Os03g0726300

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0726300| Description = Protein of unknown function DUF221 domain containing protein| Version = NM_001057669.1 GI:115455066 GeneID:4333968| ...")
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Gene Name

Os03g0726300

Description

Protein of unknown function DUF221 domain containing protein

Version

NM_001057669.1 GI:115455066 GeneID:4333968

Length

6290 bp

Definition

Oryza sativa Japonica Group Os03g0726300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30305659..30311948

Sequence Coding Region

30306027..30306275,30306434..30306667,30306817..30307092,30307227..30307503,30307595..30307893
,30308067..30308258,30308497..30308706,30308858..30308921,30310160..30310306
,30310523..30310806

Expression

GEO Profiles:Os03g0726300

Genome Context

<gbrowseImage1> name=NC_008396:30305659..30311948 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30305659..30311948 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaattttctgcccttctgacttcggcaggcataaacatcggcctctgtgcgctcttcctgtcactctattcagtccttaggaagcagcctcacaactatggcgtctacttcgggaggcggctcgccgaggagaagttccggcagcaggtcgactacttctcgcttgagaggctcttgcctaccgctggatggatagtgaaagcgtactggtgcacggaagaggagatacgacgggttgctggcttggattccgtggtgttcctccgcctcttcatcttcagcatacgtatcttctcgataacttctcttgtttgcatatttggagtgcttcctgttaattaccatgggaaagaaacgaatcacggacgtattccagcagagtctctcaatgtattcacaattgcaaatctcaaagaaggatcacgaatgctttgggtgcattgtgttgccttatatgttataacaatatcagcttgtattcttctatactatgagtataagtatatatcaaggaagagattggcgcatattactggatcaccacctggtccgggtcatttttctgtgattgttcgatcaataccaaagtcagataatgagctacttgatgacactatcagaaatttctttgttaattatcatggatccagttacttgtcacatcagatgatctaccggaaaggaagtatgcagaaatttgtggataatgcagagagggtatataggaaatttgtaagagttaagatgtcttcatttggacagagtagaaggtctgacttgtccagatgtggtctttgtggagtacgggcttcgtcgtttcagcaatatcgcaataaattcatcaattccaagaagccagacctaagtgatccagaagtaattgaagctcagaaggattgtccaggtgctatagtattcttcaagactcgctatgcggcaattgttgcttcacgaattcttcaatcttcaaatcctatgctatgggtgacagattttgctcctgagccaagggatgtctattggtcaaacctctggatcccctatagacagatctggctccggaaaatagcaacacttgcagctagtgttgccttcatgtttgtttttattgtccccgttgcattcgtccaaagcatgatgcaactggatcagattgagcagctatttccaagcctgaaaaacatgttgaagaagcccttttttgtcaaacttgtaacgggatacctccctagcgtcgttctgctgctgtccctgtacacagttcctccattgatgatgttcttctcttccatagaaggatcgatttctcgcagtggcaggaaaaaaagtgcttgctgcaaaattttgttctttaccatctggaacgtcttctttgtcaatgtcctgtcaggatccgtgctaaatcagctaaatgtcttcactagaccaagggatatgccatctatgcttgccgaacttgtaccaaagcaggcaactttcttcatcacttatgtcctcacatcaggatgggcaagtctatgctccgagatattgcaagtgtacaacttagtatataacttcttcagaaaatgtatattttgctaccgggatgatccagaatatggctactctttcccttaccatactgaagtcccgaaagtcctcctgttcaacctgcttggcttcacattttcgataatggcacctctcatactgcccttcttgctagtctacttttgcctcggctacctagtgtatcgcaatcagatcctaaatgtctactacccaaagtacgaaatgggagggaaactgtggccaatcatgcacagcaccttggttttcgccctggttttgacacagaccatagctcttggagtgttcaccataaagcacgctactatatcttcagggttcaccgtcctactaatcatcgggacagtcctcttccatcagtattgcagacaccggttttcaagcatattcaactccttttctgcccaggatctgatagagatggacagagacgatgaacaatccgggaggatggaggagatccacaagcaccttctggacgcctactcccaaggcaccaccaacatggacaactccagttcttccaggaatggaggggctccaatcgaaatgatcatggaagaccctgcgcaggatgcacaggattctaaccaagaactctgtgacgccgtgaaggaagtgactgggtcgattcaggaacatgccgacgagatgtga</cdnaseq>

