Os03g0740700

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Revision as of 12:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0740700| Description = Protein similar to CwfJ, C-terminal 1 domain containing protein| Version = NM_001057754.1 GI:115455236 GeneID:4334057...")
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Gene Name

Os03g0740700

Description

Protein similar to CwfJ, C-terminal 1 domain containing protein

Version

NM_001057754.1 GI:115455236 GeneID:4334057

Length

5374 bp

Definition

Oryza sativa Japonica Group Os03g0740700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31149774..31155147

Sequence Coding Region

31149927..31150282,31150389..31150599,31151883..31152083,31152168..31152710,31153189..31153265
,31153835..31154186,31154340..31154552,31154642..31154968

Expression

GEO Profiles:Os03g0740700

Genome Context

<gbrowseImage1> name=NC_008396:31149774..31155147 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31149774..31155147 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctctccggcgtcaagtttatcccccgggagcagatcggcgaggatgccctaggcggcgccggctcggcggggtccgacagctccgaggataggcggcggcggaagaagcggggcaggaaggggagggacaaggaggagaggcgggaccggaggcgccggcggaggcggagcaagtacggctcggactccgaggaggggtccgatagcggagactcgatcgaagaggaggaggagaaagggttgagccggagcaagcaccggaggaagcatcagaggcggcgccatgagttctccgatgacgacgatgatgatgacgaggagtccagtggtgaatctgataagagaagaggcaatcgcaagagcaagcttggaggtgccgcaggtgatgatgatgatgaggaggaggaggatgagggaattggaggtgaggagttgagagctagtgatattgtcaggaaggagatgggcctcgaatggatgctcaagtcggcaagcagtggtcgggcggagagcagccaagctggcggggctgacaaagatgaggaggaggttgcacccgaggaggtgaagaaagccaatccaaaggaattgaatccatacctgagggataatggcagtgggtaccctgatgaatctagcccttcaaatgcaggcaaccagttgcttgcttcctctgtggttggtgatggaggtgctagctggaggctcaaagctttgaagcgtgcaaaagagcaagcagctcgtgaaggaaaacaacttgaggaggttgttggtgagagatggggctcgttaggccacttagctgcatcagtgtcagcatctagagctgccccttcgcatgctcatttacatgccattagaggcagaaaagctgggcaagcaggcagctcagaagaacattccaaagaaaatccaaaggagggtcagcaaggtggagacagtggtagacgtgaatacttaaaagatgtttcctctcggcatcatgcaatgagaaaacctaaacctgattctgtaccatggaaaaggaataggcagaatatttcttctgaggatcaggcacttatctcttcagcgatagcaggaatcaataagttctctaatgatggaagctttttggaaaagattaataatcttgaaagcaagactgtaaatgttttgactgcagaggttgatgagctcaagtctgataagggtagctcaaagaaagcaccttcagttagcactcaaaagctaaatgcgaaccagttagcagcaaagattctgcagctccgaatgaaaggcaagcatgaagaagctgaacaactttcgcgagaaatggaggcggtgctggagaatgaggatactgctgttgaagaacctaggcatgaagtgaggagttcaaccaggaacacaataaagcctagtgcagctgatcgcaggaaaagagaagaggatgctgaccggcatcttgcaaataaaattatgcacaataaacagtacaacatgtctaaaagtatagaggatgaatatgattttggtgatgcccccagtaagaaaggcaaaaggaggaacaaagatgcacatgaggagaggagaagcactcattggctcacaactcagaaagagcgctgtatgtattgcttcgagaacccatcacggccaaagcatctggttgttgctataggaaacttcacttacttgatgctgccacagcttgagcctgttgtccctgggcactgcattattctgccattgcagcatgagtctgcaacaagaacagttgatagaagtgtctgggaggagatccgcaactttaagaagtgcctcctgaaaatgttcgcgcagcaggacaaggatattgttttcatggagactgttataagcttggccaaacaacgcaggcactgcatgattgaatgcatccctatcccctccgaagtttcaaacaatgctcccatgtacttcaagaaggcaattgatgaagcggaagaagaatggacccagcatgacatgaagaaacttattccaacaaagggaaacctgcaccaagtcatcccagagaactttgcctactttcatgtagagttcgggctcgaccgtggatttgcccatgtcatagacgatgagagcaaattcagtgcaggttttgggttgaatgtcatcagagggatgctccagttgcgggaagaggacatgcacaggcgccgaaggcatgaatcgatggataatcagaaacaagctgttgctaatttcatgaaggactgggaaccctttgattggaccaaacagcttgattag</cdnaseq>

