Os03g0727200

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Revision as of 12:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0727200| Description = Similar to HOS13 protein (Fragment)| Version = NM_001057676.1 GI:115455080 GeneID:4333975| Length = 5989 bp| Defini...")
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Gene Name

Os03g0727200

Description

Similar to HOS13 protein (Fragment)

Version

NM_001057676.1 GI:115455080 GeneID:4333975

Length

5989 bp

Definition

Oryza sativa Japonica Group Os03g0727200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30388589..30394577

Sequence Coding Region

30388744..30389285,30393048..30393186,30393367..30393378,30393415..30393533,30393832..30394117

Expression

GEO Profiles:Os03g0727200

Genome Context

<gbrowseImage1> name=NC_008396:30388589..30394577 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30388589..30394577 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcttgaaggccaccggggtgaaggccggctgcctcctcctcctccgttgctgccgtttcccaaggtctccgtgcaagtctacaccgttcctagctcgtccaccgccgcctccgccgccgctgcaggcggagctcgtcaggctgttgcaccggcgacgcgggacggcggcgacggcggcggccgcgccgccggagttcttgacgaccctgtcaaggccaggatcgtctcccaccctcgctaccaccgcctcctcgccgccttcctcgactgccacaaggttggctgcccggcggaggcggccgaggagatcgcggcggcggcgcgggtgcgggaggcgcggcagcgggcggccgcggcggcgagccgcatgccgccggcgccggaggacccggagctcaaattagtaactgaggattactgcaagctgctcgtggagtgtaaggaggagctcagccggccgctccaggaggccgaggagttcctcaggacggtggagtcagagctcaactccatcaattctgggccaccccttacagctctaatctcagaatccaaagccggcctcgattcgtcggacgacgacgaacacgaagacggcagcggcatggagatgatggaggccgcggaagacgaggacctcggcatcatcgaccctcgctccgacgacaaagcgctgaagaggcacctgctgaggaagtacagcggttacctgggaggcctgaggaaggagctgtcgaagaagaggaagaaagggaagctccccaaggaggcgaggcagaagctgctcacctggtgggagctccattaccggtggccgaacccgtcggagatggagaagatcgccctcgccgagtcgacggggctggagcagaagcagatcaacaactgtttcatcaaccagcggaagcgccactggaagcccacggaggagatggagttcgccgtcatggaggcctaccaccaccagagcaccgatgccgcggcggcgttctacgtcgacgtcgacgcccgcctcgtcggagcgacggcggcggctccggcatcggccgtgtacaccgccaggccggatcatggcgtgtggcgcgcatag</cdnaseq>

Protein Sequence

<aaseq>MEELEGHRGEGRLPPPPPLLPFPKVSVQVYTVPSSSTAASAAAA GGARQAVAPATRDGGDGGGRAAGVLDDPVKARIVSHPRYHRLLAAFLDCHKVGCPAEA AEEIAAAARVREARQRAAAAASRMPPAPEDPELKLVTEDYCKLLVECKEELSRPLQEA EEFLRTVESELNSINSGPPLTALISESKAGLDSSDDDEHEDGSGMEMMEAAEDEDLGI IDPRSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPN PSEMEKIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVMEAYHHQSTDAAAAFY VDVDARLVGATAAAPASAVYTARPDHGVWRA</aaseq>

