Os03g0725400

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0725400| Description = Similar to WD-repeat protein 5 (BMP2-induced 3-kb gene protein) (WD-repeat protein BIG-3)| Version = NM_001057665.1 G...")
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Gene Name

Os03g0725400

Description

Similar to WD-repeat protein 5 (BMP2-induced 3-kb gene protein) (WD-repeat protein BIG-3)

Version

NM_001057665.1 GI:115455058 GeneID:4333964

Length

4472 bp

Definition

Oryza sativa Japonica Group Os03g0725400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30247886..30252357

Sequence Coding Region

30247951..30248616,30251062..30251370

Expression

GEO Profiles:Os03g0725400

Genome Context

<gbrowseImage1> name=NC_008396:30247886..30252357 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30247886..30252357 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggaggacaacccggggtacgccctgcgcgcgacgctggcgggccaccgccgcgccgtgtccgccgtcaagttctcccccgacggccgcctcctcgcgtcggcctccgccgacaagctcctccgcgtctggagcacctccgacctcgccagccccgtcgccgagctcgcgggccacggcgagggcgtctccgacctcgccttctcccccgacggccgcctcatcgcctccgcctccgacgaccgcaccgtccgcatctgggacctcggcgacggcggcggcggcggcggcggcggcgagccccgcctcatgaagacgctctccggccacaccaactacgccttctgcctcgccttcagcccccacggcaacatgctcgcctcgggctccttcgacgagaccgtccgcgtctgggaggtcaggtccgggaggtgcctccgcgtgctccctgcgcactccgagcccgtcacctccgtcgacttcaaccgcgacggcgccatgatcgtctccgggagctacgacggcctctgccgcatttgggactccgccaccggccactgcatcaagaccctcatcgacgacgagagcccgccggtctccttcgccaagttctcgcccaatgggaagttcgtgcttgccgccactcttgatagcaagctgaggctctggaatttctcagctgggaaatttcttaagacatatactggccatgtgaacacaaaatactgcattccagcagcattttcaatcaccaatggcaagtatattgtcagtggctcggaggacaagtgtgtctacatatgggatcttcagtcaagaaagattttgcagaaattggaaggtcatactgacacagtcattgcagtgtcatgccaccccaatgaaaacatgattgcatcgggaggacttgacggcgataagacggtgaaagtatgggtccaaaaggaggaagatcagatggaagtctaa</cdnaseq>

Protein Sequence

<aaseq>MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLR VWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGE PRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTS VDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATL DSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRK ILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV</aaseq>