Protein Sequence

<aaseq>MEFSALLTSAGINIGLCALFLSLYSVLRKQPHNYGVYFGRRLAE EKFRQQVDYFSLERLLPTAGWIVKAYWCTEEEIRRVAGLDSVVFLRLFIFSIRIFSIT SLVCIFGVLPVNYHGKETNHGRIPAESLNVFTIANLKEGSRMLWVHCVALYVITISAC ILLYYEYKYISRKRLAHITGSPPGPGHFSVIVRSIPKSDNELLDDTIRNFFVNYHGSS YLSHQMIYRKGSMQKFVDNAERVYRKFVRVKMSSFGQSRRSDLSRCGLCGVRASSFQQ YRNKFINSKKPDLSDPEVIEAQKDCPGAIVFFKTRYAAIVASRILQSSNPMLWVTDFA PEPRDVYWSNLWIPYRQIWLRKIATLAASVAFMFVFIVPVAFVQSMMQLDQIEQLFPS LKNMLKKPFFVKLVTGYLPSVVLLLSLYTVPPLMMFFSSIEGSISRSGRKKSACCKIL FFTIWNVFFVNVLSGSVLNQLNVFTRPRDMPSMLAELVPKQATFFITYVLTSGWASLC SEILQVYNLVYNFFRKCIFCYRDDPEYGYSFPYHTEVPKVLLFNLLGFTFSIMAPLIL PFLLVYFCLGYLVYRNQILNVYYPKYEMGGKLWPIMHSTLVFALVLTQTIALGVFTIK HATISSGFTVLLIIGTVLFHQYCRHRFSSIFNSFSAQDLIEMDRDDEQSGRMEEIHKH LLDAYSQGTTNMDNSSSSRNGGAPIEMIMEDPAQDAQDSNQELCDAVKEVTGSIQEHA DEM</aaseq>