Protein Sequence

<aaseq>MLSGVKFIPREQIGEDALGGAGSAGSDSSEDRRRRKKRGRKGRD KEERRDRRRRRRRSKYGSDSEEGSDSGDSIEEEEEKGLSRSKHRRKHQRRRHEFSDDD DDDDEESSGESDKRRGNRKSKLGGAAGDDDDEEEEDEGIGGEELRASDIVRKEMGLEW MLKSASSGRAESSQAGGADKDEEEVAPEEVKKANPKELNPYLRDNGSGYPDESSPSNA GNQLLASSVVGDGGASWRLKALKRAKEQAAREGKQLEEVVGERWGSLGHLAASVSASR AAPSHAHLHAIRGRKAGQAGSSEEHSKENPKEGQQGGDSGRREYLKDVSSRHHAMRKP KPDSVPWKRNRQNISSEDQALISSAIAGINKFSNDGSFLEKINNLESKTVNVLTAEVD ELKSDKGSSKKAPSVSTQKLNANQLAAKILQLRMKGKHEEAEQLSREMEAVLENEDTA VEEPRHEVRSSTRNTIKPSAADRRKREEDADRHLANKIMHNKQYNMSKSIEDEYDFGD APSKKGKRRNKDAHEERRSTHWLTTQKERCMYCFENPSRPKHLVVAIGNFTYLMLPQL EPVVPGHCIILPLQHESATRTVDRSVWEEIRNFKKCLLKMFAQQDKDIVFMETVISLA KQRRHCMIECIPIPSEVSNNAPMYFKKAIDEAEEEWTQHDMKKLIPTKGNLHQVIPEN FAYFHVEFGLDRGFAHVIDDESKFSAGFGLNVIRGMLQLREEDMHRRRRHESMDNQKQ AVANFMKDWEPFDWTKQLD</aaseq>