Gene Sequence

<dnaseqindica>66..731#3177..3485#aagaaatttccaaaaccccaaacccttgttcccttccccgtctccggttggcgcggcgcggggcaatggcggcggaggacaacccggggtacgccctgcgcgcgacgctggcgggccaccgccgcgccgtgtccgccgtcaagttctcccccgacggccgcctcctcgcgtcggcctccgccgacaagctcctccgcgtctggagcacctccgacctcgccagccccgtcgccgagctcgcgggccacggcgagggcgtctccgacctcgccttctcccccgacggccgcctcatcgcctccgcctccgacgaccgcaccgtccgcatctgggacctcggcgacggcggcggcggcggcggcggcggcgagccccgcctcatgaagacgctctccggccacaccaactacgccttctgcctcgccttcagcccccacggcaacatgctcgcctcgggctccttcgacgagaccgtccgcgtctgggaggtcaggtccgggaggtgcctccgcgtgctccctgcgcactccgagcccgtcacctccgtcgacttcaaccgcgacggcgccatgatcgtctccgggagctacgacggcctctgccgcatttgggactccgccaccggccactgcatcaagaccctcatcgacgacgagagcccgccggtctccttcgccaagttctcgcccaatgggaagttcgtgcttgccgccactcttgatagcaagctggtgagtttcttcaaaacttctccctcaacttgcagcaatgcagcatatgtggaaatttgtatttgctagtatgtgattttgtgaatgtatttattatgtgcttcgttagaatgcgaaacttaaaactattagctgtcctaggattgcaatgctagagcaattatttcatcgtagatcgcagccagtgcggtacatggtgccagagtagattgactggaaactaagggcttagtgttgccaggttgtccagtgaggatgctgccaatgaaggcattatgggggtaattataggatctgtgtttactagttatgtcagctacccttgttggtgtcatgtctgtattgttggaggtgaagatggtaattctcatcttaatctccttttctgttgcaaggcttatggagtatgcttaaattttaattttcggaaattaagattatatccatttgcaaggtggcccaagcttaattagcaattacagggacaatgtgttcacatgttggaactctggggttgatagcggtgtgcaattggcgaattttcaaagtgagtgtgctgtaattgaagaccttaggtgtatttatatgaatcatcgttcactatttacactgggtgtacctttgtcggtgctgacttggtggggttcaagatgatacttctgatcttatcaatgcttttctgtcgaaccacttatgctttctgctaatatcagtcacatattgatgcccaacatttaaacccctttatgctatgtctagcctgggaaatatatgatgctttttgggatcccttaggtaccaccgaggttatctgaacttgagaccatgttgccatgttgaatccctacatcctagctcttggaaaaagttggtcatatggaaatgaaatgtccttgtgaacttgtaatgctacaaggacatctctcaagaaggagacagaaggattaactcaatagatttaagtatttaacagcctcactgccacaacatgcacacatgatcttgcagttgtgtagatgcatgttatctctatatagttactatacttgccatgctttagtagactagtgtgtcgttagagaaaatatgacttttcagtagtttttcaaactgcaatgttgttagtgttgtgtgcaatcttgaggtagtgctagtgaacctggaaacctagaaatccacttgctttcgcaactaaacaattttgtgctggttaaggaagcgctagatgggtttatctttaggaatatagtttcgctggttgttttcagagtaaggtgagaactggggcattaatgagtagcttattaaagtttttctgtgtttgaaacaagcaattaataagaggccaaatgaaaatatttagttaacttgagggatcataaagctcaggaggggtattttttatatattgaattataagtgtgtacaataactatatgggtttcctcatgacggatgacgtagagattgggtattgagctcttaccatgacgttaggatggccaaaatgcttcagtatgcaatagacaaattgtgattattttatctaatcaatattttgttctgtgctgcaatattgtaaaagacaagtataaatgcttgcttggtacattctcaaattctgacacttatacaggtactttgataatattagccatcttacagttacggtgaattggaattattgttattcttatgtaccactgtgtatctatactgaaacatggttgtttcttaaatacgatgttcaacatcttcctgcataataaaagaaaatatttcatgtagttaattttttttctggtgcttatttatttgggagcctcccttgaagatcaagtcccagtgtttgatcatggttggagcaatttatcagttatcatactgaacatatccaattatctatgtctttagttccccgcttggtccacttggtgttttaatttgttaaatgctttacagtatattaggtccttccagcaatcctatcaacctccatcaatgctggagacaattcttggtaccatttctcaagaaattggagttggcctatcagcaagggtactacacccagcagatcctaaaaataatatctccacattgttttaagaggttaaattgtagtgccatttagcaaagcacattgctcttgggccttggctgtgtacaattatatcctatgcgctacctaactcagcagagtcctttgtgtacaactgaatattatgtagtgattctgtgacaacaatcccaacctcaccaaaccattttctgtacaactgaatggatttatgtagtgcactgatactttaaagctgctgcctgttggaggtttttttacttgacatcagtattgaatttttggtgtatgttcaggtgtctacagcctacttacgtgtactttgtgtcacaagagcagttctcacataatgtttatttatgcagaggctctggaatttctcagctgggaaatttcttaagacatatactggccatgtgaacacaaaatactgcattccagcagcattttcaatcaccaatggcaagtatattgtcagtggctcggaggacaagtgtgtctacatatgggatcttcagtcaagaaagattttgcagaaattggaaggtcatactgacacagtcattgcagtgtcatgccaccccaatgaaaacatgattgcatcgggaggacttgacggcgataagacggtgaaagtatgggtccaaaaggaggaagatcagatggaagtctaagtgagttcttattgtctcgactgtcatgtaacctgactgatgatggttggtaagctacttagcttccagactaattatagattggtgtggtggggaatgtaattggatgctgctttatcagcttttctcctggcttcgtgggttgtgttctggtgaactcttaatgaattgggatggttgtaacaaagcctggacataaagaattcttaaacttgatctgctcccttttgtaggttatttgcctctatgtgaagttactatgcctatgaaaatgcaaaatcaattgttcataggagtatatgttttggggctgttgcctgttggatacttgggctttgctttgcactttgagtagccttagttgggcttacatatgatatatgatgctaccattctatttggcctgcatgttgactagcatgcaccgtaagatttacagttgtttgactagcattgggaattgggctgaaccatctctctgaataatggagcagctattccctaaaagaactaaaagaacaatgggccatctgctgggaatctgggattgggcatacctgagcactttctgttaaacagatgtataatgttttctaaatatatgaatttacattattatcctgcctttggctacttgtttggtgaataatcaggtttttcctcatttttcctggcaggttgaaggacttccttctacattgatcttgccatcttaccatgctcagacatcagtacatcacgtagccctcagacaaagcaacacttcgtccacttcatataatggtagtaaaaaagacataaaaatatgctgccttcctattactaactcggtaaactgtcttgccgtgtcttcctttgccagcttgcggattagcagtgtcatgaattcagataagctgtgtatggttgttcctgaacaccaacagtgctgctttcttttctgtgccatttcattgggcacctaggaatgaacgactcgtctccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0725400, RefSeq:Os03g0725400