Os03g0726100

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0726100| Description = Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)| Version = NM_001057667.1 GI:115455062 GeneID:4333966| Length = 2...")
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Gene Name

Os03g0726100

Description

Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)

Version

NM_001057667.1 GI:115455062 GeneID:4333966

Length

2884 bp

Definition

Oryza sativa Japonica Group Os03g0726100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30287946..30290829

Sequence Coding Region

30288071..30288163,30289110..30289344,30289431..30289801,30289910..30290566

Expression

GEO Profiles:Os03g0726100

Genome Context

<gbrowseImage1> name=NC_008396:30287946..30290829 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30287946..30290829 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagtgcatctcgatccacatcggccaggccggtatccaggtcgggaacgcgtgctgggagctctactgcctcgagcatggcatccaggctgatggtcagatgcccagtgacaggactgttggtggaggtgatgatgctttcaacaccttcttcagtgagactggtgctgggaagcatgttccccgtgctgtatttgttgatcttgagcctactgtgattgatgaggtgaggactggttgctaccgccagctcttccaccctgagcagctcatcaatggcaaggaggatgcagctaacaactttgcccgtggtcactacaccattggcaaggagattgttgatctgtgccttgaccgcatcaggaagcttgctgacaactgcactggtctccaaggtttccttgtgttcaacgctgttggaggtggaacgggctctggtcttggttcccttctcctggagcgcctttctgtggactatggcaagaagtccaagcttgggttcactgtgtacccatcccctcaggtctccacctctgtggttgagccatacaacagtgtcctctctacccactccctccttgagcacactgatgttgctgttctgcttgataatgaggccatctatgacatctgccgccgctcccttgacattgagcgcccaacctacaccaacctcaacaggcttgtgtctcaggttatctcatccctgaccgcctccctgaggtttgatggtgctctgaacgtggatgtcaatgagttccagaccaaccttgtgccctacccaaggatccacttcatgctttcgtcctacgctccagtgatctctgcggagaaggcctaccatgagcaactctctgttgccgagatcaccaacagtgccttcgagccatcctccatgatggccaagtgcgaccctcgccacggcaagtacatggcctgctgcctcatgtaccgcggcgatgtcgtgcccaaggacgtgaacgccgccgtcgccaccatcaagaccaagcgcaccatccagttcgtggactggtgcccgacggggttcaagtgcggcatcaactaccagccgcccagcgtcgtccccagcggcgacctcgccaaggtgcagagggccgtgtgcatgatctccaactccaccagcgtcgtggaggtgttctcccgcatcgaccacaagttcgacctcatgtactccaagcgcgccttcgtccactggtacgtgggtgagggcatggaggagggtgagttctctgaggcccgtgaggatctcgccgcgttggagaaggactacgaggaggttggcgctgagtccgacgagaatgaggatggcgatgatggtgacgagtactag</cdnaseq>

Protein Sequence

<aaseq>MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGG GDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANN FARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVI SAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT IKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRID HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESDENEDGDDGDE Y</aaseq>

