Os10g0347000

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0347000| Description = X8 domain containing protein| Version = NM_001070936.1 GI:115481615 GeneID:4348377| Length = 4162 bp| Definition = ...")
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Gene Name

Os10g0347000

Description

X8 domain containing protein

Version

NM_001070936.1 GI:115481615 GeneID:4348377

Length

4162 bp

Definition

Oryza sativa Japonica Group Os10g0347000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10684765..10688926

Sequence Coding Region

10685895..10685926,10686997..10687917,10688643..10688724

Expression

GEO Profiles:Os10g0347000

Genome Context

<gbrowseImage1> name=NC_008403:10684765..10688926 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10684765..10688926 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttcttggtggctcaagcgctcctcctcctcgtcgtcgtctccaactccctcctcctcccttccttgggtcttgctgtttcaggtcaagaagcacacgaggtggccatggctggcctccatgatcagcagccgccatctccggcagcggtggctgcgcgtgtatcggtcgctcaagcggacctccccatggtggcctcctcggttcttggggcggagtcctggctcagggcccatgtcctggctcactacccctccaaccacgtcaccgccatcgccgtcgccgtcgcctgcgcccgcggcggaagccgccatggccaagacctccgagcctcgcgcgccgccaagaacctgcaccacgccctcgtgcgctggggcctcgtcgacgaaatcaagatcgacgcctcctccgccccgtgcgccgaggaggtgggaggaggggctctgaagcggaggctgtacggcatgcaccacctgccgccgccgctgccgccgacgtcggtggcgagtccgccgccgcccggcgtgccgttgtccttcgcgccgaacgcgccaccggaggttgtcccgtcggttccgcccgccgctgcgccgccgagcacgcccgtcgtcgtcgtgcctgcgcctgctacaagcccacccatgtcaatgccggctactccgcctgaggcggcggctggcggcatggcgccgtgctcggctccaccgacggcggcgatgtcgccgcagccgtgttccggtgagggagggaacggtggtgggcaatggtgcgtggccaagcccactgtccctctggacaggttgcaggaggcaatggattacgcctgcagccaggatggggtggattgccaggagatttcgggcgggggaagctgcttctacccggacaacatcgcggcgcatgcgtcgtatgcgttcaatagctactggcagaagatgaagcatattggtgggagctgcagctttggtggtactgctgtgcttatcaattctgacccaagttatctccagtgtcgcttcatgatgagttga</cdnaseq>

Protein Sequence

<aaseq>MEFLVAQALLLLVVVSNSLLLPSLGLAVSGQEAHEVAMAGLHDQ QPPSPAAVAARVSVAQADLPMVASSVLGAESWLRAHVLAHYPSNHVTAIAVAVACARG GSRHGQDLRASRAAKNLHHALVRWGLVDEIKIDASSAPCAEEVGGGALKRRLYGMHHL PPPLPPTSVASPPPPGVPLSFAPNAPPEVVPSVPPAAAPPSTPVVVVPAPATSPPMSM PATPPEAAAGGMAPCSAPPTAAMSPQPCSGEGGNGGGQWCVAKPTVPLDRLQEAMDYA CSQDGVDCQEISGGGSCFYPDNIAAHASYAFNSYWQKMKHIGGSCSFGGTAVLINSDP SYLQCRFMMS</aaseq>

