Os03g0729700

From RiceWiki
Revision as of 12:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0729700| Description = Protein of unknown function DUF558 family protein| Version = NM_001057692.1 GI:115455112 GeneID:4333992| Length = 28...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0729700

Description

Protein of unknown function DUF558 family protein

Version

NM_001057692.1 GI:115455112 GeneID:4333992

Length

2813 bp

Definition

Oryza sativa Japonica Group Os03g0729700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30591859..30594671

Sequence Coding Region

30591861..30592039,30592086..30592186,30592522..30592597,30592867..30593009,30593097..30593143
,30593222..30593330,30593410..30593471,30593837..30593951,30594421..30594581

Expression

GEO Profiles:Os03g0729700

Genome Context

<gbrowseImage1> name=NC_008396:30591859..30594671 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30591859..30594671 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agtgcaccgccgccgctacatccgagggtgcttcgtgccttcgtctgctcgcttcatctgctgggcggtggctcggctgctccggctccggctccggggagaatccggcgtgagcgattggggagtgggcctgcctcgacggcgttgaagcgggaccgccgggatgtcgccagccgccacctcctcgtcgccgccgccgcgcgagcgcacagcacggccggcgggagccgcgcgcgcggtggcctgccccgtttccattccccgacgctcccttcgtccaagggtgaagaggttcgaatccaaggagacgaattctggcacatgacaagagtcttgcgccttggcataaatgacagggttgaactatttgatggcgcgggtggtttggttgaaggatctatacaaaaagttgacaaaggcggttcagatgtgaagttgcttgaggatgctagactcattgctcctgatggcattcaatggcatgtttatgctgcatttgggacattgaaaggtggacgtgcagattggcttgtagagaaatgtactgagcttggagcttgtagtgttacacctcttcttacagagcgatgccatacaatagcagaaaatagagttgacagattgcaaaggcttgtgttagctgcagttaaacaatgccagagaatacatggaatgttgctgaatcccccaattcagatagctgaccttcagcctgttgtatcacagtcaaagctcgctttcgtagcttcagcagaatcacctcctcttttaagcactttgccgaagtcctgcaatgaagaaagtgggcttttgattgttggaccagaaggagatttcacggaagaggaggtaaacgttttgaaagcatcaggcgctgttcctgtaggtcttggtccatgcagactacgagttgagacagccacaatttcactgctatctgcgctcatgctgtggtcagatgctcatcgccaggaaacactgaaatgcaggtag</cdnaseq>

Protein Sequence

<aaseq>SAPPPLHPRVLRAFVCSLHLLGGGSAAPAPAPGRIRRERLGSGP ASTALKRDRRDVASRHLLVAAAARAHSTAGGSRARGGLPRFHSPTLPSSKGEEVRIQG DEFWHMTRVLRLGINDRVELFDGAGGLVEGSIQKVDKGGSDVKLLEDARLIAPDGIQW HVYAAFGTLKGGRADWLVEKCTELGACSVTPLLTERCHTIAENRVDRLQRLVLAAVKQ CQRIHGMLLNPPIQIADLQPVVSQSKLAFVASAESPPLLSTLPKSCNEESGLLIVGPE GDFTEEEVNVLKASGAVPVGLGPCRLRVETATISLLSALMLWSDAHRQETLKCR</aaseq>

