Os10g0350500

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0350500| Description = Nucleoside phosphatase GDA1/CD39 family protein| Version = NM_001070943.1 GI:115481629 GeneID:4348384| Length = 4431...")
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Gene Name

Os10g0350500

Description

Nucleoside phosphatase GDA1/CD39 family protein

Version

NM_001070943.1 GI:115481629 GeneID:4348384

Length

4431 bp

Definition

Oryza sativa Japonica Group Os10g0350500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:10894508..10898938

Sequence Coding Region

10895059..10895339,10895905..10897732

Expression

GEO Profiles:Os10g0350500

Genome Context

<gbrowseImage1> name=NC_008403:10894508..10898938 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:10894508..10898938 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggctgtcttcttcacttcaagatttgcctacgttctcaagaattgatgcattagaaaggggctctagcactggtagtgatttggtctcagggcgtgcaaaacctatccgcacacttcaaagagatggcgctgttgcaagcttttcaaaagagaaaacacccccctcatcaccaacaaatcgaaagaaatgcatgagagctgctggttgtgctattgctctgttccttttggtgttctttatatatgcttctttgagatatttccatgtctttctctcggaaggaagccctgaatactatgttattcttgattgtggaagcactgggacaagagtgtatgtttacgaatggtctgttaaccatgacgatggaaacacatttcctattgctttgaaacccttaggaaatgctcctaagaaaaaatctggtaaattaactgggcgagcctatcagcgaatggagactgaacctgggttgaacaaacttgttcacaatgaaactggattaaagatgacaatagagcccctccttcgaatggctgagaagttgattcctagacgtgcacacaaacacacgcctgcttttctatatgccacagctggtgtgcgcaagctaccgagtgcagattctgagtggcttctggacaaggcttgggatattctgaagaattcatcgtttctgtgttctagagacagagtcaagattatcagtggcatggatgaagcttattatggatggatagctcttaaccatcatttgaatatgcttggcacctcatcttctaaaatgacatatggttcacttgatttaggtggatcatcattacaggtgacatttgagactgataattccattcaggatgaaacaagtatgagtctaaggattggttctatcagtcatcaacttagtgcttattctctgtctggttatgggctaaatgatgcatttgacaaatctgttgcacatcttgtgaagaagttgggaggggcagctggtaatggaaaagttcaggttaagcatccttgtctacaaacgggatacaaagaagattatatttgttcttactgccacccgctcaaactagatggaagtcccagtgttggagggaagacaacaggcaaagagaagcagggaatggcagttgaactgatcgggatgcctcagtggaacgaatgtagtgcccttgcaaaattaacagtgaatctttctgagtggtccaatgcaagctcagttgactgcaacactaaaccttgtgctcttcctagtacctttccgcaaccacatgggcagttttatgctatgtctggtttctatgtggtttttaaatttttcaatttgactgccgatgccactctcattgatgttctaaatagaggccaggaattttgtgaaaaaacatggaaggttgcaaagagtagtgttccaccacaaccttttatagaacagtattgtttcagggctccttatattacatcacttctgagagaggggctgcagatcaaagataaccaggtgataattgactctggtagtataacttggactcttggggttgctttgttagaggctggacaggtgttgtctacacgaatcgatattcaaggatacagaatactccaccgagagataaatccaaatattcttattgtgttgtttctgatttcaattgtgttagtcatatgtgccatattgtgtgtcagcaattcaatcccaagatcattccgcaagtcttatctgccactttttaggcagaacagtgcaggcagtcctgtgcttagcatgggatcacctttcagatttcatctatggagtcatattacttcaggtgatgcaagaacaaagacacctctgagtcctactgttgctgggtcagagccccatccattcagcatgagccatggattaggaggcagcagtgttcagcttatggagtcctccaggcagtcattgggcgtctatcacagctattctgttggaagcttaggtcagatgcagttttctagtggaatgtggaagccaggtcaaacaacactccaaagtcggagatcccaatcgagagaagatctcacttcgtcactagccgatcttcatcttccaaaggtgtag</cdnaseq>

