Os03g0736300

From RiceWiki
Revision as of 12:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0736300| Description = Similar to CEL6=CELLULASE 6 (Fragment)| Version = NM_001057727.1 GI:115455182 GeneID:4334029| Length = 3368 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0736300

Description

Similar to CEL6=CELLULASE 6 (Fragment)

Version

NM_001057727.1 GI:115455182 GeneID:4334029

Length

3368 bp

Definition

Oryza sativa Japonica Group Os03g0736300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30944862..30948229

Sequence Coding Region

30945188..30945592,30945683..30945855,30945933..30946068,30946309..30946773,30946918..30947225
,30947647..30948022

Expression

GEO Profiles:Os03g0736300

Genome Context

<gbrowseImage1> name=NC_008396:30944862..30948229 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:30944862..30948229 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcgggcgggacccgtggggcgggccgctggagatctcgaatgcggactcggcgacggacgacgaccggagccgggacctggacaggggggcgctgatgcggcagctggacgagacgcagcagagctggctcctggccgggccgggcgaccaggccggcaagaagaagaagaagtacgtcgacctcggctgcatggtcctcgaccgcaagatcttcatgtggaccgtcggcaccatcctcggcgtcggcctcttcatcggcttcgtcatgatgatcgtcaagctcgtcccccacaagcgcccccctcctcctccccccgaccagtacacccaggccctccacaaggccctcatgttcttcaacgcgcaacgatctggtccgctgccgaagcataacggcgtcagctggagggggaattcttgcatgaaggatggcctctccgacagcaccgtccggaagagcttggtcggaggcttctacgacgcaggagacgccatcaagttcaactaccccatggcctggtccatgaccatgctcagctggagtgtgatcgagtacaaggccaagtatgaggcgatcggtgagctcgaccatgtcaaggagctgatcaagtggggcacagattacctcctcaagaccttcaattcatcagccgatactatcgatcggatcgtcgcacaggtgggtgtaggtgacacctcaaaaggtggtgcccaacctaatgaccactactgctggatgaggccagaggatatcgattaccccagacctgtcactgagtgccactcttgctcagatcttgcttccgaaatggctgctgcccttgctgcagcttccatagtgttcaaggacagcaagacttactctgacaagctcgtgcgtggcgcaaaggccctgtacaagttcggtaggctgcagcgtgggagatacagccccaatggctctgatcaagcaattttctacaattccaccagttactgggatgagtttgtgtggggtggtgcgtggatgtactttgccacagggaacaatacatacctatcggttgcaacagctccggggatggcaaagcatgctggagcatactggctcgatagtccgaattatggagtttttacctgggatgacaagcttccaggagctcaggttcttctgagcaggttgcggcttttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagacaatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaaggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgcggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggtattgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacagctcgattatgtcctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggttgctggccctgataggcatgatggcttcaaagatgtccgtacaaactacaattacacggagcctactcttgcagcaaatgctggcctggtggcagccttgatttccctaactaacattcacgtcaaaagtggaatcgataagaacaccatcttctctgcagttcctccgatgtttccaactcccccacctccaccgtcagcttggaaaccatga</cdnaseq>

Protein Sequence

<aaseq>MFGRDPWGGPLEISNADSATDDDRSRDLDRGALMRQLDETQQSW LLAGPGDQAGKKKKKYVDLGCMVLDRKIFMWTVGTILGVGLFIGFVMMIVKLVPHKRP PPPPPDQYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGF YDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHVKELIKWGTDYLLKTFNSS ADTIDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAAL AAASIVFKDSKTYSDKLVRGAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWG GAWMYFATGNNTYLSVATAPGMAKHAGAYWLDSPNYGVFTWDDKLPGAQVLLSRLRLF LSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGGMIQLNHGRPQPLQYVVNAAF LASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKY PKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDVRTNY NYTEPTLAANAGLVAALISLTNIHVKSGIDKNTIFSAVPPMFPTPPPPPSAWKP</aaseq>

