Os03g0726500

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Revision as of 12:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0726500| Description = Conserved hypothetical protein| Version = NM_001057671.1 GI:115455070 GeneID:4333970| Length = 5296 bp| Definition ...")
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Gene Name

Os03g0726500

Description

Conserved hypothetical protein

Version

NM_001057671.1 GI:115455070 GeneID:4333970

Length

5296 bp

Definition

Oryza sativa Japonica Group Os03g0726500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30322379..30327674

Sequence Coding Region

30322824..30322903,30323195..30323335,30323421..30323514,30324977..30325216,30325484..30325534
,30325896..30325982,30326235..30326302,30326439..30326493,30326615..30326676
,30326797..30326997,30327089..30327248,30327340..30327528

Expression

GEO Profiles:Os03g0726500

Genome Context

<gbrowseImage1> name=NC_008396:30322379..30327674 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30322379..30327674 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccgcggacttgtacgggcgcctcaacaggagcagcacgcgggggttcctcgcatacgtggcggcgggggcggcgtgcgccgcggtgctcgcctgcttcgtcatccccgccgccgagccgcgcgccggtgacgccaatggcggcctccgcctctcctcgcggtcggcgcgcgtctggccggacctcgcgttcaactggcgggtggtggtggccaccgtcgtcgggttcctcggctcggcgttcggcaccgtcggcggcgtcggcggcggcgggatattcgtgcccatgctcaacctcctcgtcggcttcgacaccaagtccgccgccgcgctctccaagtgcatgatcatgggggcgtcggcgtcgtcggtttggtacaacctgcaggtgtcgcatccgaccaaggaggcgccggtcatcgactacaagctcgcgctgctcttccagcccatgctcatgctcgggatcacaatcggagtcgagctcagcgtcatcttcccctactggctcatcaccgtcctcatcataatcctcttcatagggacttcctcgcggtcattttacaagggaattctcatgtggaaggatgagacgaggatccagatggagacgcgggagcgagaagaggaatcgaagtcgtcctgtgccgcaagggatgtggttattgacccgagttgtgaagagcccctcctatgccagcctcagcccaaggagaaatctgctctggagactttcttgttcaatttgaggtggaagaatatcctagttctcatgactgtatggtcgtctttcttggtgctgcaaatcttcaagaataactcacaatcatgcagcactttctactgggtgatcaacattcttcaggtcccggttgcgttaagtgtattcctgtgggagggcgtacagctgtgcagagagagccgtgctcgacgcatggatgggaactgggagtgtgtctgtgaggcctctattgagtggtcacctgcacagctcatcttctgtgccttctgtggtttgcttggtggtactgttggtggccttcttggatccgggggtgggttcatccttggtccacttctccttgagcttgggtgcatccctcaggttgcaagtgcaacagcaacattcgtgatgatgttctcctcatccctatccgtagtggagttctacttcctgaacagattcccaatcccttttgctgtctacttgatctgcatttccatattggctggattctggggccagtccttggtccggaaactcgtgcacgtgctcaagcgagcatctctgattgtcttcatcctatcctctgtcatcttcgcgagtgctcttacaatgggtgttgttggaacccagaagagcatcagcatgatcaacaaccatgagtacatggggttcctcgacttctgcgagaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAAADLYGRLNRSSTRGFLAYVAAGAACAAVLACFVIPAAEPR AGDANGGLRLSSRSARVWPDLAFNWRVVVATVVGFLGSAFGTVGGVGGGGIFVPMLNL LVGFDTKSAAALSKCMIMGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGIT IGVELSVIFPYWLITVLIIILFIGTSSRSFYKGILMWKDETRIQMETREREEESKSSC AARDVVIDPSCEEPLLCQPQPKEKSALETFLFNLRWKNILVLMTVWSSFLVLQIFKNN SQSCSTFYWVINILQVPVALSVFLWEGVQLCRESRARRMDGNWECVCEASIEWSPAQL IFCAFCGLLGGTVGGLLGSGGGFILGPLLLELGCIPQVASATATFVMMFSSSLSVVEF YFLNRFPIPFAVYLICISILAGFWGQSLVRKLVHVLKRASLIVFILSSVIFASALTMG VVGTQKSISMINNHEYMGFLDFCEK</aaseq>