Protein Sequence

<aaseq>MRLSSSLQDLPTFSRIDALERGSSTGSDLVSGRAKPIRTLQRDG AVASFSKEKTPPSSPTNRKKCMRAAGCAIALFLLVFFIYASLRYFHVFLSEGSPEYYV ILDCGSTGTRVYVYEWSVNHDDGNTFPIALKPLGNAPKKKSGKLTGRAYQRMETEPGL NKLVHNETGLKMTIEPLLRMAEKLIPRRAHKHTPAFLYATAGVRKLPSADSEWLLDKA WDILKNSSFLCSRDRVKIISGMDEAYYGWIALNHHLNMLGTSSSKMTYGSLDLGGSSL QVTFETDNSIQDETSMSLRIGSISHQLSAYSLSGYGLNDAFDKSVAHLVKKLGGAAGN GKVQVKHPCLQTGYKEDYICSYCHPLKLDGSPSVGGKTTGKEKQGMAVELIGMPQWNE CSALAKLTVNLSEWSNASSVDCNTKPCALPSTFPQPHGQFYAMSGFYVVFKFFNLTAD ATLIDVLNRGQEFCEKTWKVAKSSVPPQPFIEQYCFRAPYITSLLREGLQIKDNQVII DSGSITWTLGVALLEAGQVLSTRIDIQGYRILHREINPNILIVLFLISIVLVICAILC VSNSIPRSFRKSYLPLFRQNSAGSPVLSMGSPFRFHLWSHITSGDARTKTPLSPTVAG SEPHPFSMSHGLGGSSVQLMESSRQSLGVYHSYSVGSLGQMQFSSGMWKPGQTTLQSR RSQSREDLTSSLADLHLPKV</aaseq>