Gene Sequence

<dnaseqindica>126..218#1165..1399#1486..1856#1965..2621#aagccgagacaacgcagagaaaggcgtcttcgtactcgcctctctccgcgcctccgcgcttttcctcctcctctcccctctctcccttctccgccgccgtcgcagcatcaacccaatccgccgccatgagggagtgcatctcgatccacatcggccaggccggtatccaggtcgggaacgcgtgctgggagctctactgcctcgagcatggcatccaggtacggatccgcgtcccatctccctcaccccccgtgttcttcgtgcctgcttctgggtcagatctgggtggattcgcggttgttggatgtggggggctgtgtttatttgtcggtggatctggttgtctggatctgcgttttctctgtcgtagttagcggatctgatgaaatgtttagtgttcgtgtatactggtatggtggatctggtcctaggatgcgtggaatggatatatgtaggcgaattggaggatttattttgtgaattttgctgaaatgatagttctaaacactggatctgacctcgggatgctgttaaatgtggaaatcatggtcgatgctgtcatgaacatggtgttcttatggtagatctgagcaatgtatgtttcaaaattgtttgtcacatggaaatgctatggttctagatgcaatagaatgatacatgccgagatcccctctagttgatatgatagatcatgatgttttacagctatgtcatatgaatatgttcatttgttaccgatgtatttggatctacttaacatttccaaagcacgccgcgttctaattctagatctggtagtcatgtttgtacacgtcacccacctaatacaaatacatatgtctagtgtttggtgacactgcccgtcagatctgttttttccagatctgtggaacaaatactccacgcatgtatggtagttttgaaacgatcttgtatcttccattgttgtagtaacaactaaataaagtacaattgttcaattattgggaatcgtattttctgtagtgccgatgtacagcatattcatagatgtctatttaggaactcaaattttaaattgaggactagttatttattgtgggtcagtcttttgaattgtgttatcttgctgtactgaaataataatgtaccactaaggcgctaacatgtattttgtcctttcaggctgatggtcagatgcccagtgacaggactgttggtggaggtgatgatgctttcaacaccttcttcagtgagactggtgctgggaagcatgttccccgtgctgtatttgttgatcttgagcctactgtgattgatgaggtgaggactggttgctaccgccagctcttccaccctgagcagctcatcaatggcaaggaggatgcagctaacaactttgcccgtggtcactacaccagtgagttccattcttactaccacggtgctattttttttgttatgtggctaattacatgactaacttggggtgctaaatctttacagttggcaaggagattgttgatctgtgccttgaccgcatcaggaagcttgctgacaactgcactggtctccaaggtttccttgtgttcaacgctgttggaggtggaacgggctctggtcttggttcccttctcctggagcgcctttctgtggactatggcaagaagtccaagcttgggttcactgtgtacccatcccctcaggtctccacctctgtggttgagccatacaacagtgtcctctctacccactccctccttgagcacactgatgttgctgttctgcttgataatgaggccatctatgacatctgccgccgctcccttgacattgagcgcccaacctacaccaacctcaacaggcttgtgtctcaggtacagtcttgtatccttgcaatgatctcaaattctctgctatgttaattcactgccatttcttgtttgtgctgttctctaaccaacttgtttattgctaatgtgcaggttatctcatccctgaccgcctccctgaggtttgatggtgctctgaacgtggatgtcaatgagttccagaccaaccttgtgccctacccaaggatccacttcatgctttcgtcctacgctccagtgatctctgcggagaaggcctaccatgagcaactctctgttgccgagatcaccaacagtgccttcgagccatcctccatgatggccaagtgcgaccctcgccacggcaagtacatggcctgctgcctcatgtaccgcggcgatgtcgtgcccaaggacgtgaacgccgccgtcgccaccatcaagaccaagcgcaccatccagttcgtggactggtgcccgacggggttcaagtgcggcatcaactaccagccgcccagcgtcgtccccagcggcgacctcgccaaggtgcagagggccgtgtgcatgatctccaactccaccagcgtcgtggaggtgttctcccgcatcgaccacaagttcgacctcatgtactccaagcgcgccttcgtccactggtacgtgggtgagggcatggaggagggtgagttctctgaggcccgtgaggatctcgccgcgttggagaaggactacgaggaggttggcgctgagtccgacgagaatgaggatggcgatgatggtgacgagtactagaggagtcgtcgtcgtctgggggcttgatgttctgtgtgtcaaggcctgattgataactgctgctatcccatgatctgccagtgtggagttatcctgttgccgtgtgcgtgtgtcttcgagacatttgcttgtggtgatctgatgtttggggcttaatgggcttacaaccctcgttgttgtaacctgtgtgccctgttttatgtgagaccgcttcgtcacttataatatgcgcgtttgttcaattttatgtttgtttcttgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0726100, RefSeq:Os03g0726100