Gene Sequence

<dnaseqindica>3..181#228..328#664..739#1009..1151#1239..1285#1364..1472#1552..1613#1979..2093#2563..2723#aaagtgcaccgccgccgctacatccgagggtgcttcgtgccttcgtctgctcgcttcatctgctgggcggtggctcggctgctccggctccggctccggggagaatccggcgtgagcgattggggagtgggcctgcctcgacggcgttgaagcgggaccgccgggatgtcgccagccgccaccttctcggcgctgctccgcgggctgccgccgccgcggggccggcgcctcctcgtcgccgccgccgcgcgagcgcacagcacggccggcgggagccgcgcgcgcggtggcctgccccgtttccattccccgacgctcccttcgtccaaggcaagcgcgcgcttcattcattgtcccctgctcggctgctcgacacgtccatctgggtcggcgtggtcatttcgtcgagcacctcgtgctcaataggttcagcatgtcgtaagctttcttggtagttggtagactatgaccactagagaaatgttcgtccccgttgtcgtgggaagacattgtctgtcgtgtagactgtagagtgtagagcgctgttccttcacttaccccataggcattttgccgatcaggtggtgtgcgtgggttttctgcgtgatgttccattccttaatatcagctgtatgcctgtatctaatataggtatttcctttcagggtgaagaggttcgaatccaaggagacgaattctggcacatgacaagagtcttgcgccttggcataaatgacaggtctgtcttattgctctgcatgagtgtaaatttgctgcggtgaattccagcttcaattcatcaatgctagattatttagtagaaattctatccaccgctgatcctaagagtccgaagtttggaaataatttgattgctgcatatgttcatatgataagccatatgtgtaaaattttcagcttttacttcgaggcaccaaatttatttatttattatgagtctgattactatttgtgtacatattgaaactttatatgaaaacttggaagggttgaactatttgatggcgcgggtggtttggttgaaggatctatacaaaaagttgacaaaggcggttcagatgtgaagttgcttgaggatgctagactcattgctcctgatggcattcaatggcatgtttatgctgcatttggtgagtcccataaattatgcgcacttactgtgaatacagggtagttttcttctccatagcttaccattttataattccattccccagggacattgaaaggtggacgtgcagattggcttgtagagaaatgtactgtatgttatgtacaattttgggtgtcttgtctcttcacaatctacttctaaacattattttactctttctctgtttaggagcttggagcttgtagtgttacacctcttcttacagagcgatgccatacaatagcagaaaatagagttgacagattgcaaaggcttgtgttagctgcagttaaacaatgtatgtgtctctgttggcaccaagatttcagagcaaaatgaactgaaataaattgacagcattactcttgtttctttaggccagagaatacatggaatgttgctgaatcccccaattcagatagctgaccttcagcctgttgtaagtgttcacatatgctttattatctttgcacataacattgtaactttgttacctagttcatgcattggatagtaagagttttgtatggatccagtaacttgcttttttataaagtgggcaagcatgatattgacctttgttgagcaaatgttctaggtcaaagcgcaataatctttagtactgcattgtggagtgaatggtcatgatgcattgtgcagtgaaaattttgttaagaataaaacataggaataaaattttaatgtatgtactagaatgtagaactaccagagtcattattgcatcttcttttacaccacgatgtgtgattgacaaagtcatattattgtgttatctatcatcaggtatcacagtcaaagctcgctttcgtagcttcagcagaatcacctcctcttttaagcactttgccgaagtcctgcaatgaagaaagtgggcttttgattgttggaccagaaggaggtaagtctaactatagattagattcatgtctaattattaaaataataagatcattggttagggtaaacatgtgattttcagtattcttgtttcttgcttgtatcaaatgtgcacttcacgattttgatgtgatattagttgtctgtgctttatgaagtgaatgctttatgtagggccaaaagaaaaacacacacaataatgtcaaagatatgttcttgcagtagcataatgaacagtagtaaatttatactggtatttattaatgcagttcagtagtgggattacatcgagtttccttaagcatgctagattttaaaacacaaaatataattttgaggattgaactatgcgaataattaatggcttttgaatttggcccgaaaaatctggggtccaaaataaaccaatgtcagtagtattatttcactggaactaatatgctttgttttctcaacctccatttcatcagatttcacggaagaggaggtaaacgttttgaaagcatcaggcgctgttcctgtaggtcttggtccatgcagactacgagttgagacagccacaatttcactgctatctgcgctcatgctgtggtcagatgctcatcgccaggaaacactgaaatgcaggtagtcaatgtagagctgtcacccatgtgctactttatactcgcattatgtccaaaccttttgaggtgatatcctcttaagcaagacattttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0729700, RefSeq:Os03g0729700