatattgttcttatattgcaggtggaacatgctttgccccaacagtacatccacagcttcaaagacgggcaattcatcacctcaccggtgtctcattccggagcatagctacaatcataccggcctttctgggtttgtctgtgcattggttgtgtgttgagagttgtaacagtatttgatgtttgttggagatgctgtttggagtgttggatggtgcctacgattgctgtttcttctgccctactcactgtgttggttggtgtatttgcatgccaacaaactactgttgtatgtttgagctgattgatgatcattctttctgcatgactgtcac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0722600, RefSeq:Os03g0722600