Gene Sequence

<dnaseqindica>2638..3042#2375..2547#2162..2297#1457..1921#1005..1312#208..583#aggccccagatccctccaccccatcgcacgccacaacataacataacaccgcaaacacgcaccctcccaacagacgcctcctcccctccctccctcccacctacactccgctgcgcagccagcttcgctcgcccgctacctcactcactctcgggtgagcgcggccaccgctgccggcgacgaggtagggaggaggaggagggcaagatgttcgggcgggacccgtggggcgggccgctggagatctcgaatgcggactcggcgacggacgacgaccggagccgggacctggacaggggggcgctgatgcggcagctggacgagacgcagcagagctggctcctggccgggccgggcgaccaggccggcaagaagaagaagaagtacgtcgacctcggctgcatggtcctcgaccgcaagatcttcatgtggaccgtcggcaccatcctcggcgtcggcctcttcatcggcttcgtcatgatgatcgtcaagctcgtcccccacaagcgcccccctcctcctccccccgaccagtacacccaggccctccacaaggccctcatgttcttcaacgcgcaacgatgtgagtttttttcactcctttcctccctccgtctccatctctgtctgcatcagaagaagaggaggaagaagatttcagaattcagatccggttttgcacggcaatgtcgtgcgaaaaagacgggcacttgcagctgtctctcccctgtctcggagtggcctctgctgcctcactctgtttctacatttagcatgtctttgttgctaaaagatctggtcatttgcactaaattacccccacatatattctctccacgcatgtttaaccagatcacggtccacgtgcaataaactactgtcaaaatgacatttttttcctcggtcctggatcttgagagaggatgaacaaaagtcaatgtgaattcgaattcatataagcaaattctgctcaccttctgacgatgtatcgttctgaatgtcagctggtccgctgccgaagcataacggcgtcagctggagggggaattcttgcatgaaggatggcctctccgacagcaccgtccggaagagcttggtcggaggcttctacgacgcaggagacgccatcaagttcaactaccccatggcctggtccatgaccatgctcagctggagtgtgatcgagtacaaggccaagtatgaggcgatcggtgagctcgaccatgtcaaggagctgatcaagtggggcacagattacctcctcaagaccttcaattcatcagccgatactatcgatcggatcgtcgcacaggttggtagaagccgaccatctgttaatcctgagttttcactttcctgtcccaagaaataaggcgtcagatccactcaaatatgtagagtaaacttcacagcagattttctaaatcattggtatcatatgaacttcttattgcaggtgggtgtaggtgacacctcaaaaggtggtgcccaacctaatgaccactactgctggatgaggccagaggatatcgattaccccagacctgtcactgagtgccactcttgctcagatcttgcttccgaaatggctgctgcccttgctgcagcttccatagtgttcaaggacagcaagacttactctgacaagctcgtgcgtggcgcaaaggccctgtacaagttcggtaggctgcagcgtgggagatacagccccaatggctctgatcaagcaattttctacaattccaccagttactgggatgagtttgtgtggggtggtgcgtggatgtactttgccacagggaacaatacatacctatcggttgcaacagctccggggatggcaaagcatgctggagcatactggctcgatagtccgaattatggagtttttacctgggatgacaagcttccaggagctcaggttagcatacttcacacctctgtactcagtgcactggttagctagaaccacattgcagttagtgtaaaatgacagaagaaggataaggtaatctgaatgagaaaatatacaagtgttttagaaggtgcaggaattaaccaaaaatgatttgcatagagaagggtggttaatggtatacttcaatactgcagcgatactgtgatagtgatccacctctaacattgtttctactttattcaggttcttctgagcaggttgcggcttttcctaagtcctggatatccttacgaagaaatactgagaacatttcacaaccaaacagacaatgttatgtgctcgtatctgccgatgtacaattcattcaactttaccaaaggtcggtgctgttccccctttgcctctctttttttctctctagccacaaatggaagttaaacaatgggaggtttacaggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgcggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggtattgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacaggtaaggttttgttgcccatgctcttgaagtagtcaaagctacattagcacagttcggtgaatttgacacccaaaacccttcaatttgcagctcgattatgtcctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggttgctggccctgataggcatgatggcttcaaagatgtccgtacaaactacaattacacggagcctactcttgcagcaaatgctggcctggtggcagccttgatttccctaactaacattcacgtcaaaagtggaatcgataagaacaccatcttctctgcagttcctccgatgtttccaactcccccacctccaccgtcagcttggaaaccatgaagagtcagatcgctgaatatttcttgagcatcaaacggagggaacgacagatgtttgtttggtacagcaaaggacacatacagaaagcagacaacataagcttacagagcctctattttctgtatcagtatgacagatcggtataaattcatctgtcgacaatagaccgggatgttgtgtgcaccttgtgaaactaatttttggggtccttgttgttattcgttcagagctcatgtgtgaagttctttttgtagaaatggaacctttataaaccgttttataggagtgactttatcatcatactaaaggatttgtgtaacctttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0736300, RefSeq:Os03g0736300