Gene Sequence

<dnaseqindica>154..509#616..826#2110..2310#2395..2937#3416..3492#4062..4413#4567..4779#4869..5195#gctggatcccccttgcggtctcgctacctcttcctctctctcgtcggctcgtcgccggcgcgccacctccgccgccgttgaagccctcgcgttcgccgcttctctcccccaaccaacgaagccctagcgcgttcgcctcgccgcccaccggcgatgctctccggcgtcaagtttatcccccgggagcagatcggcgaggatgccctaggcggcgccggctcggcggggtccgacagctccgaggataggcggcggcggaagaagcggggcaggaaggggagggacaaggaggagaggcgggaccggaggcgccggcggaggcggagcaagtacggctcggactccgaggaggggtccgatagcggagactcgatcgaagaggaggaggagaaagggttgagccggagcaagcaccggaggaagcatcagaggcggcgccatgagttctccgatgacgacgatgatgatgacgaggagtccagtggtgaatctgataagagaagaggcaagtagccctaaacttgtttaggttaggttaggatggtgctttttggtaggatttttgtgagttgtgtttctgatcacctggtattgctgacctcttgttacaggcagtcgcaagagcaagcttggaggtgccgcaggtgatgatgatgatgaggaggaggaggatgagggaattggaggtgaggagttgagagctagtgatattgtcaggaaggagatgggcctcgaatggatgctcaagtcggcaagcagtggtcgggcggagagcagccaagctggcggggctgacaaagatgaggaggaggttgcacccgaggaggtaatgattaccacatctcatgtgagatatgcttatggttcaatgcttgtgtcctagtagctaccttttgccatataattgcaattcagggtagcttattgtagttctttgtggagctgaggccatgtttgtgatggtaatatttccataagctaggtactgcattaatattgtatatgattcaccacttgcagtgaagatgccatgttttaattgttggtagctgaacagtagtcttcagatggtattaggcacttgcatcctatctactcaaattatgaacaatattcccatggtagaatgctattctgcttatggttttatgctaagctatagtagctgaaagttggttcaatgctaagcttgttgtgatcaattcagtgagtgaccgttgctatttagttatgatgttcatacttagatttagatttggtttctttcgttagcaatgacatttagtcaagtaactgctgtataattttcttcatgacgatggatgagtatgttttgtcctgtacgttaactcatattttaataaacccctggaacattcagttgttcagtgcaggaatactatggctgtgtttagttggtgcgccaaaattttttttgaagtatacggacacacatttgaagtattaaacatagactaataacaaaacaaattacagattccgcatgtaaactacgagacgaatctattaagcctaattaatccgttattagcaaatgtttactgtagtaccacattatcaaatcatggcgtaattaggctcaaaagattcgtctcgcaatttatagtcggactgtgcaattggttttttttttgtccacatttgatgctccatgtatgtgtccaaacatttgatttgacggaaaagttagaagtttgaagaaaaaagttggaatctaaacacggcctatgggtgtgttcggcacccccttttccaaacccctccttcgttttccgctcgcacgcttttcaaactgctaaacggtgctttttttgcaaaaaagtttatatacaaaagttgcttaaaaaatcatattgatccatttttgaaaaaaatttagcaaatacttaattaatcacgttctaatgggctgctccgttttccgtgcgtactgtgcacgttgggagccggctgtagcgaacacaccctatatttatatctacggatctgtataagatgtatggaataaatgttttgtttagtgattctaaactctaaactgggatatctctcctgctttgcttacatcaacttcttgggtactgacaggtgaagaaagccaatccaaaggaattgaatccatacctgagggataatggcagtgggtaccctgatgaatctagcccttcaaatgcaggcaaccagttgcttgcttcctctgtggttggtgatggaggtgctagctggaggctcaaagctttgaagcgtgcaaaagagcaagcagctcgtgaaggaaaacaacttgaggaggtatgtccgtcgccacatattattattggaagtgactgacattaggtagtttattcccctaacttctattactattcaatataggttgttggtgagagatggggctcgttaggccacttagctgcatcagtgtcagcatctagagctgccccttcgcatgctcatttacatgccattagaggcagaaaagctgggcaagcaggcagctcagaagaacattccaaagaaaatccaaaggagggtcagcaaggtggagacagtggtagacgtgaatacttaaaagatgtttcctctcggcatcatgcaatgagaaaacctaaacctgattctgtaccatggaaaaggaataggcagaatatttcttctgaggatcaggcacttatctcttcagcgatagcaggaatcaataagttctctaatgatggaagctttttggaaaagattaataatcttgaaagcaagactgtaaatgttttgactgcagaggttgatgagctcaagtctgataagggtagctcaaagaaagcaccttcagttagcactcaaaagctaaatgcgaaccagttagcagcaaagattctgcagctccgaatgaaaggcaagcatgaagaagctgaacaactttcggtaagtattgcattattgttattgtgataacattaacaggcttaccttcttgattcattattagtgtatataatttgtttggaaaataactatacttattacaatatagtaatgaaagtgcagttttgcacatggtttcatttattcatttgaagtaacagaaaatacatgctgttcattgcttttcagtaatggcttagacccctgagctaacatattgctattgaataatggctttgacccctaatttaacatactcttatagtagcatgtaaccatggtcggatccgcatcaatccatgctcaagaatttgcactatgtttatcgctttatgatcaatatacaatttaggatgccgaagcacaatttcttttatatctgaaatagggcatgattaagaaattgaatttccatatgcttgaatatacttgaattagaggtgacaagactttgtaactgctaactattcttgctcagcgagaaatggaggcggtgctggagaatgaggatactgctgttgaagaacctaggcatgaagtgaggagttcaaccaggttagtccatgacgttgttattctgagttagcacattacagatgcctgctttcacacactgtcgtatgatgtcactttgtaaggctaaaaacttgtaaacgccttagtattggtaccttgttattctcccacaatatctgaggacttgaaaagaaatatgtctgcaactgtaaagctatgctgaaatgttctaacagtaatcgttctctcatattgaaatactctcagtttcatattcttaatgtctagtttctagagcatgtgcgtatgaggcatagttgtatagataagaaggggaatggatacagcatgcacttgatctgctcctctgaaatattttggtggccatatgtatgccattttggcatactatgacaaaaaaaaaagtgcaaaacacagggtgcacctgttttgcatagggatattcaaatattttaatgtagacatccaatttattacaaacataagcattacagaaatgacctttctatttcaatgttgtatcagcatatatatactcgtattgtttatctgcttgctgaacaaactattgtttttctaatctgtaggaacacaataaagcctagtgcagctgatcgcaggaaaagagaagaggatgctgaccggcatcttgcaaataaaattatgcacaataaacagtacaacatgtctaaaagtatagaggatgaatatgattttggtgatgcccccagtaagaaaggcaaaaggaggaacaaagatgcacatgaggagaggagaagcactcattggctcacaactcagaaagagcgctgtatgtattgcttcgagaacccatcacggccaaagcatctggttgttgctataggaaacttcacttacttgatgctgccacagcttgagcctgttgtccctgggcactgcattattctgccattgcaggtgagaaaatcattttatgatgtgctttcataacaacaagctaacttcagcttcttgtaattttgaatagtcatatgtaaacccgaccttcattacaactcttatgcactattcatcatctaccttatgatatgttcttttttatggttgcagcatgagtctgcaacaagaacagttgatagaagtgtctgggaggagatccgcaactttaagaagtgcctcctgaaaatgttcgcgcagcaggacaaggatattgttttcatggagactgttataagcttggccaaacaacgcaggcactgcatgattgaatgcatccctatcccctccgaagtttcaaacaatgctcccatgtacttcaagaaggtcggttgtctgttgctttgtccatgattgagaacaatttatttcttatgtgcttcaggttctaacaaaatccaacctatttacttcaggcaattgatgaagcggaagaagaatggacccagcatgacatgaagaaacttattccaacaaagggaaacctgcaccaagtcatcccagagaactttgcctactttcatgtagagttcgggctcgaccgtggatttgcccatgtcatagacgatgagagcaaattcagtgcaggttttgggttgaatgtcatcagagggatgctccagttgcgggaagaggacatgcacaggcgccgaaggcatgaatcgatggataatcagaaacaagctgttgctaatttcatgaaggactgggaaccctttgattggaccaaacagcttgattagatgtaaatacagtcaccagaacctctgtaagaacagccttctggaaattgtacgacgaatttttgtaggaaatgtcatgtcctgtattcatgttaacacatttgtttcttcacctgatactgaatgtagcttaaatctataatttcgaaattgacatcaaccccggccataacgccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0740700, RefSeq:Os03g0740700