Os10g0346300

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0346300| Description = Multicopper oxidase, type 1 domain containing protein| Version = NM_001070934.1 GI:115481611 GeneID:4348374| Length ...")
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Gene Name

Os10g0346300

Description

Multicopper oxidase, type 1 domain containing protein

Version

NM_001070934.1 GI:115481611 GeneID:4348374

Length

5741 bp

Definition

Oryza sativa Japonica Group Os10g0346300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10647945..10653685

Sequence Coding Region

10648379..10648500,10649600..10650619,10651460..10651579,10651783..10652030,10653222..10653373
,10653493..10653630

Expression

GEO Profiles:Os10g0346300

Genome Context

<gbrowseImage1> name=NC_008403:10647945..10653685 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10647945..10653685 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcgctgccagagctcccggccgacggcggcagtagctgccgtcgttgcagctgtctccatgatcatcgtcctcgtctccggcacggccatcccgtcggcggccgcggcggcggccgtcgagcacacgttcgtggtgagccaggtgaatatgacgcacttgtgcaaggagatggcgttcacggtggtgaacgggcagctcccggggccgacgatagaggtcaccgagggagactccgtgaccgtgcacgttgtcaacaagtcgccatacaacttaacaatccattggcatggagtgtaccagttgctgaactgttggaacgacggggtgccgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcgccgggcaggaaggtaccctgtggtggcacgcgcacgacgcctttctccggggaaccgtacacggtgctctcatcatacgccctaggcacggcgccgcctcctatcccttccccaggcctcacagggaggtccccatcatcataggggagtggtgggagaaggatcttccacaggtggacaggaacatgaccaacggttactttgatgattactccagtgggtcaacaattaatggcaagcttggagatctcttcaattgctccggcgtgttggaagatgggtacgtgctggacgtagaacctggcaagacgtacctgctgcgaataatcaacgcggcgctcttctctgagtacttcctcaagatcgccggccacaggttcacggtggtcgcctccgacgccaactacctcactccctacagcaccgacgtcgtcgtcatcgcgcccggcgagacgctcgacgccattgtcgtcgccgacgcgcccccgtccggcaggtactacatcgccgcccagcccatccaggcgccgccgcccgacacgcagacgccggagtacgccaccagaggcacgctgcagtacagcagcaacagcaggaactcgtcagccgctgccatgccggagatgccgcaccagcacgacacgatgagatcgttctacttccgcggcaacctgacggccggcgcgcgcctccaccgccacggccggcggcgtgtcccggcgcgcgccgacgagagcctgttcgtcacgctcggcctcggctccgtctgccgccacggcggcgcgtcctgcaagagagggggcaacctgaaggagtccatcgtggtggcgaacgtgaacaacgtctcgttccacatccccgccgcggcggcgacgccgatcctggaggcgcactactaccaccgcctccacgccggcgccggcgaggaggaggaggagctcgccgagcggccgccgagggcgtacaactacacggaccaggcgctgacgccgttcgggccggaggagatgcggctggaggcgacgtcgagggcggtggtgacgcggcggttcaggcacggcgcgacggtggacgtggtgttccagagcacggcgatgctgcagggggactcgaacccgatgcacctgcacggccacgacgtgttcttgctggcgcagggcatcggcatctacgacgcggccagggatgagggcaagttcaacctggtgaacccgccgaggaagaacaccgtgctcgtccccaatcttggctgggcagccgtccgatttgtcgccgacaacccaggggcatggttaatgcattgccacttcgaattccatttgtcgatgggcatggctgcagtgttcattgtagaggatgggccaacagtggatacatctctccccccaccaccggaagatttctag</cdnaseq>

Protein Sequence

<aaseq>MKRCQSSRPTAAVAAVVAAVSMIIVLVSGTAIPSAAAAAAVEHT FVVSQVNMTHLCKEMAFTVVNGQLPGPTIEVTEGDSVTVHVVNKSPYNLTIHWHGVYQ LLNCWNDGVPMITQRPIQPNHNFTYRFNVAGQEGTLWWHAHDAFLRGTVHGALIIRPR HGAASYPFPRPHREVPIIIGEWWEKDLPQVDRNMTNGYFDDYSSGSTINGKLGDLFNC SGVLEDGYVLDVEPGKTYLLRIINAALFSEYFLKIAGHRFTVVASDANYLTPYSTDVV VIAPGETLDAIVVADAPPSGRYYIAAQPIQAPPPDTQTPEYATRGTLQYSSNSRNSSA AAMPEMPHQHDTMRSFYFRGNLTAGARLHRHGRRRVPARADESLFVTLGLGSVCRHGG ASCKRGGNLKESIVVANVNNVSFHIPAAAATPILEAHYYHRLHAGAGEEEEELAERPP RAYNYTDQALTPFGPEEMRLEATSRAVVTRRFRHGATVDVVFQSTAMLQGDSNPMHLH GHDVFLLAQGIGIYDAARDEGKFNLVNPPRKNTVLVPNLGWAAVRFVADNPGAWLMHC HFEFHLSMGMAAVFIVEDGPTVDTSLPPPPEDF</aaseq>