Gene Sequence

<dnaseqindica>3001..3032#1010..1930#203..284#gctttgacccagcaagcaagagcgtctagtcacctcaaccacgaacttgaatccgctgctctgctgctgctgctgcaactgttgcgctttgagtgtgactacagtgtctgctactcctactactctgctttgccactacttggttcacaggagggtggcgagagggagagtgtgaggagctgagagagggagagggattgggatggagttcttggtggctcaagcgctcctcctcctcgtcgtcgtctccaactccctcctcctcccttccttgggtcttgctggtaatggtggtctctgcctgctgtgccatgaatgtttcttgttcttgatgctcctgttggttttgctttgtagaatctgcttcttgttttccaccaagaagtttcttggagtttttgcttcattctttttcttgtttttcttccattcattttctgtctttctttacttcgtatactacatgcctacattacatacttttttttgggttcattttatcattgttaggttgttctttatttctttttggagctctgtatttccattgcatagcttcattcgccatttttttttgtgatttcctcatcgttactcgagagatgattgtttcttttacgaacaatgcacttacagtactcgctcgcctcccgtaaaagaaaatttagtactaatgccagtggctatgtaccattatttggttattttttacaaaaacttgcctcaagataaaaattttgattatgtatctgttgttattatgttcccctttcttgcctcctcttttttttttttgagattttcctggttacagtactatctcttttaggtttctttagcaccaaaaaaagttcaaaacttccagactttttgaactctgctccctttgttggcgcaaatgccaattttcttttgcaacttgctccacatcttccatcctgttctcttccagatgttcttgcacagcagcactaatcgtctaatccgtctctctgtgattcttgcacagtttcaggtcaagaagcacacgaggtggccatggctggcctccatgatcagcagccgccatctccggcagcggtggctgcgcgtgtatcggtcgctcaagcggacctccccatggtggcctcctcggttcttggggcggagtcctggctcagggcccatgtcctggctcactacccctccaaccacgtcaccgccatcgccgtcgccgtcgcctgcgcccgcggcggaagccgccatggccaagacctccgagcctcgcgcgccgccaagaacctgcaccacgccctcgtgcgctggggcctcgtcgacgaaatcaagatcgacgcctcctccgccccgtgcgccgaggaggtgggaggaggggctctgaagcggaggctgtacggcatgcaccacctgccgccgccgctgccgccgacgtcggtggcgagtccgccgccgcccggcgtgccgttgtccttcgcgccgaacgcgccaccggaggttgtcccgtcggttccgcccgccgctgcgccgccgagcacgcccgtcgtcgtcgtgcctgcgcctgctacaagcccacccatgtcaatgccggctactccgcctgaggcggcggctggcggcatggcgccgtgctcggctccaccgacggcggcgatgtcgccgcagccgtgttccggtgagggagggaacggtggtgggcaatggtgcgtggccaagcccactgtccctctggacaggttgcaggaggcaatggattacgcctgcagccaggatggggtggattgccaggagatttcgggcgggggaagctgcttctacccggacaacatcgcggcgcatgcgtcgtatgcgttcaatagctactggcagaagatgaagcatattggtgggagctgcagctttggtggtactgctgtgcttatcaattctgacccaagtatggcttccctaacctgtgttttggatgaatgaatgttcattggttaactgcttgttgtttatacattctctattcagttcttctgttggttgacttgtgtcttttttttttgttgctgatgcatattatatgataggtgaatatctgtgctattaatctgtttgtgctactgatatttagtatataactgaaaagcattctttcttgtttagataatactactgaatagcatacttggagcacaataagattggtagtacttttttccattactttgtagaatgtctattttagagtcaagatgttgtggcatttataacttatctttgttaagctgtttatgttgtaatagcttttgatattattgttttatgtgattgtcatgttccactcaaccagctaccaggcattacaagatataatttttgagctaaaattttcttatcgtgattagttttcagtttttgtttttgagtttttaatgatatgtttgtgccatgccagtttatttcttcaactttaccagcagttgtttaacttaaatcgtgggcatttcttgttgtttaacaatatagatggatgaaactgttttgtatctattctaagtcagaatcctatttatgcacatgttatttgatagtacttcttaagtggagttgagtttgtcattgttattgttaggactgaacactgtgtatgagtgcaagaaacttgtcatttttgctttctgtatcctgtattcttctttgttgtttatcaaatggctcgagccatatagtgtttatcatagtgttttttttaaaaaaaatatgactgatgggatctagtcagatgatgtggcaagtgccttatcagatttatggtggattatttctggtgtgctagccttttgaaatttatatccaattatccaaatacatgtttgggtaagtttgtaataatgaactgagagcttagatatatgtttagcacacaataagttggtagagcacttactgtttcatcatcacattacactgtcttcctttctagaggttaggtgctgctctaacagaaattatttgcaggttatctccagtgtcgcttcatgatgagttgaaaaatgctgaacttgaatcttctatttgggttagtattctcctacttgatttgagtggatattactcagtgtttgtattacattactgttcagtgctcccttggaagtgagagatatgggtatcaatctgttatattatttttagtcctgtaaaacactttggtcatctttgcatgcttgcgtatagccttctgttaaactgagcttcatatatgcagaaattatgctgtgacagttcaattgttttgaaaaataaactttgtcaataccagttccttaatcaaataactacgtaatttctgataacacaactgggtcaggtctcctgatgtaattgagtagtatttaatatctctgtggttctacctgcccttttgacaatttttgttcattgctcacatgcactgtctaccataccacttgcatctcaaaccttctgataagtcgctaatctgattatgaatgttgaaatcaaatctaaagctgtctgtgcaaaatttctctttacaatgtaatatccattttctatcgaacttgatggtccatttgttttatggcatctactgcaaaatggtcgaatgactagaatggatagtttggacttgggaccattgctaattgtgcttgacctgcttttctcatcttatttttaccatgttaactctgcacttctcctaagggggaaaaggttcatgcttatttacaatccaattgatattgacatattgttttctcgaccaatttgtcgattcgcactgtatttcaaagatgccaaatcaccgatattctttgcaggttcgttgagcgaagcgaagatctggatctcttgatggccgatggttgcattgtgctgcgaaacatcaagtctcattttttttgcccatccggggtcctctgttaggacgccgtgctgatgtaggattgctatatgttaaaagtcagattagatgcatagtttcgtctgattactgttagagcacaatttctctgcttggctcatggtggcctggaggtactcagcatcttgctgctggccacacgatgattatgtaaggcagaaaagatacctcaattggaacctgcatgctgatgttatgtccagtttattctgaagtattgtttcatttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0347000, RefSeq:Os10g0347000