Gene Sequence

<dnaseqindica>4772..4851#4340..4480#4161..4254#2459..2698#2141..2191#1693..1779#1373..1440#1182..1236#999..1060#678..878#427..586#147..335#gcacgccatttcccccctcaccctctcgctcccgctcctctcctctcctcttcgtcctcgcattttccgccgccgccgccgcggcgctggtgtggttgagtgtttttttttttttgggttttttgtttgtttgggttggattggatatggcggcggccgcggacttgtacgggcgcctcaacaggagcagcacgcgggggttcctcgcatacgtggcggcgggggcggcgtgcgccgcggtgctcgcctgcttcgtcatccccgccgccgagccgcgcgccggtgacgccaatggcggcctccgcctctcctcgcggtcggcgcgcgtctggccggtaagccgctagcaagcgagctcgcttctctcgtgcgtgcgtgcgcgtgatggttgcgctttcggcgtgctgacctcctgtggggttgcaggacctcgcgttcaactggcgggtggtggtggccaccgtcgtcgggttcctcggctcggcgttcggcaccgtcggcggcgtcggcggcggcgggatattcgtgcccatgctcaacctcctcgtcggcttcgacaccaagtccgccgccgcgctctccaagtgtaagcccgccgctctgcctgcctcgccttccaccggtgacatggctcgttttttttttttttctgaaagttggttttgaattcggcgcaggcatgatcatgggggcgtcggcgtcgtcggtttggtacaacctgcaggtgtcgcatccgaccaaggaggcgccggtcatcgactacaagctcgcgctgctcttccagcccatgctcatgctcgggatcacaatcggagtcgagctcagcgtcatcttcccctactggctcatcaccgtcctcatcataatcctcttcataggtttgtacagctaacaaatgtgttgttaagcacgatctggcgcttttgtggcgctgtcctttgcgtgccctgtgagatcgctgagattgatgtgtgtttggtgcgcttgatcgattgcagggacttcctcgcggtcattttacaagggaattctcatgtggaaggatgagacgaggatccaggttagttttggtcgccatctgtcttgtttggtttgttggttgggttcgctttctaattactgtgtcctgataatctcttttttttttctttttgttcttggggggaattattccattgcagatggagacgcgggagcgagaagaggaatcgaagtcgtcctgtgccgcaagggatggtacgaaacagccccaagccgcttgtacagcgtcagaaagtcatatatatatatatatatatatatatatatatatatatatatatatatatatatacatacatattttaaacatgatatgatccaatttctgcagtggttattgacccgagttgtgaagagcccctcctatgccagcctcagcccaaggagaaatctgctctggtaagccacaaatatcttgccaatctgccagtacgattcatgatctactaagcaatagcactgcctacgatcttgatcatatagtatgctttgattggcttaggggcactaattaagcttgttcaatgattgctatgattggtttagggtggcgttggtagatactatgaacatgcaagaaagcaatataaaacaaagtacagtttgtcctatgccctgtgctcactgattcgatgttatttttaattccaggagactttcttgttcaatttgaggtggaagaatatcctagttctcatgactgtatggtcgtctttcttggtgctgcaaatcttcaaggtatccttttttacattcaactcaagaatagttttgcactttcaatctagtctatttcaaaatgtccttccacataacactgatagacacacaatgtttatccagtaagcacaagcaatgcacattgagtaaataacaaatgattgttcatggtctcatggttcaataattcttgcgcacatgtgcaagtgtgagtctgtttgtcagtggttattattgccttgtggctcagtgtgctgacgtggtccctccatcactgctcttatagtgtcgattcagcctttacacatagagcttttgctggctttctttttttggtctggaatttgtcactaactgctaaatgttttcccccctgcagaataactcacaatcatgcagcactttctactgggtgatcaacattcttcaggtaagacatcattctgccttgtgacacttgatccgcttgactgtttttcactaccacaattaaattctcctgggtcccaagttgtcacagtaaccttgagctcgtgcggtgtttctattctatgaaatattatcgccatggatctactaagcttagtttgtccatccaccattttttgagcagctcaaaacttcactctgcctacacttttcattcacttgcacactgaaagatgataatatctaaccagtttatttatcaactcaggtcccggttgcgttaagtgtattcctgtgggagggcgtacagctgtgcagagagagccgtgctcgacgcatggatgggaactgggagtgtgtctgtgaggcctctattgagtggtcacctgcacagctcatcttctgtgccttctgtggtttgcttggtggtactgttggtggccttcttggatccgggggtgggttcatccttggtccacttctccttgagcttgggtgcatccctcaggtattttatattattttcatttcttgcggttcagtttcaaacgttattcagatcatcatacttaagaaaattaattttcatttgattgtgtttaagctagtgtcttgtttctgacatgcaactcatgagagaacgtggcttagccttcccaagagggataacaagtaaaatgagcatgagtggggtaccatgctgataaggatgccaaataagcattggggggggggggggttcatggctccacgtgctgcatcctaatcctagtatagatcattgtaacgcatttgcatctaggcaagaccagtgaagagacaagaacgggtcttgtcattgtctatgtagcttctataagtgtgcacacgtccttacaaaaggtgaaaaaaaaatcccaatacaacttggactcggtattctttcagcacttcaaatgcatatactgaatgaaacctgttagcatcagaaccatatgcttgcaatatataattcaaaatggcaattatgagcaacttctattcccgcaatttgctcatactattgaaagcttatggaatgccaaataaatagttcagcatccagtatgtgcaagtaatgccaaatattttggccgtctggacaaaactgtatgttgtgatatatgttacttcgtacatatatattcatttttaattctttaggtagccttgataaatgcacatagacacttttggattgaagtggcctgttagaactttgttactaactttatctagtatatatctgtttgcatgagggtgtacatgaggagggagtccaactagctatttatgtatcattatatgattgtcagaaacctttagttaactgcatatagacaggttcatttgcaatagtatattctatgacgttgatttcaggctagataagcattaggtacactgtactggtttaagatttctgtacggatttatacatttatgagttctaaaactgactaattttcaaataataaggcattccatgaatatttctgtgactaatgactcccataacattagtaaaggatatttatgatggaggcatgtctgctttatctttcccctacaaaacaggcatccgatgcaaaaaaggaaaaaaaataataatccaaattgcatggttgataaaatattgtttgaaagtgtcctgatatttgaaactatttaaattgtgcattggctggcctggtcctcaatcatctacactgtgcccctattattggcaggacctaagctttcgattatcattcagaaaagaaacatagcagtatttgatatgaatcccatgtaactagttaaatctaaggaaacggtgccttgttcttcatatgcagaagaatgttgtgatttataatcatttatgttatgtgattttcggcgttctttgccccttttttcctgttttgtcatttatttcactgtttgtgggattgtcatttatttgtcaggttgcaagtgcaacagcaacattcgtgatgatgttctcctcatccctatccgtagtggagttctacttcctgaacagattcccaatcccttttggtaattcctggatgctaatatctgtttagaaatagcatttccaaagtaaccgttcaataatgatgtgaactgtttgttcctgcagctgtctacttgatctgcatttccatattggctggattctggggccagtccttggtccggaaactcgtgcacgtgctcaagcgagcatctctgattgtcttcatcctatcctctgtcatcttcgcgagtgctcttacaatgggtaatggccagaacacattgactgaatgtcctttttagataacaaaccactaagtgctatgcagtctaattgaaattcagccaacaaaatcatttaccatggatcctacgttttccttagaaacatctaaacagaatacactttagtattgacaggttcaaaccagtttggcctgcaaaagccgttccttgattagcctttataggcccatcgctttgcctttatctatatgtatgtctgtactgcctgttcttctcagctttcctaacatttgtttcctcgtaaattcaggtgttgttggaacccagaagagcatcagcatgatcaacaaccatgagtacatggggttcctcgacttctgcgagaagtgaagaacccatcagactgtccatactctctgggggaaatccaggtcaacacctaattgacctcacctcccccaaatttaaacgagaaaagaaataaggtcgtgaagtgcacatatgcaccgcgttagcgcctcgctaacctgcaagcgcacgtccgacaaagtatcgtagtgtattccagttttcatggcatatgcatgtgttagctcctggctaacctgcaaaccctatctcttggtcttgtaagagtcttctggtctttttgtcatgcatgcgttagctcctggctaacctgcaatttagtttctctagggagaaatcgcagctatgcccattcattcttgtgcttgctcctggctaagctagcctgcaaatggttattgtatggaacagtgtaaatatgccagcccattccttctgtcaatatacaattgttgcattttttagg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0726500, RefSeq:Os03g0726500