Gene Sequence

<dnaseqindica>5186..5307#3067..4086#2107..2226#1656..1903#313..464#56..193#tttgtatacacgctacatgtagttgtagactgcagagcaaattgaatagtaaacaatgaagcgctgccagagctcccggccgacggcggcagtagctgccgtcgttgcagctgtctccatgatcatcgtcctcgtctccggcacggccatcccgtcggcggccgcggcggcggccgtcgagcacacgttcgtggtataagcatgaggaccatttcgatcacgatcttgctagctagctcgtagtaatattaatttggtgttgaaagtgttaattgtacgtacagattaatcgtggaattgttggggatgcaggtgagccaggtgaatatgacgcacttgtgcaaggagatggcgttcacggtggtgaacgggcagctcccggggccgacgatagaggtcaccgagggagactccgtgaccgtgcacgttgtcaacaagtcgccatacaacttaacaatccattggtaacagatcaactgctccctataccagcttatattttatgaattttgttcaatcattcttttttcttaaagaaatactacgaaatatattgatacatcaacgataacttctgtgtggtgtggtacatatctatgtaccatatcttgatactactaatgggtactatcatgtttaccgtactaatatcaacatgttacgtagatattccctccgttctaaaatataataaattttggttggatgggacatatcctattactacgaatatggacaaaaaaaaagtatcatagcctggtacctgtgtgtcgtattatgtttggtaccacatataccagatttggtacctacgacatcatgctaatgccatcatggtacataggtatcataacctgatacttgtggtgggtattatgtctagtaccacatataccagatttgatatctatgacattatactaacgccatactgacgtccacacaaaaagtattccattggtgttgggtagttgccctcgttttcttataccatgcaaaaggtgcgtgctattccgtgtatactataataattcttttaatataactatatctaactttgttataagccaaacttcttttattttaactatcattatcgaaaatttcatacatattgacaacacaagattgatactactatattcctcgtgaagaatatgcatggctataaataatattgaagatagttttgatgtcccaatggatttatattatatttgtcatattaggaagtaggcatctactacttttgatccttaaagtaagtccatttagatttgtgctaaacataatattattattgaccgtgacaacaaataatatactttttagatatatattcaaagtgctacatttggtacctgtctttctgtgttctaatatacaagctagataagaggaaataccctttactttgcattgctttcacgaacacattgaccatgatggttctttaagacaaccagtgtatagaaatttttaatgatctatgtgaaaatttctgagaatctcaggaaaaattaagcagcgagaaaatagatcatcatgcctcttgattggcttaatgtatgcctgttcattcctgcagttacatttttgctccatgatcataatatttcctgtgtgtcttaacttcgatgcatcgatcatcacaggcatggagtgtaccagttgctgaactgttggaacgacggggtgccgatgatcacccagcgccccatccagcccaaccacaacttcacctaccggttcaacgtcgccgggcaggaaggtaccctgtggtggcacgcgcacgacgcctttctccggggaaccgtacacggtgctctcatcatacgccctaggcacggcgccgcctcctatcccttccccaggcctcacagggaggtccccatcatcataggttcgcgaatatttatatatttgatttatagatccgatatgaattttgcatgttacttaaaaagatatgcgcgcatactatttttgtctcaaaatataaaagatttatatagacaaaatatcatatgtattttaggactaagatagtacagaacaaaagattatgtgagcttatgatgaaccgcttttgttcgtccatgccaggggagtggtgggagaaggatcttccacaggtggacaggaacatgaccaacggttactttgatgattactccagtgggtcaacaattaatggcaagcttggagatctcttcaattgctccggtaatgatcagttcttgctctcatacatcctccctcatcctgtgttttaagtcaactatttgaaaacgataggaacaaatttgtcttcagatatactccgtagtattattgagttatatgtttcaaatacgatattgttgtctaaaacatcattatcaagattaatgtaaaaaatgaagtcttcgtggaacaaggcgagtgtgtgtgcgcgcgcgcatccatgcatatccaaaaggattcttgctattttatggaatggagtggttgttcctatctgtattattgggtcaggatatttgaaaatggtacgaacaaatctgtcataaaataaatttttgataaatattttatgtcaaaaaatataattcttcttgggcaacaccttgtcattttctaaaacatattttcttatggaacaaatggagtataacatacctacagatacatcattgcatatagaaaacgattattttgttctactttaatgaggtcgatcttcttgggttaatcccttctaaggggattgagaaggattttaaaaacatttattttcacacctattgtgatgtggaatcatatcctcaatcaattcatttcaatcctcctacttaagattaaccgaactaagcctgaatagagtggttccaggggtgaagccacggcttttcgttttgcataggacacagggtcttatgcttgtacatcactgcaattctgcaaattacctctaaataacaattagtctcaatatatattatactacatgtgttatttatgcatataattaatttttattctatattcgcgcattgagtggtgctgaataatgtaatattgaaggcgtgttggaagatgggtacgtgctggacgtagaacctggcaagacgtacctgctgcgaataatcaacgcggcgctcttctctgagtacttcctcaagatcgccggccacaggttcacggtggtcgcctccgacgccaactacctcactccctacagcaccgacgtcgtcgtcatcgcgcccggcgagacgctcgacgccattgtcgtcgccgacgcgcccccgtccggcaggtactacatcgccgcccagcccatccaggcgccgccgcccgacacgcagacgccggagtacgccaccagaggcacgctgcagtacagcagcaacagcaggaactcgtcagccgctgccatgccggagatgccgcaccagcacgacacgatgagatcgttctacttccgcggcaacctgacggccggcgcgcgcctccaccgccacggccggcggcgtgtcccggcgcgcgccgacgagagcctgttcgtcacgctcggcctcggctccgtctgccgccacggcggcgcgtcctgcaagagagggggcaacctgaaggagtccatcgtggtggcgaacgtgaacaacgtctcgttccacatccccgccgcggcggcgacgccgatcctggaggcgcactactaccaccgcctccacgccggcgccggcgaggaggaggaggagctcgccgagcggccgccgagggcgtacaactacacggaccaggcgctgacgccgttcgggccggaggagatgcggctggaggcgacgtcgagggcggtggtgacgcggcggttcaggcacggcgcgacggtggacgtggtgttccagagcacggcgatgctgcagggggactcgaacccgatgcacctgcacggccacgacgtgttcttgctggcgcagggcatcggcatctacgacgcggccagggatgagggcaagttcaacctggtgaacccgccgaggaagaacaccgtgctcgtccccaatcttggctgggcagccgtccgatttgtcgccgacaacccaggtgcatataggagtattggattttcttgtgcgcacgctttatatacttagtatcgatcggttccaaaataacctcattttttacccatctcacacaaacacaaaccaatacttcttcctccatcccgctcaataagctaggcacgtacacacacatttcaaaatttaactttctaaatattttattgtaaattaagttttatttgacaaaaataatatcattggattgatatttaaatttaattttatataattgtgattttgttgctgcaaacataatatattttgagaaaatcaaagtaaaaaaaattagttttaaagactatgccaagatcgaccatgccttcctaagtgggcgcaaagggagtataaaagacaaaaagattaattagaatatccttcactttaacaaactccaatacagttcttactacttacaaaccgcaatacatttgtcccttaatctcacaagcctcaatacatgtgtcctctatttttataaactccaatacaatgcttgcttcaaatattaaattatttgggtcaaataagtttacgaaagaagaagttattttgggacagagcgattatgtatcatgaaagctgcaaattattttcaggtattaattcgctaaaatacggaaatgtaaagatggagcaatcttattatccactatgtctgattcaaaatatatgtcatttattaggacatccacatagtcaacaaaatgatactttgaccaactatatattgatcacataaaaatataatgttttaactaaagaaacatactaattacttttaatgtttaatctagtaacgtgtgcgtaccatatattgtctatataagtatttttttatatgatatcatgtactcatgtattttgactaaagtgtatatatcatactataaatacccaccattgtttgaaataaaactatttcttgatgttaacatacaactaaaaagtcataatttaatcggtacttttctttacatatacaccaaaaaatttgtcttagttgaactcctatatgtcttggactccaagtatatatatatatatataatgcatggtttgctttgttcgtcacacaggggcatggttaatgcattgccacttcgaattccatttgtcgatgggcatggctgcagtgttcattgtagaggatgggccaacagtggatacatctctccccccaccaccggaagatttctaggacggaaggccatgaagagaatctcctctcctgcgaaattaattcttacctccaagtctcaggaggcatgtacctaaaaatataattttccaccgttaatagttttcgaataaactagataaactaatgaatcacatgtatgttttcttcgagacaaaatgtatctgtgtgaatttcatatatctttcctaaacattaattgattaggctgttatgccaaaaagatctctatcaacaaataaggtagtacgcacatttattcatagagataggtgtgtgtttatatgtttcgatttatcacaatcataagactataagtccacagggtgtgcgcgcctttttaatagtgagtacgcatgcagttacacatgtaagtatatgcatctgtaatgtatttgcaataagaaaaagaaatgcactattgctacgatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0346300, RefSeq:Os10g0346300