Os03g0740800

From RiceWiki
Revision as of 12:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0740800| Description = XRCC4, N-terminal domain containing protein| Version = NM_001057755.1 GI:115455238 GeneID:4334058| Length = 2716 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0740800

Description

XRCC4, N-terminal domain containing protein

Version

NM_001057755.1 GI:115455238 GeneID:4334058

Length

2716 bp

Definition

Oryza sativa Japonica Group Os03g0740800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31158812..31161527

Sequence Coding Region

31158875..31159183,31160283..31160411,31160596..31160718,31161012..31161275

Expression

GEO Profiles:Os03g0740800

Genome Context

<gbrowseImage1> name=NC_008396:31158812..31161527 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31158812..31161527 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacctcgacggcggcgcccaggcacagctgcgcgaagctctcggtggcggtggaggaccccaaggcgggcggcggcggagccgtcttcgtgaaggccacgtggcaccccacgcgcttctccctcgccgtcaccgacggcggcgccgcgtgggtcgcccaggcctccgacgccgaggtgcgcctccgcgccgagcagtgggaccagcccgtcgccgactacctcgccctcgccgagcgctacctcgccttccagcagccctcctccacctactccttccacgacgccgccaacggcaatcgaaggctgtcatggacatttgagaaacaaggcaccaagttagaatggcgatggaaactgcagcctgcacctaacactcagcagactatagctgagatcttggattttcttatggatgcaaatatacgcttgagcgaagaggttgttaggaaaacacaatcctttgacaagttgaaacaagaatctgagaagtgcttgcaacaaagtgaaagatttaacattgagaaagctgagttcgaacaatccacattttcaaagtttgtggctgtcttaaattcgaagaaagccaagctcagacaactcaaggacaaactcacagaatttgaatctgctgacaaggctccaaaggaggaggatgagaactccactgataagacagagctttttgaggaagcaagtgacaaagatgcaagcgttaatgatgaaccctctgagactggtggcggcgatcttcatagctctcctgagaaaactgcagccacctccagaggggggaggggtcgcaagaggactagaaaatag</cdnaseq>

Protein Sequence

<aaseq>MATSTAAPRHSCAKLSVAVEDPKAGGGGAVFVKATWHPTRFSLA VTDGGAAWVAQASDAEVRLRAEQWDQPVADYLALAERYLAFQQPSSTYSFHDAANGNR RLSWTFEKQGTKLEWRWKLQPAPNTQQTIAEILDFLMDANIRLSEEVVRKTQSFDKLK QESEKCLQQSERFNIEKAEFEQSTFSKFVAVLNSKKAKLRQLKDKLTEFESADKAPKE EDENSTDKTELFEEASDKDASVNDEPSETGGGDLHSSPEKTAATSRGGRGRKRTRK</aaseq>

Gene Sequence

<dnaseqindica>64..372#1472..1600#1785..1907#2201..2464#atacgaattcaaagcccgcgtgttctcccgaacagccaccgccgccgccgccgccgccgatccatggcgacctcgacggcggcgcccaggcacagctgcgcgaagctctcggtggcggtggaggaccccaaggcgggcggcggcggagccgtcttcgtgaaggccacgtggcaccccacgcgcttctccctcgccgtcaccgacggcggcgccgcgtgggtcgcccaggcctccgacgccgaggtgcgcctccgcgccgagcagtgggaccagcccgtcgccgactacctcgccctcgccgagcgctacctcgccttccagcagccctcctccacctactccttccacgacgccgccaacggcaatcgaagggttcgttctttcttatccctttctttttttatctatatatggaagaatgctactgcttttagggcaagttggaagtagagcaatcgatatcatctttgtaactgtatggtaggattgttatttgatgctcacagtgtcacatttctctctcgcttacatgtgtatactgcaaggtccagcaatgtttgtttaggggcgaaacgacgcagtttgctggtaattttgtagctggagactgcatttagctcccgattgtagttcaccttcactcatccacgagtaatgcattcagtagttaatgttgattcttttacgaagttttgtgaagtatctgatctctatctcctcttttgcgctcaatctgggaagtaatttctgagcacgttgactgcggcgtaaagataatatttccccactctcttttattttttttttcacaatgcaagttgcttacaatctcttctgtttttggattttggccttaaggatatactcctaccaattagttatatggattaaattgtacacacccaattttgacgaagagtatgcttttatgcatagatgaactaaaatgcgaagaaattcctgtttgacattttatttaagtcggatacgaatatacacgtgttatctaatttttgtgctaactgtttctagcgttggaatggtgcctcatctcaaactttgcatataaaccaggatcagtctatcaagttattgtataatgatcacatcatgtaggactcagaatgcttccttctcttatattaatacataatgtttttaagacctcttaattgtttgagggttagcccttgcgcctcgacgatttactagaccctgattacttaaagtcactatctgttagggacaacatggattcccttgatgtcataatatcctaaatatgagcaccattgacgatatgatacatgattttcaaatggtgatgaaattatgttaaacacaagtagtactgctttacaggcatgtcttggtttatgaggagaccatttcatgtccttgcttgttttgtaccaaacacgtttttctccttttgtttcccgagttattgattatttatttttccatgtagctgtcatggacatttgagaaacaaggcaccaagttagaatggcgatggaaactgcagcctgcacctaacactcagcagactatagctgagatcttggattttcttatggatgcaaatatacgcttgagcgtatgtcactttccttttccattccatggatataatgctataatattttctatggaagtagtgaattgttgtcaagattccgatgaacttgattcgacctcactgcaacctaccaccaagtcatcttcatatatgatttacttgacctgaatgactaaactgttgccttcccttcatttttcaggaagaggttgttaggaaaacacaatcctttgacaagttgaaacaagaatctgagaagtgcttgcaacaaagtgaaagatttaacattgagaaagctgagttcgaacaatccacattttcaaaggtacattccctggtgtttgtgaaagacgaacatttcttgcagttcaaaaaatttcatcctttagccttgcttgtttgcatcatcacaaactattctcacggtgaacactatatgatgatattcacattctccccaattagttagctttgatattttgttccctctcgtggtcatattttgactttggcatttagtgattttctcattcagttattagttgactggaactcaagaaaactgtatattgagcttaccatagtagttctctactcactgttgtgtcatgtctctagtttgtggctgtcttaaattcgaagaaagccaagctcagacaactcaaggacaaactcacagaatttgaatctgctgacaaggctccaaaggaggaggatgagaactccactgataagacagagctttttgaggaagcaagtgacaaagatgcaagcgttaatgatgaaccctctgagactggtggcggcgatcttcatagctctcctgagaaaactgcagccacctccagaggggggaggggtcgcaagaggactagaaaatagcctgaacaagcaacctaactgctagactgaatatgacagtataacaagacctacatgcgaattcttaatgttaaggatatcaacaggacctacatgggagttcttaatatccttaacacttaatccatgtgatatccttaacacttaatccatgtgatgcatctgtcatgcaactaattttcatttcgtcaagtgtgtcaatcatgtaccttgtgaacatttaagtgcatgtggagctaaaccttgagtcct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0740800, RefSeq:Os03g0740800