Gene Sequence

<dnaseqindica>3600..3880#1207..3034#gccggtctcctcccctccgccgcagattcctccctccgtcgatcgccccttcatcacccagccctctcacccttgctccctccctcccctaaccctaatctcatccgcgccgccgccgccggtactgcggatccccgatccgtcgcccgcctccactcagctgccgccgcctccaagacgtcgtcaccaccacctccatccgccacgacgcccccacaacctccgtccgcgccgaccccacgctgccccacaccgcccggtccttcgtcgacgcgccgccgttgcgggcaccgcccccgcccacatcgccgcctcgccccaactgctccgccccaccgcgccgcgcgggtgctcccaatcctcgccgccgctggccccgcgccgccggggggtgggcggcgatggaggcatagaccggcccgccgcgacgggtaagtcgtcggtgtccccccccccccttcccggccagatccaatccggcagcttcgatgccgggtttctgtggtcgcgtgtcggcaatctgcgattagatcttaggttgttcgggggtcggtggctgggatcgggcggtttggtgtggtggaggacgcgatcctgggtgctggaatcgaggggaagctggcgtgtttgggggcgggcgcgttgctgcgatccttgagtttttgcctatgggtggtagtgtgtagccgggagttcgtcgtcggtggtgacctgtttctgttgtagtgtcggtgggatgatgcatatgaatactagcagtttaacgtgggggcactgagttagtatcaggatttagggaaaacctggtttagcatgtgagttgatttgcagatattactgatatttatatagtgttaatatatttcctaagattaggaatttaggatgcatctattttcttcaatgctagtgttgcattggtgttgtaggaaagtttttcttatgcctgataacgagagtgttgttagttagtgcggagcatctttcaaattttagctttattcatatgtggtttaccacgttagtatattctaactatggaattttcttgcaggcagaggcggtgcaaaggcgctattgaattaatttactctggttatttatgctgcatccttatgacttctgtttgccaagattccaactgcttatttgcccttaccagtgagatcttataataattgccaccctgactacaaagaagcaactatgcggctgtcttcttcacttcaagatttgcctacgttctcaagaattgatgcattagaaaggggctctagcactggtagtgatttggtctcagggcgtgcaaaacctatccgcacacttcaaagagatggcgctgttgcaagcttttcaaaagagaaaacacccccctcatcaccaacaaatcgaaagaaatgcatgagagctgctggttgtgctattgctctgttccttttggtgttctttatatatgcttctttgagatatttccatgtctttctctcggaaggaagccctgaatactatgttattcttgattgtggaagcactgggacaagagtgtatgtttacgaatggtctgttaaccatgacgatggaaacacatttcctattgctttgaaacccttaggaaatgctcctaagaaaaaatctggtaaattaactgggcgagcctatcagcgaatggagactgaacctgggttgaacaaacttgttcacaatgaaactggattaaagatgacaatagagcccctccttcgaatggctgagaagttgattcctagacgtgcacacaaacacacgcctgcttttctatatgccacagctggtgtgcgcaagctaccgagtgcagattctgagtggcttctggacaaggcttgggatattctgaagaattcatcgtttctgtgttctagagacagagtcaagattatcagtggcatggatgaagcttattatggatggatagctcttaaccatcatttgaatatgcttggcacctcatcttctaaaatgacatatggttcacttgatttaggtggatcatcattacaggtgacatttgagactgataattccattcaggatgaaacaagtatgagtctaaggattggttctatcagtcatcaacttagtgcttattctctgtctggttatgggctaaatgatgcatttgacaaatctgttgcacatcttgtgaagaagttgggaggggcagctggtaatggaaaagttcaggttaagcatccttgtctacaaacgggatacaaagaagattatatttgttcttactgccacccgctcaaactagatggaagtcccagtgttggagggaagacaacaggcaaagagaagcagggaatggcagttgaactgatcgggatgcctcagtggaacgaatgtagtgcccttgcaaaattaacagtgaatctttctgagtggtccaatgcaagctcagttgactgcaacactaaaccttgtgctcttcctagtacctttccgcaaccacatgggcagttttatgctatgtctggtttctatgtggtttttaaatttttcaatttgactgccgatgccactctcattgatgttctaaatagaggccaggaattttgtgaaaaaacatggaaggttgcaaagagtagtgttccaccacaaccttttatagaacagtattgtttcagggctccttatattacatcacttctgagagaggggctgcagatcaaagataaccaggtgataattgactctggtagtataacttggactcttggggttgctttgttagaggctggacaggtgttgtctacacgaatcgatattcaaggatacagaatactccaccgagagataaatccaaatattcttattgtgttgtttctgatttcaattgtgttagtcatatgtgccatattgtgtgtcagcaattcaatcccaagatcattccgcaagtcttatctgccactttttaggcagaacagtgcaggcagtcctgtgcttagcatgggatcacctttcagatttcatctatggagtcatattacttcaggtatgtattgagttttttttttccttgacattgctgttactttaaggtgtttcctcatgtaaaaagcatctattgtctgtggggttgggacttaaattctagaagcacaaaatttttaccctgacaattctgttgatactatatgtaccatttctttttctttagtagacgtatagccattggttgctctgcttttttggaaaaccaaataaagtgttatactatatgtctactatatactatgcatcatctctttaattttaaacaatcaaacatctttccattctaaaaaagctgcttcttttttctttttatattaattattatgttggactgaactttttaattatttaatatactattatagaaaagtagtttttgttacttaactctattaacaatgaaggcacaatagtatggaaagagatttctttcattatgtgaagtcaaactatcctgcaatttctgtgtggctgttgcactcgccttttgttttctgtagcttgaggttccgtcctatagacaaaacttttaaatttgcttcgtattgccattctcttcacaggtgatgcaagaacaaagacacctctgagtcctactgttgctgggtcagagccccatccattcagcatgagccatggattaggaggcagcagtgttcagcttatggagtcctccaggcagtcattgggcgtctatcacagctattctgttggaagcttaggtcagatgcagttttctagtggaatgtggaagccaggtcaaacaacactccaaagtcggagatcccaatcgagagaagatctcacttcgtcactagccgatcttcatcttccaaaggtgtagccttacatttcagaatgacatgactagtatgagaataccatcccataacaaaccttgtgtaaataatagctccggactatttgatttcttctctaatcaaaagtcaaattttgtcggtatactgacacttcagtgagatctagcattcacagaattggaggtatgacttggtgcctgctgcctagtcctgggcatgatattttcattacgatgtatgcgcaacagtacatgtcacaaggtgaaattgcaagaagaaatttatatggttcaccaaagtggttggccgtgggctggaggtatataaatcagctcctagccccaaaatgtcactgtttctaaattgtgatatcaattcaaccgagcaggctgtgtacttcaaatgtttcttattcttttgttctacaacataataaagctgcctatgggctatggtcttgtgtctgtagaattgctgtacgacaccatgtaagagttttcccttgtggaaggacatttggtaccaacagaaaacatgaattattagtaattccagtgctcttatgtttactcat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0350500, RefSeq:Os10g0350500