Gene Sequence

<dnaseqindica>5293..5834#1392..1530#1200..1211#1045..1163#461..746#ataaaaacaagccattcaaaattattacaccagccattacaccagctgcggccggctgcttttatctgatttgacaatggacgtgacggccacccgacctctcttttcctactagctctcccctaccctacccctctttccttctagcagtagcctctactacagtctacacaccctctctatgcaaaacgcaatctcatctctgtgcagccactcatccgatatttccccccatttcttttcctctccactgtttccctcctcctttaattattcccccccacttcgcctagctttacaaacccccacaaatcgtcattctaaccaaaagaaatcagcaggattagccctagctaagtactcccaatagctgtgataaactgataattagccttctcttcttccttgctgagctggtcggtgtcgtgtaccaagaaaccctcatcaagcacatacgctaatggaggagcttgaaggccaccggggtgaaggccggctgcctcctcctcctccgttgctgccgtttcccaaggtctccgtgcaagtctacaccgttcctagctcgtccaccgccgcctccgccgccgctgcaggcggagctcgtcaggctgttgcaccggcgacgcgggacggcggcgacggcggcggccgcgccgccggagttcttgacgaccctgtcaaggccaggatcgtctcccaccctcgctaccaccgcctcctcgccgccttcctcgactgccacaaggcacgatgaacacatgcgccgcgcatgttcttgatttgtgtgtgtagatcggggttttaaatctcccgctaaactgccgctatctcccattataacggttagagaatggttctaactatttgctctcatcatgtataatttagccgctatagctccatttaacccgttataacggttcgagaagctaaccgctaaatgcacattgttgtagatcatagagatcgatggatgtatttgcccatgttgcaaacttgcaattcgcatgcatgtttctaattaacttgtgatatgcctgtaggttggctgcccggcggaggcggccgaggagatcgcggcggcggcgcgggtgcgggaggcgcggcagcgggcggccgcggcggcgagccgcatgccgccggcgccggaggacccggagctcgaccagttcatggtctgcagcattatgaaagagctcaaattagtaactgtagtgtacatgattacatcaactagacatgacatgatgcactgtgtaatttagtaactacagtactataagatggaatagatgattagagatcttgttaagggcggcgttttacttgggttaatctgctgtgtggttaatcattaacgaataattaatgacgtgacgtgttggcatcaggaggattactgcaagctgctcgtggagtgtaaggaggagctcagccggccgctccaggaggccgaggagttcctcaggacggtggagtcagagctcaactccatcaattctgggccaccccttacagctctaatctcaggtatttgtaacttaacccctttttttttcactcctaccaaaaacacactcgcacgtaccaccacatgcatattacgtacacaaaatgtgtctcctaacacacgttcaaaaataacgagaccaataatacaggtcttgctaaaatccatgcggacatgcaactgtatatatacgtcatacaaatgtgtctctaacacacttaaagagaacccagtaataaacaataacaatgacagaactagaaattaacaaaacctagagctgagtagggctcaactaatgaaatattatttttttctcataaaaatatatagtggattaaaagaatttaaacatgattatggaagcaagcctagggctcaagcccaaactatcctaggcttatctccgcccttgtaacgaacaacccatttcactaaaatcccatctaaaatgtatgcccgcatgagtaattgtgcggtactaatatttaaacatgaggaggaaaaaccatacatctatgacttttaaatcatgagtgcacatcgaatgtgttttatctttgctttgtctttttccacttttttcttttttagggcttatttggtataatttctgctttgggattcttgtccaatagagttagaattgtaccaaacattctcgagattttagataatatagagtgtagttatcgctttgcctattaaaattacactacgagggtggattggcattcacgtcgcttcttaactcagctgcagtctcaaagtaggacgtaccaaagagccccttagctagaggacaacatggctacgagattatgcttaattattatttggattcagcaaaatagtcactagggaggtatacgtggtgtaaattactactccgtacaatagaaaggaacaaaatatatgctttgtgatacgggaattttacatgaattaatttatttgttacattgttggagaaataattgtactcttaagactaagtaattgtactcttaagactaagtacatagaggatatagtttacgtagtatgtttatgtcaaacaaaagatattgaaaacctcaataaacttgttaatttgtgtcttaatgctagtaatatccatctgtccaaaaatgtagggcgttccttttctcatggtctctaactcaatactagcatgaataataaattaagctgtatcgtaaatgtatggagaaactcgtaggattatacatactcttatatctctactcttatactacttccgtcccaaaatatagtcacttttagctataaatctaaacacacagttgtccagatttatagctaaaaatacttatatttcgagacggagggagtatgtaacaatggccaaataattagatattgccggcaacatccatatggaacggttcgatctcgagattgaacttgattatgctccacgttatggtgttttttcttctttaacccctgttagttgtactgttgtaggtattataatttgggcagcctaactaggcataacccatgcattccgtaggattattatgcgatttctatcacaaacatgtagcgtgattgaggtatatgtgggttcatgtgcttccctactgtacgtctgcacctacaagttctaaagatcactagtgttctgattgcctgtacccacagcgacctatcacctacgtccttgacacacgagagttacaaaatcgatgtgttgggggatgtacttggtttgcgtagttagtgaacagtgtcggcatttgtctagctaattgctagctagttatatatgagctatgatcttgttcatgacttgtctcgtccactgtttcttcctttgaaagttagctttactgaattttaatatatgttgagaagcggataagccttttggggcaactcttatgggtggattggtttggaactttggaagtttggatacaagggaatgccacttttatttggacatgactgaataactgtagcattcttccttcttttgggcatctctctagatcttctctcgctagccacaaagtactcttttgcggtaaaaaatatttaacgtttattaggacaaggttcagtcaaaattgtaaatttcgtatcatcaaaaatttctcaaatgattttttttaaaacaaaagaaatgatacatgtagatttgttttgaaaagcactatcataatattataaactttttagattgtatcgacttaatctaatataaaaattaatttatcggaattttaattttttgaccgaatcttaccctaaacgttaaatatttatgatcttcaatgatctagttgtgtaaataattgaaattggtaatacaaataatacatatacgaaagcattccccttgctcaaactcatctagtgtccatactattaaatatggtaccaactatgagcaagtttaatagtatagctaacaactatctataaaattgccacaacatctataactaacctaatagctcattcatacaataattaactacagatatataccacaagattaacaattggcctacctttctctctcccacagcttgttgcaattcttgttacttacagctggctacaaattagtagtcctaaacacaaatatggtgtggtaactcttatagtctacttactgtcatgctcgctctaactaaaacaaaaggtgttgtggacttgtggcagcaaatttaatgaggtaagaacgacaatgttatatatagaacgcacgataacttttttgtaccctgttctctctcatttagctagacatactagtatgccattttaaacttgggcatgaattgatttgtcaaaatgaccctgttccctattgttactacctattgaaaatgataccaaattatgcatgacagagatagctgccctccattagcaagggcgtatatatagaggaaaagagggacattcactagaatttctagagcgtcttgtatataaaattttatggaatatgcagtttcatgtgacagtttgtttttttccttatgttgttccatgcatcttcttagaaggtttcaccttctgttttcccaataatataggcatgggtaaaagcagttgcatatgcagaatcatgctttcgatctaaccattttgtacaaactaaactagcgttcatcgttcttctggacataaaaatcgagctgtagttgtttgtgttatcacttgtgctttattgtaatcctaattgagaaccctctgttctcttacagttgtgcctttagcacatagggactagttagttaggctgtgtttagtttctgaaattggggagaagtttgggaaaagttgttagtttggaaaaaaagttggaagtttatgtgagtagtaaagttttagatgtgatgtgatgtgatgtaaagttgggagtttgggggaagtttggtgtgaactaaacagggccctagagcagattttatattgaagaacgtgtgcatatacagtagcgggaatgtaattgaacgccgcagattttataacaattttatttcattgactcgtgcacttccaaatattttgttgcctagtaattcctgcatttgtttaagcaaaatggcagggaggggggggggggaatagcaccgagtagtatataacagagaaaatgagaactagcattcctagattattattacaattacagctatacgaatcacattgtgcattgtagaaacaattcttggtgcagaactacttaattattcgcgaattcttaatacctttggcttgacaatggcatgcagaatccaaagccggcctcgattcgtcggacgacgacgaacacgaagacggcagcggcatggagatgatggaggccgcggaagacgaggacctcggcatcatcgaccctcgctccgacgacaaagcgctgaagaggcacctgctgaggaagtacagcggttacctgggaggcctgaggaaggagctgtcgaagaagaggaagaaagggaagctccccaaggaggcgaggcagaagctgctcacctggtgggagctccattaccggtggccgaacccgtcggagatggagaagatcgccctcgccgagtcgacggggctggagcagaagcagatcaacaactgtttcatcaaccagcggaagcgccactggaagcccacggaggagatggagttcgccgtcatggaggcctaccaccaccagagcaccgatgccgcggcggcgttctacgtcgacgtcgacgcccgcctcgtcggagcgacggcggcggctccggcatcggccgtgtacaccgccaggccggatcatggcgtgtggcgcgcatagccgttgctcgattcgcccgttgccgccatctggaattaatctgaactgcccttgcctgttacatatagtagggttgttgatgatggtttcatatgtttttccccaaagggaaagtcagcttggacattggaccaatcaagaaatgaaatctcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0727200, RefSeq:Os03g0727200