Gene Sequence

<dnaseqindica>5674..5922#5282..5515#4857..5132#4446..4722#4056..4354#3691..3882#3243..3452#3028..3091#1643..1789#1143..1426#atcaccaccaccaccgcacgggcgggcgggcgggcgatcgattcggcgagcgcttgcgcacacggtcgcttcgtgcggcgtcggagacaaccccggcagcctctccccctcccccgcgccgccgccgcggccaacctcctcctccatccggcgcacgcccggcgaccgaccggccggacgaccgatcgtcgaccgccgccgccgcatcgattccaaggtacgcgcgtcgtacatttctcttagccttagccgccgggagaggattgattcggagatggcgttgatgccctagctagcccacggagagatcggggaatgggggggccgagagggacatggatatcgatcgtcggagatcgcaatgcagggcgtccgcctccgcatgcggcgggggctgggtatgcgggggatttcgctgatcgccccggttgagcggcggaggatcgaattgcccggcaacccttgtggcgtagccccatgaatgaacgatccaaatgcaaaacgtggagtttgttcacggggctagggctagggcatcaacgccattgctttaccgcatttgctgtacatcgaaaagcacacttgcacactttcttcttatcgatctctctcgtgcgcgcgcacacatcaccgatttttttaagcggtcatcaacatctcacgtagccaacacatttttatctgtagaaaaaaagtagtcagcaaatgcctttttggcagtagctattagcttcaaaatgagaagacatattaataatatgctgcaatccaagtgttttctgaaaagtgaaaagtctccttttgtttgaggataacagaatgaaaattaagctttaatcgttgtggtgctagggcctagggacctaggagagtgcagttgtgccaatgtgagatccagtgacttgatggtgaaatggccagcaacctgaattgtgtagcttaattggtttcatgactcaagccagtgattagcacagttgaatgcaatacgattcttctccttttcgttactgcaagcattctgcatttattgtctttagtgaagtggtgattattaaaacattctgcatttcttggcttgtgaaaatttgcagctctttcatgggtagatggtcaggatcgccaatcggtagagccgggggatggaattttctgcccttctgacttcggcaggcataaacatcggcctctgtgcgctcttcctgtcactctattcagtccttaggaagcagcctcacaactatggcgtctacttcgggaggcggctcgccgaggagaagttccggcagcaggtcgactacttctcgcttgagaggctcttgcctaccgctggatggatagtgaaagcgtactggtgcacggaagaggagatacgacgggttgctggcttggattccgtggtgttcctccgcctcttcatcttcaggtttttctccattctgatttaggctccattttccacggcaggaattaatatatttaatcatgatttacatcgtttgataggatcatcttttttattgtggacatatcttgatacatagttctaataaaatgacaaaaccatataccttttggtactgggaagtataactgtttttaggtcgacaatttaacagttggtacattgtttcttctgcagcatacgtatcttctcgataacttctcttgtttgcatatttggagtgcttcctgttaattaccatgggaaagaaacgaatcacggacgtattccagcagagtctctcaatgtattcacaattgcaaatctcaaagaaggatcacgaatgtaagatctcggttcacctgaatcttgaaacaatttcctaatatatcatgttcacctgaagttggatacacgcaaaagaataatattagctgaaaattttggacgattgcatgctacaaagtaagaaaaaagaataaggcttcaattttgtaggcaacaaatgagccccttatttctcaataatatatttttatagttcttaaaccatgaaaatatactctataagtattttacaagttcatcttttaactgtagaaagaataggagccaccatgttttgcagtatcaggagttcccatttatttattatttagtatcactagtacagattaagctcgtccaacattaacatcctcagggatgacggaaagcatttgaaccactgctggtagcatcaatagtattggacaaacgacgaacaatacttcccctcttatctttgtttaaattcttttggcaacatcaaaattttaaatcaacttatcttttttttttttaagatcatcagcaacatttgttacgggtgttgggccaggaggcttagggccatgaccaggtcaagtagcctcaatggtagggagtgggatcctataatgtgaagttagaggaatgcggggattgacatgtgggccccactgcttgtgggcccacctgtcagtgaccatgttagagggaagttcatgttagaggatcctcttcccataggcacccttttcaggttgtaggcgccctctttaggttgcgtgaacagtacctacaaagtattttacagtcgttagagtttgttgcttaaaatataagatggtatccggctagtcttttagaattaagcaatgatgaagaagaattagtgtaatttccctcaaattctcttccccaacctataatctcatctcacctcaatcaagttgacgccaccaggctatcttcccggctgtgtttagccctaatgaatccttgccaataacacattttatttcttagtgggtcttaatttatttttccatgacgtacatcatttgatctgttggagtttttacattttatttcacgactaaaaactcgcatctttctcgaattagataaattactaacatccacttatgacaaaaggccttctccttatttcatttggtaaatcaatgttgttgattgctcaagtgttttaagatatgaacatttcctattctagttagtttattattattactgaaagtcttttttttttctttgcacaggctttgggtgcattgtgttgccttatatgttataacaatatcagcttgtattcttctatactatgtaagacctttccacacatttcttttttaccaaatggttttatctccaatttcctcatattccaagtagccatttgtggcagcttgttgtatattgtataatgtcttctttttttataagatatagtttattgtatattatcatgctgcaggagtataagtatatatcaaggaagagattggcgcatattactggatcaccacctggtccgggtcatttttctgtgattgttcgatcaataccaaagtcagataatgagctacttgatgacactatcagaaatttctttgttaattatcatggatccagttacttgtcacatcagatgatctaccggaaaggaagtatgcagaaatttgtggtaagaattcgtttcagcagtagagattttgttgtcctcaaatattgctggaattcaaactatattttctaacaattgatttagctactacaatctgatattcttacggaagcaagcagactaactattcatagttgaagttcaaattctggcttctgtttctgtttcagaaacacatgaaataagtccatatggtacctcgaatcacctcctcaggcatataagtttgtttcttcaggataatgcagagagggtatataggaaatttgtaagagttaagatgtcttcatttggacagagtagaaggtctgacttgtccagatgtggtctttgtggagtacgggcttcgtcgtttcagcaatatcgcaataaattcatcaattccaagaagccagacctaagtgatccagaagtaattgaagctcagaaggtcttctccctcctgatatcattgccatttgggttaaactactgcttttaactagtacattacatgatatccctcctcaccatagtcactcagtaatatgcatgtgtaaggttgcattgtaactcaggtttaggtgcatcagcatatataattcttgtcgtattactgaacaggattgtccaggtgctatagtattcttcaagactcgctatgcggcaattgttgcttcacgaattcttcaatcttcaaatcctatgctatgggtgacagattttgctcctgagccaagggatgtctattggtcaaacctctggatcccctatagacagatctggctccggaaaatagcaacacttgcagctagtgttgccttcatgtttgtttttattgtccccgttgcattcgtccaaagcatgatgcaactggatcagattgagcagctatttccaagcctgaaaaacatgttgaagaagtaagttcagactttctgagatcaccactagattatctgttcggatttaatgttttgacaatgacagcttctgtttgatcatcttgtttaggcccttttttgtcaaacttgtaacgggatacctccctagcgtcgttctgctgctgtccctgtacacagttcctccattgatgatgttcttctcttccatagaaggatcgatttctcgcagtggcaggaaaaaaagtgcttgctgcaaaattttgttctttaccatctggaacgtcttctttgtcaatgtcctgtcaggatccgtgctaaatcagctaaatgtcttcactagaccaagggatatgccatctatgcttgccgaacttgtaccaaagcaggtgatgatatttctttaccgccgaaatgccatcattttcatttttatctcacagctagaaataaatcaccatagcacattccattcccctttttcatatgttgcttttaaatggattattctccacttttacaggcaactttcttcatcacttatgtcctcacatcaggatgggcaagtctatgctccgagatattgcaagtgtacaacttagtatataacttcttcagaaaatgtatattttgctaccgggatgatccagaatatggctactctttcccttaccatactgaagtcccgaaagtcctcctgttcaacctgcttggcttcacattttcgataatggcacctctcatactgcccttcttgctagtctacttttgcctcggctacctagtgtatcgcaatcaggtgaacacacttccttcttgactcaacctgtgaacttgtttacttgatttatcaagttatcaatcaaagattattaagatcaaatcaatatattaacatcagttgtttttgaatacgtccatctgttaagcatcggaacatttttgcagatcctaaatgtctactacccaaagtacgaaatgggagggaaactgtggccaatcatgcacagcaccttggttttcgccctggttttgacacagaccatagctcttggagtgttcaccataaagcacgctactatatcttcagggttcaccgtcctactaatcatcgggacagtcctcttccatcagtattgcagacaccggttttcaagcatattcaactccttttctgcccaggttagtatgaaaaacattttcaggcagatcctctcctttgaaatggaggcatcttatggggattttatagaagttgaaccaattcctgtgaaaatcctgtaaaattccagcgttccaacggagcaccgaagtttgaacttaagctttggtttctgcaggatctgatagagatggacagagacgatgaacaatccgggaggatggaggagatccacaagcaccttctggacgcctactcccaaggcaccaccaacatggacaactccagttcttccaggaatggaggggctccaatcgaaatgatcatggaagaccctgcgcaggatgcacaggattctaaccaagaactctgtgacgccgtgaaggaagtgactgggtcgattcaggaacatgccgacgagatgtgacaactctgctagtatatattgttccgtgtcttgtttgattccatttgtaatctaccattcgctctgatgatgtgtgtagcttcgttatatgcttatacttaggccaagtagctgcttgattaatccggagaaagctccttgaatggtttaagggggggaactaactgtgcagattacccgaagtctctccctgtctcactttaccaccacggatgatgtgcatgacacagattcgtagcatgggcatcgagctcgtggatcaacttgctttaccttgcaaatttgtgtactttgaaaaattggaatatataactgtatatccaactttatgtgctgccccaatgttcctcttaacgttgtatattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0726300, RefSeq:Os03g0726300